CX306419
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_VIBSL (Coproporphyrinogen-III oxidase, aerobic OS=Vibrio splendidus (strain LGP32) GN=hemF PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.087e-31 Identity = 63/157 (40.13%), Postives = 87/157 (55.41%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HPKNP+ PT H N R+F + + P WWFGGG DLTP Y +ED + +H T K F Y K+WCD YFY+ H FFDDLN++ E ++ AY+PI+E+RK+TP+ ++ + +Q RRG Sbjct: 92 FEAMGVSLVIHPKNPYIPTSHANVRFFIAEKEGEDP----IWWFGGGFDLTPFYPVDEDCQSWHQTAKDLCAPFGDDVYQEHKEWCDKYFYLPHRDETRGVGGLFFDDLNEWGFEKSFAYMQAVGEGFAAAYLPIVERRKETPYGERERDFQLYRRG 244
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_VIBVY (Coproporphyrinogen-III oxidase, aerobic OS=Vibrio vulnificus (strain YJ016) GN=hemF PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 2.726e-31 Identity = 63/157 (40.13%), Postives = 86/157 (54.78%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP NP+ PT H N R+F + + P WWFGGG DLTP Y FEED + +H+T K F Y + K WCDDYFY+ H FFDDLN ++ + + AY+PI+E+RK T + ++ + +Q RRG Sbjct: 92 FEAMGVSLVMHPHNPYVPTSHANVRFFIAEKEGEAP----IWWFGGGFDLTPFYPFEEDCQFWHNTAKEVCAPFGADVYAQHKAWCDDYFYLPHRGETRGIGGLFFDDLNQWEFDKCFDYIKAVGEGYCDAYLPIVERRKVTEYGEREREFQLYRRG 244
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_VIBVU (Coproporphyrinogen-III oxidase, aerobic OS=Vibrio vulnificus GN=hemF PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 2.726e-31 Identity = 63/157 (40.13%), Postives = 86/157 (54.78%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP NP+ PT H N R+F + + P WWFGGG DLTP Y FEED + +H+T K F Y + K WCDDYFY+ H FFDDLN ++ + + AY+PI+E+RK T + ++ + +Q RRG Sbjct: 92 FEAMGVSLVMHPHNPYVPTSHANVRFFIAEKEGEAP----IWWFGGGFDLTPFYPFEEDCQFWHNTAKEVCAPFGADVYAQHKAWCDDYFYLPHRGETRGIGGLFFDDLNQWEFDKCFDYIKAVGEGYCDAYLPIVERRKVTEYGEREREFQLYRRG 244
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_VIBHB (Coproporphyrinogen-III oxidase, aerobic OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=hemF PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 2.726e-31 Identity = 62/157 (39.49%), Postives = 85/157 (54.14%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HPKNP+ PT H N R+F + + P WWFGGG DLTP Y F+ED + +H T K F YP K WCD YF++ H FFDDLN ++ + + +AY+PI+ +RKD F ++ + +Q RRG Sbjct: 92 FEAMGVSLVIHPKNPYVPTSHANVRFFIAEKDGEDP----IWWFGGGFDLTPFYPFDEDCQSWHDTAKQLCAPFGDEVYPEHKAWCDKYFFLPHRNETRGVGGLFFDDLNQWEFDKCFDYIKAVGEGYCQAYLPIVSRRKDIEFGEREREFQLYRRG 244
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_PROM1 (Coproporphyrinogen-III oxidase, aerobic OS=Prochlorococcus marinus (strain NATL1A) GN=hemF PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 2.726e-31 Identity = 71/182 (39.01%), Postives = 94/182 (51.65%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFD-----------------------DLNDY--DQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 +FA G S VLHPKNP+ PT+H NYRYFE A WWFGGG DLTP Y + D +HFHS K+A D D + FK WCD+YF++KH F+D +L +Y + E L S A C + + +Y PII+KRK+ F+ + + +Q RRG Sbjct: 98 WFATGTSMVLHPKNPYIPTVHLNYRYFE---------AGPVWWFGGGADLTPFYPYLSDTRHFHSCHKNACDTIDKDLHKVFKPWCDEYFFLKHRNETRGVGGIFYDYQDGSGLLYKGQNANGKASKIAKELGEYSLNWENLFSLAKACGQAFLPSYEPIIKKRKNQSFSTKERDFQLYRRG 270
