CX306419
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_FRATM (Coproporphyrinogen-III oxidase, aerobic OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=hemF PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 3.317e-45 Identity = 82/157 (52.23%), Postives = 103/157 (65.61%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP+NPF PT H N+R F DA D P WWFGGG DLTP Y FEED H+H T K+ DK D T+YP+FKKWCD+YFY+KH FFDDLND + +F T+CANS + AYIPI+ +RK+ ++ +HK +Q RRG Sbjct: 94 FIATGLSLVIHPRNPFVPTSHANFRIFIADADTDNP----IWWFGGGFDLTPYYPFEEDAIHWHQTAKNICDKHDKTYYPKFKKWCDEYFYLKHRDECRGVGGLFFDDLNDKSFDECFNFVTDCANSYLDAYIPIVAQRKNIEYSQKHKDFQLYRRG 246
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_YEAST (Coproporphyrinogen-III oxidase OS=Saccharomyces cerevisiae GN=HEM13 PE=1 SV=2) HSP 1 Score: 180.644 bits (457), Expect = 4.332e-45 Identity = 77/159 (48.43%), Postives = 104/159 (65.41%), Query Frame = 3 Query: 81 IPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 + FFA G+S V+HP NP APT H NYRYFET + G P+ WWFGGG DLTP+Y++EED + FH K A DK D YPRFKKWCD+YFYI H FFDD ++ D + +L +C ++ + +Y+ I+++RKD P+T + + WQ +RRG Sbjct: 109 VKFFACGLSMVIHPVNPHAPTTHLNYRYFET---WNQDGTPQTWWFGGGADLTPSYLYEEDGQLFHQLHKDALDKHDTALYPRFKKWCDEYFYITHRKETRGIGGIFFDDYDERDPQEILKMVEDCFDAFLPSYLTIVKRRKDMPYTKEEQQWQAIRRG 264
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_FRATW (Coproporphyrinogen-III oxidase, aerobic OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=hemF PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 2.150e-44 Identity = 81/157 (51.59%), Postives = 102/157 (64.97%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP+NPF PT H N+R F A D P WWFGGG DLTP Y FEED H+H T K+ DK D T+YP+FKKWCD+YFY+KH FFDDLND + +F T+CANS + AYIPI+ +RK+ ++ +HK +Q RRG Sbjct: 94 FIATGLSLVIHPRNPFVPTSHANFRIFIAGADTDNP----IWWFGGGFDLTPYYPFEEDAIHWHQTAKNICDKHDKTYYPKFKKWCDEYFYLKHRDECRGVGGLFFDDLNDKSFDECFNFVTDCANSYLDAYIPIVAQRKNIEYSQKHKDFQLYRRG 246
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_FRATT (Coproporphyrinogen-III oxidase, aerobic OS=Francisella tularensis subsp. tularensis GN=hemF PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 2.150e-44 Identity = 81/157 (51.59%), Postives = 102/157 (64.97%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP+NPF PT H N+R F A D P WWFGGG DLTP Y FEED H+H T K+ DK D T+YP+FKKWCD+YFY+KH FFDDLND + +F T+CANS + AYIPI+ +RK+ ++ +HK +Q RRG Sbjct: 94 FIATGLSLVIHPRNPFVPTSHANFRIFIAGADTDNP----IWWFGGGFDLTPYYPFEEDAIHWHQTAKNICDKHDKTYYPKFKKWCDEYFYLKHRDECRGVGGLFFDDLNDKSFDECFNFVTDCANSYLDAYIPIVAQRKNIEYSQKHKDFQLYRRG 246
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_FRATO (Coproporphyrinogen-III oxidase, aerobic OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=hemF PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 2.150e-44 Identity = 81/157 (51.59%), Postives = 102/157 (64.97%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP+NPF PT H N+R F A D P WWFGGG DLTP Y FEED H+H T K+ DK D T+YP+FKKWCD+YFY+KH FFDDLND + +F T+CANS + AYIPI+ +RK+ ++ +HK +Q RRG Sbjct: 94 FIATGLSLVIHPRNPFVPTSHANFRIFIAGADTDNP----IWWFGGGFDLTPYYPFEEDAIHWHQTAKNICDKHDKTYYPKFKKWCDEYFYLKHRNEYRGVGGLFFDDLNDKSFDECFNFVTDCANSYLDAYIPIVAQRKNIEYSQKHKDFQLYRRG 246
