CX306418

Overview
NameCX306418
Unique NameCX306418
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length515
Libraries
Library NameType
Drought1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX306418 vs. ExPASy Swiss-Prot
Match: ACCO1_CUCME (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Cucumis melo GN=ACO1 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.429e-17
Identity = 48/128 (37.50%), Postives = 74/128 (57.81%), Query Frame = -1
Query:  147 GITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELI----SPEKPARFRQLTYTDYVTRFFTKQLDGK 515
            G+ +HTD G + +L QDDK  GLQ+     W+DV P+  A+V+N+GD L++++N  Y SV HRVL  +S   R+SIA F+NP   D++  P P L+      EK   + +  + DY+  +   +   K
Sbjct:  173 GLRAHTDAGGIILLFQDDKVSGLQLLKDGNWIDVPPMRHAIVVNLGDQLEVITNGRYKSVMHRVLTQTSGTGRMSIASFYNPGS-DAVIYPAPALVEKDQDEEKKEVYPKFVFEDYMKLYLGVKFQAK 299          
BLAST of CX306418 vs. ExPASy Swiss-Prot
Match: FL3H_MALDO (Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.172e-17
Identity = 48/123 (39.02%), Postives = 74/123 (60.16%), Query Frame = -1
Query:  153 GITSHTDPGPLTILLQDDKGGLQIKH--GEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQLTYTDYVTRFFTKQLD 515
            G+  HTDPG +T+LLQD  GGLQ     G+ W+ V+PV GA V+N+GD   ++SN  + + +H+ + NS+   R+SIA F NP++   +Y P   +   EKP     +TYT+   +  +K L+
Sbjct:  214 GLKRHTDPGTITLLLQDQVGGLQATRDDGKTWITVQPVEGAFVVNLGDHGHLLSNGRFKNADHQAVVNSN-SSRLSIATFQNPAQEAIVY-PL-SVREGEKPILEAPITYTEMYKKKMSKDLE 333          
BLAST of CX306418 vs. ExPASy Swiss-Prot
Match: ACCO2_DORSP (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Doritaenopsis sp. GN=ACO2 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.172e-17
Identity = 48/129 (37.21%), Postives = 78/129 (60.47%), Query Frame = -1
Query:  147 GITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELI-----SPEKPARFRQLTYTDYVTRFFTKQLDGK 515
            G+ +HTD G + +L QDDK  GLQ+    EW++V P+  ++V+NIGD L++++N +Y SV HRV+A +    R+SIA F+NP   D++  P P L+       EK   + +  + DY+  +  K+ + K
Sbjct:  177 GLRAHTDAGGIILLFQDDKVSGLQLLKDREWIEVPPLRYSIVVNIGDQLEVITNGKYKSVLHRVVAQTD-GNRMSIASFYNPGS-DAVIFPAPALVEKEAEEEEKKEIYPKFVFQDYMNLYIRKKFEAK 303          
BLAST of CX306418 vs. ExPASy Swiss-Prot
Match: LDOX_ARATH (Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 5.411e-17
Identity = 45/112 (40.18%), Postives = 69/112 (61.61%), Query Frame = -1
Query:  180 GITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQLTYTDYV 515
            G+ +HTD   LT +L +   GLQ+ +  +WV  K VP ++V++IGD L+I+SN +Y S+ HR L N   + RIS AVF  P +   +  P PE++S E PA+F   T+  ++
Sbjct:  228 GVEAHTDVSALTFILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKE-KVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHI 338          
BLAST of CX306418 vs. ExPASy Swiss-Prot
Match: FLS_EUSGR (Flavonol synthase/flavanone 3-hydroxylase OS=Eustoma grandiflorum GN=FLS PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 5.411e-17
Identity = 44/108 (40.74%), Postives = 65/108 (60.19%), Query Frame = -1
Query:  183 SHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQLTYTDY 506
            +HTD   +T+L+ ++  GLQ+     W D K +P AL+++IGD ++IMSN +Y SV HR   N   + R+S  VF  P   D   GP P+L++ E PA+F+   Y DY
Sbjct:  219 AHTDMSAITVLVPNEVPGLQVYKDGHWYDCKYIPNALIVHIGDQVEIMSNGKYKSVYHRTTVNKE-KTRMSWPVFLEPPP-DHEVGPIPKLVNEENPAKFKTKKYKDY 324          
BLAST of CX306418 vs. ExPASy Swiss-Prot
Match: ACCO4_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Solanum lycopersicum GN=ACO4 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 5.411e-17
Identity = 45/113 (39.82%), Postives = 73/113 (64.60%), Query Frame = -1
Query:  180 GITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQLTYTDYV 515
            G+ +HTD G + +L QDDK  GLQ+   E+W+DV P+  ++V+N+GD L++++N +Y SV HRV+A +    R+S+A F+NP   D++  P P LI   K   + +  + DY+
Sbjct:  173 GLRAHTDAGGIILLFQDDKVSGLQLLKDEQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQTD-GTRMSLASFYNPG-NDAVIYPAPSLIEESKQV-YPKFVFDDYM 282          
BLAST of CX306418 vs. ExPASy Swiss-Prot
Match: LDOX_MALDO (Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.206e-16
