CX306418
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306418 vs. ExPASy Swiss-Prot
Match: ACCO1_BRAJU (1-aminocyclopropane-1-carboxylate oxidase OS=Brassica juncea GN=ACO PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.630e-13 Identity = 42/113 (37.17%), Postives = 65/113 (57.52%), Query Frame = -1 Query: 180 GITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQLTYTDYV 515 G+ +HTD G + +L QDDK GLQ+ +W+DV P+ ++VIN+GD L++++N Y S+ HRV+ R+SIA F+NP D+ P L K + + DY+ Sbjct: 176 GLRAHTDAGGIILLFQDDKVTGLQLLKDGDWIDVPPLNHSIVINLGDQLEVITNGRYKSMMHRVVTQKE-GNRMSIASFYNPGS-DAEISPASSLAC--KETEYPSFVFDDYM 284
BLAST of CX306418 vs. ExPASy Swiss-Prot
Match: GAO1B_WHEAT (Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.191e-13 Identity = 47/128 (36.72%), Postives = 64/128 (50.00%), Query Frame = -1 Query: 141 GITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQLTY---TDYVTRFFTKQLDGKTL 515 G H DP LTIL QD+ GGLQ+ W ++P A V+NIGD +SN Y S HR + NS + PR S+A F P E D + P L+ P + T+ D+ + + + D KTL Sbjct: 220 GTGPHCDPTSLTILHQDNVGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSKV-PRKSLAFFLCP-EMDKVVAPPGTLVDAANPRAYPDFTWRSLLDFTQKHY--RADMKTL 343
BLAST of CX306418 vs. ExPASy Swiss-Prot
Match: GAO1A_WHEAT (Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN=GA20ox1A PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.191e-13 Identity = 47/128 (36.72%), Postives = 64/128 (50.00%), Query Frame = -1 Query: 141 GITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQLTY---TDYVTRFFTKQLDGKTL 515 G H DP LTIL QD+ GGLQ+ W ++P A V+NIGD +SN Y S HR + NS + PR S+A F P E D + P L+ P + T+ D+ + + + D KTL Sbjct: 220 GTGPHCDPTSLTILHQDNVGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSRV-PRKSLAFFLCP-EMDKVVAPPGTLVDASNPRAYPDFTWRSLLDFTQKHY--RADMKTL 343
BLAST of CX306418 vs. ExPASy Swiss-Prot
Match: GAOX1_ARATH (Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 8.086e-13 Identity = 43/112 (38.39%), Postives = 60/112 (53.57%), Query Frame = -1 Query: 180 GITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQLTYTDYV 515 G H DP LTIL QD GLQ+ +W ++P P A V+NIGD +SND Y S HR + NS E R S+A F P ++D + P EL+ R+ T++ ++ Sbjct: 243 GTGPHCDPTSLTILHQDHVNGLQVFVENQWRSIRPNPKAFVVNIGDTFMALSNDRYKSCLHRAVVNSESE-RKSLAFFLCP-KKDRVVTPPRELLDSITSRRYPDFTWSMFL 352
BLAST of CX306418 vs. ExPASy Swiss-Prot
Match: GAO1D_WHEAT (Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 8.086e-13 Identity = 47/128 (36.72%), Postives = 64/128 (50.00%), Query Frame = -1 Query: 141 GITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQLTY---TDYVTRFFTKQLDGKTL 515 G H DP LTIL QD+ GGLQ+ W ++P A V+NIGD +SN Y S HR + NS + PR S+A F P E D + P L+ P + T+ D+ + + + D KTL Sbjct: 220 GTGPHCDPTSLTILHQDNVGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSRV-PRKSLAFFLCP-EMDKVVAPPGTLVDAANPRAYPDFTWRSLLDFTQKHY--RADMKTL 343
BLAST of CX306418 vs. ExPASy Swiss-Prot
