CX306419
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_PSEU2 (Coproporphyrinogen-III oxidase, aerobic OS=Pseudomonas syringae pv. syringae (strain B728a) GN=hemF PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 2.466e-32 Identity = 65/157 (41.40%), Postives = 87/157 (55.41%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP NP PT H N R+F + G WWFGGG DLTP Y EED H+H + A F YPR+K WCD YF++KH FFDD+N +D + +F ++ I AY+PI+ +RK +T Q + +Q+ RRG Sbjct: 87 FEALGVSLVIHPHNPHVPTSHANVRFFIAEKE----GEEAVWWFGGGFDLTPYYGVEEDCVHWHRVAERACAPFGEDVYPRYKAWCDSYFHLKHRDEPRGIGGLFFDDVNQWDFDTSFAFIRAIGDAFINAYLPIVRRRKAAAYTVQQREFQEFRRG 239
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_PSEF5 (Coproporphyrinogen-III oxidase, aerobic OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=hemF PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 2.466e-32 Identity = 65/157 (41.40%), Postives = 89/157 (56.69%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP NP PT H N R+F + + P WWFGGG DLTP Y +D H+H + A F YPR+K WCD YF+IKH FFDDLN++D + +F ++ I AY+PI+++RK +T Q + +Q+ RRG Sbjct: 87 FEALGVSLVIHPHNPHVPTSHANVRFFIAEKEGEEP----VWWFGGGFDLTPYYGNIDDCVHWHRVAERACAPFGADVYPRYKAWCDSYFHIKHRNEPRGIGGLFFDDLNEWDFDTSFAFMRAIGDAYIEAYLPIVQRRKAAAYTAQQREFQEFRRG 239
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_SHEDO (Coproporphyrinogen-III oxidase, aerobic OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=hemF PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 3.220e-32 Identity = 69/157 (43.95%), Postives = 87/157 (55.41%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP NP+ PT H N R+F A K+ GA WWFGGG DLTP Y F+EDV +H T F YP++KKWCDDYF++ H FFDDLN E +F I+AY PI+E+RK F + + +Q RRG Sbjct: 88 FEAMGVSLVIHPNNPYIPTTHANVRFFI--ASKE--GADPVWWFGGGFDLTPYYPFKEDVLSWHQTAADLCAPFGEEVYPKYKKWCDDYFFLPHRNETRGVGGLFFDDLNQAGFEQSFAFMRAVGEGFIQAYAPIVERRKALSFGEHERQFQLYRRG 240
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_CHRSD (Coproporphyrinogen-III oxidase, aerobic OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=hemF PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 3.220e-32 Identity = 64/157 (40.76%), Postives = 89/157 (56.69%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S VLHP+NP PT H N R+F + GA WWFGGG DLTP Y EDV H+H + F YPRFK+WCD+YF + H FFDDLN+++ E +F ++ + AY+PI+ +R+ T + ++ + +Q RRG Sbjct: 88 FHAVGVSWVLHPRNPHVPTAHGNVRFFIAEKE----GAEPVWWFGGGFDLTPFYPVFEDVVHWHRVAQETCAPFGDDVYPRFKRWCDEYFTLHHRDETRGVGGLFFDDLNEWEFERCFAFQRAVGDAFLEAYVPIVRRRQATEYGERERDFQAFRRG 240
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_AERHH (Coproporphyrinogen-III oxidase, aerobic OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=hemF PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 3.220e-32 Identity = 64/157 (40.76%), Postives = 86/157 (54.78%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP NP+ PT H N R+F + + P WWFGGG DLTP Y FEEDV+H+H + F YP FK WCD YF++KH FFDDLN + +F + AY+PI+E+RK + ++ + +Q RRG Sbjct: 88 FEAMGVSLVIHPHNPYVPTSHANVRFFIAEKEGEEP----IWWFGGGFDLTPFYPFEEDVRHWHQLSRDLCQPFGTDIYPEFKSWCDRYFFLKHRDETRGVGGLFFDDLNRWPFADCFAFMQAVGKGYLDAYLPIVERRKALAYGEREREFQLYRRG 240