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_POLNA (Coproporphyrinogen-III oxidase, aerobic OS=Polaromonas naphthalenivorans (strain CJ2) GN=hemF PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 4.650e-31 Identity = 63/157 (40.13%), Postives = 86/157 (54.78%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V HP+NP+ PT+H N R + WFGGG DLTP Y F+ED HFH K + F YPRFK+WCD+YFY+KH FFDD + + +S ++AY+PI+E+RKD+ F ++ + +Q RRG Sbjct: 91 FEAMGVSLVFHPRNPYVPTVHMNVRMLAATPVGEN--CEPVCWFGGGMDLTPFYGFDEDAVHFHQVCKDSLKPFGDDKYPRFKQWCDEYFYLKHRQEQRGIGGVFFDDFQELGLAQSFAMMQSVGDSFLQAYLPIVERRKDSLFGERERDFQLYRRG 245
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_SHEPW (Coproporphyrinogen-III oxidase, aerobic OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=hemF PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 7.932e-31 Identity = 65/157 (41.40%), Postives = 88/157 (56.05%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP NP PT H N R+F A K+ G WWFGGG DLTP Y + EDV +H + K+ + F YP++KKWCD+YF++ H FFDDLN + F N + AY PI+E+RK+T + + + +Q RRG Sbjct: 88 FEAMGVSLVIHPNNPHIPTTHANVRFFI--AHKE--GTDPIWWFGGGFDLTPYYPYLEDVVSWHQSAKALCEPFGDETYPKYKKWCDEYFWLPHRNETRGVGGLFFDDLNKQGFDKSFDFMQAVGNGFLTAYAPIVERRKETEYGEHERQFQLYRRG 240
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_XANC5 (Coproporphyrinogen-III oxidase, aerobic OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=hemF PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.036e-30 Identity = 62/155 (40.00%), Postives = 89/155 (57.42%), Query Frame = 3 Query: 93 AAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 A G+S V HP NP+ PT H N RYF + + A WFGGG DLTP Y F+EDV+H+H ++ + F Y K+WCD+YF+++H FFDDL D E ++ + + AYIPI+++RKDTP+ ++ + +Q RRG Sbjct: 88 ACGVSLVFHPHNPYIPTTHMNVRYFRAERDGEVVAA----WFGGGFDLTPFYPFDEDVQHWHRVAQALCEPFGQERYAAHKRWCDEYFFLRHRNETRGVGGLFFDDLGQ-DFERDFAYQRAVGDGFLDAYIPIVQRRKDTPYGEREREFQLYRRG 237
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_PROMT (Coproporphyrinogen-III oxidase, aerobic OS=Prochlorococcus marinus (strain NATL2A) GN=hemF PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.036e-30 Identity = 70/182 (38.46%), Postives = 94/182 (51.65%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFD-----------------------DLNDY--DQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 +FA G S VLHPK+P+ PT+H NYRYFE A WWFGGG DLTP Y + D +HFHS K+A D D + FK WCD+YF++KH F+D +L +Y + E L S A C + + +Y PII+KRK+ F+ + + +Q RRG Sbjct: 98 WFATGTSMVLHPKSPYIPTVHLNYRYFE---------AGPVWWFGGGADLTPFYPYLSDTRHFHSCHKNACDTIDKDLHKVFKPWCDEYFFLKHRNETRGVGGIFYDYQDGSGLLYKGQNANGKASKIAKELGEYSLNWENLFSLAKACGQAFLPSYEPIIKKRKNQSFSTKERDFQLYRRG 270
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_PROM9 (Coproporphyrinogen-III oxidase, aerobic OS=Prochlorococcus marinus (strain MIT 9312) GN=hemF PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.353e-30 Identity = 68/182 (37.36%), Postives = 92/182 (50.55%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFD-------------------------DLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 +FA G S VLHPKNPF PT+H NYRYFE A WWFGGG DLTP Y + DV++FH K A +K D + FK WCD+YF++KH F+D ++ + + L S A C + + +Y+PIIEKR + +T + + +Q RRG Sbjct: 92 WFATGTSMVLHPKNPFIPTVHLNYRYFE---------AGPVWWFGGGADLTPFYPYLSDVRNFHKEHKKACEKVDKDLHKVFKPWCDEYFFLKHRNESRGIGGIFYDYQDGSGNIYRGNNQNGEASKVSENIGKSNLNWDNLFSLAENCGQAFLPSYLPIIEKRANKTYTSKEREFQLYRRG 264 The following BLAST results are available for this feature:
BLAST of CX306419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306419 ID=CX306419; Name=CX306419; organism=Citrus clementina; type=EST; length=558bpback to top |