Match: G2OX1_ARATH (Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA2OX1 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 1.801e-12 Identity = 42/131 (32.06%), Postives = 66/131 (50.38%), Query Frame = -1 Query: 126 GITSHTDPGPLTILLQDDKGGLQIKHGE-EWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQLTYTDYVTRFFTKQLDGKTLVNYYR 515 G HTDP +++L ++ GLQI + W+ V P + N+GD LQ+M+N + SV HRVLAN + R+S+ F PS + P LI E + + T+++Y + +L L + R Sbjct: 193 GFGEHTDPQIISVLRSNNTSGLQINLNDGSWISVPPDHTSFFFNVGDSLQVMTNGRFKSVRHRVLANCK-KSRVSMIYFAGPSLTQRI-APLTCLIDNEDERLYEEFTWSEYKNSTYNSRLSDNRLQQFER 321
BLAST of CX306418 vs. ExPASy Swiss-Prot
Match: G2OX_PHACN (Gibberellin 2-beta-dioxygenase OS=Phaseolus coccineus GN=GA2OX1 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.353e-12 Identity = 40/131 (30.53%), Postives = 73/131 (55.73%), Query Frame = -1 Query: 126 GITSHTDPGPLTILLQDDKGGLQIKHGE-EWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQLTYTDYVTRFFTKQLDGKTLVNYYR 515 G HTDP +++L + GLQI + WV V P + IN+GD LQ+M+N + SV+HRVLA+++ + R+S+ F P+ +++ P P ++ + +++ T+ +Y +T +L L + + Sbjct: 200 GFGEHTDPQIISVLRSNSTSGLQICLTDGTWVSVPPDQTSFFINVGDALQVMTNGRFKSVKHRVLADTT-KSRLSMIYFGGPALSENI-APLPSVMLKGEECLYKEFTWCEYKKAAYTSRLADNRLAPFQK 328
BLAST of CX306418 vs. ExPASy Swiss-Prot
Match: LDOX_VITVI (Leucoanthocyanidin dioxygenase OS=Vitis vinifera PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.241e-12 Identity = 43/124 (34.68%), Postives = 63/124 (50.81%), Query Frame = -1 Query: 198 GITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNP------------------SERDSLYGPFPELISPEKPARFRQL 515 G+ +HTD LT +L + GLQ+ + +WV K VP +++++IGD ++I+SN +Y S+ HR L N + RIS AVF P S S PFP + S R R+L Sbjct: 234 GVEAHTDVSALTFILHNMVPGLQLFYEGKWVTAKCVPNSIIMHIGDTIEILSNGKYKSILHRGLVNKE-KVRISWAVFCEPPKEKIILKAHCQRRCLRLSHHSSHLAPFPNIFSTSSSGRPRRL 356
BLAST of CX306418 vs. ExPASy Swiss-Prot
Match: G2OX2_ARATH (Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA2OX2 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.525e-11 Identity = 42/122 (34.43%), Postives = 67/122 (54.92%), Query Frame = -1 Query: 156 GITSHTDPGPLTILLQDDKGGLQI--KHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQLTYTDYVTRFFTKQL 515 G HTDP +++L ++ GLQI K G WV V P + IN+GD LQ+M+N + SV+HRVLA++ RIS+ F P + P P L+ + +++ T++ Y + + +L Sbjct: 203 GFGEHTDPQIISVLRSNNTAGLQICVKDGS-WVAVPPDHSSFFINVGDALQVMTNGRFKSVKHRVLADTR-RSRISMIYFGGPPLSQKI-APLPCLVPEQDDWLYKEFTWSQYKSSAYKSKL 321
BLAST of CX306418 vs. ExPASy Swiss-Prot
Match: G3OX3_ARATH (Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=At4g21690 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 9.885e-11 Identity = 39/116 (33.62%), Postives = 63/116 (54.31%), Query Frame = -1 Query: 180 GITSHTDPGPLTILLQDDKGGLQIK----HGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQLTYTDYV 515 G+ HTD LTIL Q + GL+I+ G W+ V+P+ G+LV+ +GD+ I+SN ++ S HR + N + R+S A F P + + GP P +R+L + +Y+ Sbjct: 222 GLAPHTDSSLLTILYQGNIPGLEIESPQEEGSRWIGVEPIEGSLVVIMGDLSHIISNGQFRSTMHRAVVNKT-HHRVSAAYFAGPPKNLQI-GPLTS--DKNHPPIYRRLIWEEYL 333 The following BLAST results are available for this feature:
BLAST of CX306418 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306418 ID=CX306418; Name=CX306418; organism=Citrus clementina; type=EST; length=515bpback to top |