CX306419
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_SHISS (Coproporphyrinogen-III oxidase, aerobic OS=Shigella sonnei (strain Ss046) GN=hemF PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.544e-34 Identity = 70/157 (44.59%), Postives = 89/157 (56.69%), Query Frame = 3
Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557
F A G+S V+HP NP+ PT H N R+F + P GA WWFGGG DLTP Y FEED H+H T + F YPR+KKWCDDYFY+KH FFDDLN D + +F AY+PI+E+RK + ++ + +Q RRG
Sbjct: 86 FEAMGVSLVVHPHNPYVPTSHANVRFFIAEKP----GAEPVWWFGGGFDLTPFYGFEEDAIHWHRTARDLCLPFGEDVYPRYKKWCDDYFYLKHRNEQRGIGGLFFDDLNTPDFDHCFAFMQAVGKGYTDAYLPIVERRKAMAYGERERNFQLYRRG 238
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_SHIBS (Coproporphyrinogen-III oxidase, aerobic OS=Shigella boydii serotype 4 (strain Sb227) GN=hemF PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.544e-34 Identity = 70/157 (44.59%), Postives = 89/157 (56.69%), Query Frame = 3
Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557
F A G+S V+HP NP+ PT H N R+F + P GA WWFGGG DLTP Y FEED H+H T + F YPR+KKWCDDYFY+KH FFDDLN D + +F AY+PI+E+RK + ++ + +Q RRG
Sbjct: 86 FEAMGVSLVVHPHNPYVPTSHANVRFFIAEKP----GAEPVWWFGGGFDLTPFYGFEEDAIHWHRTARDLCLPFGEDVYPRYKKWCDDYFYLKHRNEQRGIGGLFFDDLNTPDFDHCFAFMQAVGKGYTDAYLPIVERRKAMAYGERERNFQLYRRG 238
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_SHIB3 (Coproporphyrinogen-III oxidase, aerobic OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=hemF PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.544e-34 Identity = 70/157 (44.59%), Postives = 89/157 (56.69%), Query Frame = 3
Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557
F A G+S V+HP NP+ PT H N R+F + P GA WWFGGG DLTP Y FEED H+H T + F YPR+KKWCDDYFY+KH FFDDLN D + +F AY+PI+E+RK + ++ + +Q RRG
Sbjct: 86 FEAMGVSLVVHPHNPYVPTSHANVRFFIAEKP----GAEPVWWFGGGFDLTPFYGFEEDAIHWHRTARDLCLPFGEDVYPRYKKWCDDYFYLKHRNEQRGIGGLFFDDLNTPDFDHCFAFMQAVGKGYTDAYLPIVERRKAMAYGERERNFQLYRRG 238
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_ECO8A (Coproporphyrinogen-III oxidase, aerobic OS=Escherichia coli O8 (strain IAI1) GN=hemF PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.544e-34 Identity = 70/157 (44.59%), Postives = 89/157 (56.69%), Query Frame = 3
Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557
F A G+S V+HP NP+ PT H N R+F + P GA WWFGGG DLTP Y FEED H+H T + F YPR+KKWCDDYFY+KH FFDDLN D + +F AY+PI+E+RK + ++ + +Q RRG
Sbjct: 86 FEAMGVSLVVHPHNPYVPTSHANVRFFIAEKP----GAEPVWWFGGGFDLTPFYGFEEDAIHWHRTARDLCLPFGEDVYPRYKKWCDDYFYLKHRNEQRGIGGLFFDDLNTPDFDHCFAFMQAVGKGYTDAYLPIVERRKAMAYGERERNFQLYRRG 238
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_ECO5E (Coproporphyrinogen-III oxidase, aerobic OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=hemF PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.544e-34 Identity = 70/157 (44.59%), Postives = 89/157 (56.69%), Query Frame = 3
Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557
F A G+S V+HP NP+ PT H N R+F + P GA WWFGGG DLTP Y FEED H+H T + F YPR+KKWCDDYFY+KH FFDDLN D + +F AY+PI+E+RK + ++ + +Q RRG
Sbjct: 86 FEAMGVSLVVHPHNPYVPTSHANVRFFIAEKP----GAEPVWWFGGGFDLTPFYGFEEDAIHWHRTARDLCLPFGKDVYPRYKKWCDDYFYLKHRNEQRGIGGLFFDDLNTPDFDHCFAFMQAVGKGYTDAYLPIVERRKAMAYGERERNFQLYRRG 238