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_PSESM (Coproporphyrinogen-III oxidase, aerobic OS=Pseudomonas syringae pv. tomato GN=hemF PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 4.206e-32 Identity = 64/157 (40.76%), Postives = 88/157 (56.05%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP +P PT H N R+F + + P WWFGGG DLTP Y EED H+H + A F YPR+K WCD YF++KH FFDD+N +D + +F ++ I AY+PI+ +RK +T Q + +Q+ RRG Sbjct: 87 FEALGVSLVIHPHSPHVPTSHANVRFFIAEKEGEEP----VWWFGGGFDLTPYYGVEEDCVHWHRVAERACAPFGDDVYPRYKAWCDSYFHLKHRDEPRGIGGLFFDDVNQWDFDTSFAFIRAIGDAFINAYLPIVRRRKAAAYTVQQREFQEFRRG 239
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_CHRVO (Coproporphyrinogen-III oxidase, aerobic OS=Chromobacterium violaceum GN=hemF PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 4.206e-32 Identity = 63/157 (40.13%), Postives = 89/157 (56.69%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP NP PT H N R+F + + P WWFGGG DLTP Y EED H+H+ + F YPR+KKWCD+YF++KH FFDDLN++ + +F + + AY+PI+ +RK+ + D+ + +Q RRG Sbjct: 88 FEAMGVSLVIHPSNPHVPTSHANVRFFIAEKDGEAP----VWWFGGGFDLTPFYPQEEDAVHWHTVARDLCAPFGGDVYPRYKKWCDEYFHLKHRNEARGIGGLFFDDLNEWGFDKSFAFTRAVGDGYLDAYLPIVARRKEQAWGDRERQFQLYRRG 240
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_SHEWM (Coproporphyrinogen-III oxidase, aerobic OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=hemF PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 5.493e-32 Identity = 67/157 (42.68%), Postives = 89/157 (56.69%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP NP+ PT H N R+F A K+ GA WWFGGG DLTP Y F+EDV +H F YP++KKWCDDYFY+ H FFDDLN + +F N + AY PI+++RK+T + ++ + +Q RRG Sbjct: 88 FEAMGVSLVIHPNNPYIPTTHANVRFFI--AKKE--GADPVWWFGGGFDLTPYYPFKEDVIEWHQNAHDLCLPFGEEVYPKYKKWCDDYFYLPHRDETRGVGGLFFDDLNAEGFDTSFAFMQAVGNGFLTAYAPIVQRRKETQYGEREREFQLYRRG 240
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_RALPJ (Coproporphyrinogen-III oxidase, aerobic OS=Ralstonia pickettii (strain 12J) GN=hemF PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 7.174e-32 Identity = 65/157 (41.40%), Postives = 85/157 (54.14%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V HP+NP+ PT+H N R F P WWFGGG DLTP Y F ED HFH T + A + YPRFK+WCDDYFY+KH FFDD + E ++ + A++PI E+R T + ++ +A+Q RRG Sbjct: 88 FEAMGVSLVFHPRNPYVPTVHMNVRCFVAVRSDAAP----VWWFGGGMDLTPYYGFTEDASHFHRTCQGALAPYGDELYPRFKQWCDDYFYLKHRKEARGIGGIFFDDFAELGFERSFEMMRSVGDAFLPAWLPIAEQRHATAYGERERAFQAYRRG 240
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_BURPP (Coproporphyrinogen-III oxidase, aerobic OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=hemF PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 9.370e-32 Identity = 62/157 (39.49%), Postives = 88/157 (56.05%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S VLHP NP PT+H N R P + P +WFGGG DLTP Y +EED +HFH T + A + YP FK+WCD+YF++KH FFDD + + + ++ ++AY+PI+EKR++ P+ + +Q RRG Sbjct: 93 FEAMGVSLVLHPHNPHCPTVHMNVRLLIATKPGEEP----VFWFGGGMDLTPYYGYEEDARHFHRTCRDALQPYGADLYPSFKRWCDEYFFLKHRNEARGIGGIFFDDFSAPGFDQSFAMLKSVGDAFLKAYLPIVEKRRNIPYGQAERDFQAYRRG 245 The following BLAST results are available for this feature:
BLAST of CX306419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306419 ID=CX306419; Name=CX306419; organism=Citrus clementina; type=EST; length=558bpback to top |