CX306419
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_YERPS (Coproporphyrinogen-III oxidase, aerobic OS=Yersinia pseudotuberculosis GN=hemF PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.634e-34 Identity = 70/157 (44.59%), Postives = 87/157 (55.41%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP NP+ PT H N R+F + P G WWFGGG DLTP Y FEED H+H S F YPR+KKWCDDYFYIKH FFDDLN D +F + + AY+PI+ +RK + D+ + +Q RRG Sbjct: 88 FQALGVSLVIHPLNPYLPTSHANVRFFIAEKP----GEDAVWWFGGGFDLTPYYGFEEDAIHWHQVAHSLCQPFGEQIYPRYKKWCDDYFYIKHRQEARGIGGLFFDDLNSPDFMTCFNFTQAVGDGFLAAYMPIVARRKALGWGDRERQFQLYRRG 240
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_YERPP (Coproporphyrinogen-III oxidase, aerobic OS=Yersinia pestis (strain Pestoides F) GN=hemF PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.634e-34 Identity = 70/157 (44.59%), Postives = 87/157 (55.41%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP NP+ PT H N R+F + P G WWFGGG DLTP Y FEED H+H S F YPR+KKWCDDYFYIKH FFDDLN D +F + + AY+PI+ +RK + D+ + +Q RRG Sbjct: 88 FQALGVSLVIHPLNPYLPTSHANVRFFIAEKP----GEDAVWWFGGGFDLTPYYGFEEDAIHWHQVAHSLCQPFGEQIYPRYKKWCDDYFYIKHRQEARGIGGLFFDDLNSPDFMTCFNFTQAVGDGFLAAYMPIVARRKALGWGDRERQFQLYRRG 240
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_YERPN (Coproporphyrinogen-III oxidase, aerobic OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=hemF PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.634e-34 Identity = 70/157 (44.59%), Postives = 87/157 (55.41%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP NP+ PT H N R+F + P G WWFGGG DLTP Y FEED H+H S F YPR+KKWCDDYFYIKH FFDDLN D +F + + AY+PI+ +RK + D+ + +Q RRG Sbjct: 88 FQALGVSLVIHPLNPYLPTSHANVRFFIAEKP----GEDAVWWFGGGFDLTPYYGFEEDAIHWHQVAHSLCQPFGEQIYPRYKKWCDDYFYIKHRQEARGIGGLFFDDLNSPDFMTCFNFTQAVGDGFLAAYMPIVARRKALGWGDRERQFQLYRRG 240
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_YERPG (Coproporphyrinogen-III oxidase, aerobic OS=Yersinia pestis bv. Antiqua (strain Angola) GN=hemF PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.634e-34 Identity = 70/157 (44.59%), Postives = 87/157 (55.41%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP NP+ PT H N R+F + P G WWFGGG DLTP Y FEED H+H S F YPR+KKWCDDYFYIKH FFDDLN D +F + + AY+PI+ +RK + D+ + +Q RRG Sbjct: 88 FQALGVSLVIHPLNPYLPTSHANVRFFIAEKP----GEDAVWWFGGGFDLTPYYGFEEDAIHWHQVAHSLCQPFGEQIYPRYKKWCDDYFYIKHRQEARGIGGLFFDDLNSPDFMTCFNFTQAVGDGFLAAYMPIVARRKALGWGDRERQFQLYRRG 240
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_YERPE (Coproporphyrinogen-III oxidase, aerobic OS=Yersinia pestis GN=hemF PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.634e-34 Identity = 70/157 (44.59%), Postives = 87/157 (55.41%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP NP+ PT H N R+F + P G WWFGGG DLTP Y FEED H+H S F YPR+KKWCDDYFYIKH FFDDLN D +F + + AY+PI+ +RK + D+ + +Q RRG Sbjct: 88 FQALGVSLVIHPLNPYLPTSHANVRFFIAEKP----GEDAVWWFGGGFDLTPYYGFEEDAIHWHQVAHSLCQPFGEQIYPRYKKWCDDYFYIKHRQEARGIGGLFFDDLNSPDFMTCFNFTQAVGDGFLAAYMPIVARRKALGWGDRERQFQLYRRG 240