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_ECO57 (Coproporphyrinogen-III oxidase, aerobic OS=Escherichia coli O157:H7 GN=hemF PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.544e-34 Identity = 70/157 (44.59%), Postives = 89/157 (56.69%), Query Frame = 3
Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557
F A G+S V+HP NP+ PT H N R+F + P GA WWFGGG DLTP Y FEED H+H T + F YPR+KKWCDDYFY+KH FFDDLN D + +F AY+PI+E+RK + ++ + +Q RRG
Sbjct: 86 FEAMGVSLVVHPHNPYVPTSHANVRFFIAEKP----GAEPVWWFGGGFDLTPFYGFEEDAIHWHRTARDLCLPFGKDVYPRYKKWCDDYFYLKHRNEQRGIGGLFFDDLNTPDFDHCFAFMQAVGKGYTDAYLPIVERRKAMAYGERERNFQLYRRG 238
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_ECO24 (Coproporphyrinogen-III oxidase, aerobic OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=hemF PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.544e-34 Identity = 70/157 (44.59%), Postives = 89/157 (56.69%), Query Frame = 3
Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557
F A G+S V+HP NP+ PT H N R+F + P GA WWFGGG DLTP Y FEED H+H T + F YPR+KKWCDDYFY+KH FFDDLN D + +F AY+PI+E+RK + ++ + +Q RRG
Sbjct: 86 FEAMGVSLVVHPHNPYVPTSHANVRFFIAEKP----GAEPVWWFGGGFDLTPFYGFEEDAIHWHRTARDLCLPFGEDVYPRYKKWCDDYFYLKHRNEQRGIGGLFFDDLNTPDFDHCFAFMQAVGKGYTDAYLPIVERRKAMAYGERERNFQLYRRG 238
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_PSEPK (Coproporphyrinogen-III oxidase, aerobic OS=Pseudomonas putida (strain KT2440) GN=hemF PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.017e-34 Identity = 67/157 (42.68%), Postives = 92/157 (58.60%), Query Frame = 3
Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557
F A G+S V+HP NP PT H N R+F + G WWFGGG DLTP Y EED H+H + A F YPR+K WCD YF++KH FFDDLN++D + +F ++ + AY+PI+++RK+TP+T Q + +Q+ RRG
Sbjct: 87 FEALGVSLVIHPHNPHVPTSHANVRFFIAEKE----GEEAVWWFGGGFDLTPYYGNEEDCIHWHRVAEQACAPFGADVYPRYKAWCDRYFHLKHRGEPRGIGGLFFDDLNEWDFDTCFAFIRAIGDAFVDAYLPIVQRRKNTPYTPQQREFQEYRRG 239
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_ECO7I (Coproporphyrinogen-III oxidase, aerobic OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=hemF PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.017e-34 Identity = 69/157 (43.95%), Postives = 89/157 (56.69%), Query Frame = 3
Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557
F A G+S V+HP NP+ PT H N R+F + P GA WWFGGG DLTP Y FEED H+H T + F YPR+KKWCD+YFY+KH FFDDLN D + +F AY+PI+E+RK + ++ + +Q RRG
Sbjct: 86 FEAMGVSLVVHPHNPYVPTSHANVRFFIAEKP----GAEPVWWFGGGFDLTPFYGFEEDAIHWHRTARDLCLPFGEDVYPRYKKWCDEYFYLKHRNEQRGIGGLFFDDLNTPDFDHCFAFMQAVGKGYTNAYLPIVERRKTMAYGERERNFQLYRRG 238
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_YERPY (Coproporphyrinogen-III oxidase, aerobic OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=hemF PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.634e-34 Identity = 70/157 (44.59%), Postives = 87/157 (55.41%), Query Frame = 3
Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557
F A G+S V+HP NP+ PT H N R+F + P G WWFGGG DLTP Y FEED H+H S F YPR+KKWCDDYFYIKH FFDDLN D +F + + AY+PI+ +RK + D+ + +Q RRG
Sbjct: 88 FQALGVSLVIHPLNPYLPTSHANVRFFIAEKP----GEDAVWWFGGGFDLTPYYGFEEDAIHWHQVAHSLCQPFGEQIYPRYKKWCDDYFYIKHRQEARGIGGLFFDDLNSPDFMTCFNFTQAVGDGFLAAYMPIVARRKALGWGDRERQFQLYRRG 240 The following BLAST results are available for this feature:
BLAST of CX306419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306419 ID=CX306419; Name=CX306419; organism=Citrus clementina; type=EST; length=558bpback to top |