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_FRATH (Coproporphyrinogen-III oxidase, aerobic OS=Francisella tularensis subsp. holarctica (strain LVS) GN=hemF PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 2.150e-44 Identity = 81/157 (51.59%), Postives = 102/157 (64.97%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP+NPF PT H N+R F A D P WWFGGG DLTP Y FEED H+H T K+ DK D T+YP+FKKWCD+YFY+KH FFDDLND + +F T+CANS + AYIPI+ +RK+ ++ +HK +Q RRG Sbjct: 94 FIATGLSLVIHPRNPFVPTSHANFRIFIAGADTDNP----IWWFGGGFDLTPYYPFEEDAIHWHQTAKNICDKHDKTYYPKFKKWCDEYFYLKHRDEYRGVGGLFFDDLNDKSFDECFNFVTDCANSYLDAYIPIVAQRKNIEYSQKHKDFQLYRRG 246
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_FRATF (Coproporphyrinogen-III oxidase, aerobic OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=hemF PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 2.150e-44 Identity = 81/157 (51.59%), Postives = 102/157 (64.97%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP+NPF PT H N+R F A D P WWFGGG DLTP Y FEED H+H T K+ DK D T+YP+FKKWCD+YFY+KH FFDDLND + +F T+CANS + AYIPI+ +RK+ ++ +HK +Q RRG Sbjct: 94 FIATGLSLVIHPRNPFVPTSHANFRIFIAGADTDNP----IWWFGGGFDLTPYYPFEEDAIHWHQTAKNICDKHDKTYYPKFKKWCDEYFYLKHRDEYRGVGGLFFDDLNDKSFDECFNFVTDCANSYLDAYIPIVAQRKNIEYSQKHKDFQLYRRG 246
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_FRAT1 (Coproporphyrinogen-III oxidase, aerobic OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=hemF PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 2.150e-44 Identity = 81/157 (51.59%), Postives = 102/157 (64.97%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP+NPF PT H N+R F A D P WWFGGG DLTP Y FEED H+H T K+ DK D T+YP+FKKWCD+YFY+KH FFDDLND + +F T+CANS + AYIPI+ +RK+ ++ +HK +Q RRG Sbjct: 94 FIATGLSLVIHPRNPFVPTSHANFRIFIAGADTDNP----IWWFGGGFDLTPYYPFEEDAIHWHQTAKNICDKHDKTYYPKFKKWCDEYFYLKHRDECRGVGGLFFDDLNDKSFDECFNFVTDCANSYLDAYIPIVAQRKNIEYSQKHKDFQLYRRG 246
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_FRATN (Coproporphyrinogen-III oxidase, aerobic OS=Francisella tularensis subsp. novicida (strain U112) GN=hemF PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 4.790e-44 Identity = 81/157 (51.59%), Postives = 102/157 (64.97%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP+NPF PT H N+R F A DTP WWFGGG DLTP Y FEED H+H T K+ DK D T+Y +FKKWCD+YFY+KH FFDDLND + +F T+CANS + AYIPI+ +RK+ ++ +HK +Q RRG Sbjct: 94 FIATGLSLVIHPRNPFVPTSHANFRIFIAGADTDTP----IWWFGGGFDLTPYYPFEEDAIHWHQTAKNICDKHDKTYYSKFKKWCDEYFYLKHRDECRGVGGLFFDDLNDKSFDECFNFVTDCANSYLDAYIPIVAQRKNIEYSQKHKDFQLYRRG 246
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_FRAP2 (Coproporphyrinogen-III oxidase, aerobic OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=hemF PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 2.377e-43 Identity = 81/157 (51.59%), Postives = 100/157 (63.69%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP+NPF PT H N+R F A D P WWFGGG DLTP Y FEED H+H T K+ DK D ++YP FKK CD+YFY+KH FFDDLND + F T+CANS + AYIPI+EKRK+ ++ +HK +Q RRG Sbjct: 94 FIATGVSLVIHPRNPFVPTSHANFRIFVAGADTDNP----IWWFGGGFDLTPYYPFEEDAIHWHQTAKNICDKHDASYYPSFKKLCDEYFYLKHRDECRGVGGLFFDDLNDKSFDECFKFVTDCANSYLDAYIPIVEKRKNIEYSQKHKDFQLYRRG 246 The following BLAST results are available for this feature:
BLAST of CX306419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306419 ID=CX306419; Name=CX306419; organism=Citrus clementina; type=EST; length=558bpback to top |