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_YERPB (Coproporphyrinogen-III oxidase, aerobic OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=hemF PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.634e-34 Identity = 70/157 (44.59%), Postives = 87/157 (55.41%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP NP+ PT H N R+F + P G WWFGGG DLTP Y FEED H+H S F YPR+KKWCDDYFYIKH FFDDLN D +F + + AY+PI+ +RK + D+ + +Q RRG Sbjct: 88 FQALGVSLVIHPLNPYLPTSHANVRFFIAEKP----GEDAVWWFGGGFDLTPYYGFEEDAIHWHQVAHSLCQPFGEQIYPRYKKWCDDYFYIKHRQEARGIGGLFFDDLNSPDFMTCFNFTQAVGDGFLAAYMPIVARRKALGWGDRERQFQLYRRG 240
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_YERPA (Coproporphyrinogen-III oxidase, aerobic OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=hemF PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.634e-34 Identity = 70/157 (44.59%), Postives = 87/157 (55.41%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP NP+ PT H N R+F + P G WWFGGG DLTP Y FEED H+H S F YPR+KKWCDDYFYIKH FFDDLN D +F + + AY+PI+ +RK + D+ + +Q RRG Sbjct: 88 FQALGVSLVIHPLNPYLPTSHANVRFFIAEKP----GEDAVWWFGGGFDLTPYYGFEEDAIHWHQVAHSLCQPFGEQIYPRYKKWCDDYFYIKHRQEARGIGGLFFDDLNSPDFMTCFNFTQAVGDGFLAAYMPIVARRKALGWGDRERQFQLYRRG 240
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_YERP3 (Coproporphyrinogen-III oxidase, aerobic OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=hemF PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.634e-34 Identity = 70/157 (44.59%), Postives = 87/157 (55.41%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP NP+ PT H N R+F + P G WWFGGG DLTP Y FEED H+H S F YPR+KKWCDDYFYIKH FFDDLN D +F + + AY+PI+ +RK + D+ + +Q RRG Sbjct: 88 FQALGVSLVIHPLNPYLPTSHANVRFFIAEKP----GEDAVWWFGGGFDLTPYYGFEEDAIHWHQVAHSLCQPFGEQIYPRYKKWCDDYFYIKHRQEARGIGGLFFDDLNSPDFMTCFNFTQAVGDGFLAAYMPIVARRKALGWGDRERQFQLYRRG 240
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_PSEPF (Coproporphyrinogen-III oxidase, aerobic OS=Pseudomonas fluorescens (strain Pf0-1) GN=hemF PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.634e-34 Identity = 68/157 (43.31%), Postives = 92/157 (58.60%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP NP PT H N R+F + + P WWFGGG DLTP Y EED H+H + A F P YPR+K WCD YF+IKH FFDDLN++D + +F ++ I AY+PI+++RK+ FT + + +Q+ RRG Sbjct: 87 FEALGVSLVIHPHNPHVPTSHANVRFFIAEKEGEEP----VWWFGGGFDLTPYYGNEEDCIHWHRVAEKACAPFGPDVYPRYKAWCDTYFHIKHRHEPRGIGGLFFDDLNEWDFDTSFAFMRAIGDAYIDAYLPIVQRRKNDAFTARQREFQEFRRG 239
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_ECOLI (Coproporphyrinogen-III oxidase, aerobic OS=Escherichia coli (strain K12) GN=hemF PE=1 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 3.441e-34 Identity = 69/157 (43.95%), Postives = 89/157 (56.69%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP NP+ PT H N R+F + P GA WWFGGG DLTP Y FEED H+H T + F YPR+KKWCD+YFY+KH FFDDLN D + +F AY+PI+E+RK + ++ + +Q RRG Sbjct: 86 FEAMGVSLVVHPHNPYVPTSHANVRFFIAEKP----GADPVWWFGGGFDLTPFYGFEEDAIHWHRTARDLCLPFGEDVYPRYKKWCDEYFYLKHRNEQRGIGGLFFDDLNTPDFDRCFAFMQAVGKGYTDAYLPIVERRKAMAYGERERNFQLYRRG 238 The following BLAST results are available for this feature:
BLAST of CX306419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306419 ID=CX306419; Name=CX306419; organism=Citrus clementina; type=EST; length=558bpback to top |