Identity = 43/112 (38.39%), Postives = 69/112 (61.61%), Query Frame = -1
Query:  180 GITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQLTYTDYV 515
            G+ +HTD   LT +L +   GLQ+ +  +WV  K VP ++V++IGD L+I+SN +Y S+ HR + N   + RIS AVF  P +   +  P PE +S ++PA F   T+ +++
Sbjct:  232 GVEAHTDVSALTFILHNMVPGLQLFYEGKWVTAKCVPNSIVMHIGDTLEILSNGKYKSILHRGMVNKE-KVRISWAVFCEPPKEKIILKPLPETVSEDEPAMFPPRTFAEHI 342          
BLAST of CX306418 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.206e-16
Identity = 46/126 (36.51%), Postives = 77/126 (61.11%), Query Frame = -1
Query:  147 GITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPAR--FRQLTYTDYVTRFFTKQLDGK 515
            G+ +HTD G + +L QDDK  GLQ+   ++W+DV P+  ++VIN+GD L++++N +Y SV HRV+A +    R+SIA F+NP   D++  P P L+  E   +  + +  + DY+  +   +   K
Sbjct:  173 GLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVVAQTD-GTRMSIASFYNPG-NDAVIYPAPALVEKEVEEKEVYPKFVFDDYMKLYAALKFQAK 296          
BLAST of CX306418 vs. ExPASy Swiss-Prot
Match: LDOX_PERFR (Leucoanthocyanidin dioxygenase OS=Perilla frutescens GN=ANS PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.574e-16
Identity = 45/122 (36.89%), Postives = 71/122 (58.20%), Query Frame = -1
Query:  150 GITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQLTYTDYVTRFFTKQLDG 515
            G  +HTD   LT +L +   GLQ+ + ++WV  K VP +++++IGD L+I+SN +Y S+ HR L N   + RIS AVF  P +   +  P PE +S  +P RF   T+  ++     ++ DG
Sbjct:  234 GWEAHTDVSALTFILHNMVPGLQLFYEDKWVTAKCVPNSIIMHIGDTLEILSNGKYKSILHRGLVNKE-KVRISWAVFCEPPKEKIVLQPLPETVSEVEPPRFPPRTFAQHLKHKLFRKTDG 354          
BLAST of CX306418 vs. ExPASy Swiss-Prot
Match: ACCO2_MALDO (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Malus domestica GN=ACO2 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.056e-16
Identity = 46/115 (40.00%), Postives = 72/115 (62.61%), Query Frame = -1
Query:  180 GITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELI--SPEKPARFRQLTYTDYV 515
            G+ +HTD G + +L QDDK  GLQ+    EW+DV PV  ++VIN+GD +++++N +Y S+ HRV+A S    R+SIA F+NP + D+   P P L+    E    + +  + DY+
Sbjct:  173 GLRAHTDAGGIILLFQDDKVSGLQLLKDGEWMDVPPVHHSIVINLGDQIEVITNGKYKSIMHRVIAQSD-GTRMSIASFYNPGD-DAFISPAPALLEEKSEVSPTYPKFLFDDYM 285          
The following BLAST results are available for this feature:
BLAST of CX306418 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
ACCO1_CUCME2.429e-1737.501-aminocyclopropane-1-carboxylate oxidase 1 OS=Cuc... [more]
FL3H_MALDO3.172e-1739.02Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus d... [more]
ACCO2_DORSP3.172e-1737.211-aminocyclopropane-1-carboxylate oxidase 2 OS=Dor... [more]
LDOX_ARATH5.411e-1740.18Leucoanthocyanidin dioxygenase OS=Arabidopsis thal... [more]
FLS_EUSGR5.411e-1740.74Flavonol synthase/flavanone 3-hydroxylase OS=Eusto... [more]
ACCO4_SOLLC5.411e-1739.821-aminocyclopropane-1-carboxylate oxidase 4 OS=Sol... [more]
LDOX_MALDO1.206e-1638.39Leucoanthocyanidin dioxygenase OS=Malus domestica ... [more]
ACCO_DIOKA1.206e-1636.511-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]
LDOX_PERFR1.574e-1636.89Leucoanthocyanidin dioxygenase OS=Perilla frutesce... [more]
ACCO2_MALDO2.056e-1640.001-aminocyclopropane-1-carboxylate oxidase 2 OS=Mal... [more]

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Properties
Property NameValue
Genbank descriptionC18017H01Rv Drought1 Citrus clementina cDNA clone C18017H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX306418 ID=CX306418; Name=CX306418; organism=Citrus clementina; type=EST; length=515bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGTTTCAATGAGACGAACAAT
TGAATTGTTATTCTTACGTAAGAATAGTTTATACAGGCACAAACAACCAG
ATTTACCAAGTTTTGTTTCTTACAGCCTATAGTAATTCACCAATGTTTTT
CCATCTAACTGTTTTGTGAAGAACCTTGTTACATAGTCTGTGTATGTGAG
CTGCCGAAAACGAGCTGGCTTCTCTGGGGATATCAGCTCCGGGAATGGTC
CATAAAGACTGTCCCTCTCGCTTGGATTGAAGAAAACAGCAATTGAGATT
CGTGGTTCCAGGGACGAATTAGCCAATACTCTATGCTCTACACTTATGTA
TTCATCATTGGACATAATCTGAAGTATATCCCCAATGTTAATAACCAGAG
CTCCTGGAACTGGTTTAACATCCACCCATTCCTCACCATGCTTAATTTGC
AGCCCACCTTTATCATCTTGCAACAAGATTGTCAATGGCCCTGGATCAGT
ATGAGATGTGATCCC
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