CX306419
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_BURXL (Coproporphyrinogen-III oxidase, aerobic OS=Burkholderia xenovorans (strain LB400) GN=hemF PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 1.767e-30 Identity = 61/157 (38.85%), Postives = 87/157 (55.41%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S VLHP NP PT+H N R + P +WFGGG DLTP Y +EED +HFH T + A + YP FK+WCD+YF+++H FFDD + + + ++ ++AY+PIIEKR++ P+ + +Q RRG Sbjct: 93 FEAMGVSLVLHPHNPHCPTVHMNVRLLIATKAGEEP----VFWFGGGMDLTPFYGYEEDAQHFHRTCRDALQPYGADLYPSFKRWCDEYFFLRHRNEPRGIGGIFFDDFSAPGFDQSFAMLRSVGDAFLKAYLPIIEKRRNIPYGQAERDFQAYRRG 245
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_XYLFA (Coproporphyrinogen-III oxidase, aerobic OS=Xylella fastidiosa GN=hemF PE=3 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 2.308e-30 Identity = 65/155 (41.94%), Postives = 85/155 (54.84%), Query Frame = 3 Query: 93 AAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 A G+S V HPKNPF PT H N RYF + A WFGGG DLTP Y F+EDV H+H+ + F Y K+WCD+YF ++H FFDDL D D E ++ + + AY PI+ +R DTP+ D+ +A+Q RRG Sbjct: 88 ACGVSLVFHPKNPFVPTTHLNVRYFRAERDGKQVAA----WFGGGFDLTPFYPFDEDVVHWHTVARDLCAPFGDERYAAHKRWCDEYFVLRHRNETRGVGGLFFDDL-DKDFERDFAYQRAVGDGFLDAYFPIVTRRHDTPYGDRERAFQLYRRG 237
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_VIBPA (Coproporphyrinogen-III oxidase, aerobic OS=Vibrio parahaemolyticus GN=hemF PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 2.308e-30 Identity = 61/157 (38.85%), Postives = 85/157 (54.14%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HPKNP+ PT H N R+F + + P WWFGGG DLTP Y FEED + +H T K+ F Y K WCD YF++ H FFDDLN ++ + + +AY+PI+ +RKD + ++ + +Q RRG Sbjct: 92 FEAMGVSLVIHPKNPYVPTSHANVRFFIAEKEGEEP----IWWFGGGFDLTPFYPFEEDCQSWHDTAKAICAPFGEDVYAEHKAWCDKYFFLPHRNETRGVGGLFFDDLNHWEFDKCFDYIKAVGEGYCQAYLPIVSRRKDIEYGEREREFQLYRRG 244
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_XYLFT (Coproporphyrinogen-III oxidase, aerobic OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=hemF PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 3.014e-30 Identity = 65/155 (41.94%), Postives = 84/155 (54.19%), Query Frame = 3 Query: 93 AAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 A G+S V HPKNPF PT H N RYF + A WFGGG DLTP Y F+EDV H+H+ + F Y K+WCD+YF ++H FFDDL D D E + + + AY PI+ +R DTP+ D+ +A+Q RRG Sbjct: 88 ACGVSLVFHPKNPFVPTTHLNVRYFRAEREGKQVAA----WFGGGFDLTPFYPFDEDVVHWHTVARDLCAPFGDERYAAHKRWCDEYFVLRHRNETRGVGGLFFDDL-DKDFERDFDYQRAVGDGFLDAYFPIVTRRHDTPYGDRERAFQLYRRG 237
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_SYNSC (Coproporphyrinogen-III oxidase, aerobic OS=Synechococcus sp. (strain CC9605) GN=hemF PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 3.014e-30 Identity = 70/183 (38.25%), Postives = 89/183 (48.63%), Query Frame = 3 Query: 84 PFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFD--DLN-----------------------DYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 P+FA G S VLHP+NP+ PT+H NYRYFE A WWFGGG DLTP Y F +D +HFH T ++A D P + FK WCD+YFY+KH F+D D N E L S + + AY PI+EKR + D+ + +Q RRG Sbjct: 111 PWFATGTSMVLHPRNPYIPTVHLNYRYFE---------AGPVWWFGGGADLTPYYPFLDDARHFHRTHQAACDSVHPDLHKVFKPWCDEYFYLKHRGETRGVGGIFYDYQDANGTLYKGQDPSGPAAQVSASLGARPLSWEQLFSLGQANGRAFLPAYAPIVEKRHPMAYGDRERDFQLYRRG 284
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_RICBR (Coproporphyrinogen-III oxidase, aerobic OS=Rickettsia bellii (strain RML369-C) GN=hemF PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 3.014e-30 Identity = 65/157 (41.40%), Postives = 87/157 (55.41%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 FFA GIS V H K+P P +HFN RY ET WFGGG DLTP Y E++ FH+ K A DK+D +YP+FKK CD+YFY+KH F+D LN + E SF + +++ Y I+ + P+TD+ K +Q +RRG Sbjct: 96 FFATGISLVAHLKSPLIPAMHFNTRYIETSKN----------WFGGGGDLTPFYPEEDETAKFHAAFKEACDKYDSGYYPKFKKQCDEYFYLKHRKEPRGVGGIFYDYLNSGNFEQDFSFTQDVGKALLSVYPEIVRNKLFLPWTDEQKEYQLIRRG 242
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_RICB8 (Coproporphyrinogen-III oxidase, aerobic OS=Rickettsia bellii (strain OSU 85-389) GN=hemF PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 3.014e-30 Identity = 65/157 (41.40%), Postives = 87/157 (55.41%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 FFA GIS V H K+P P +HFN RY ET WFGGG DLTP Y E++ FH+ K A DK+D +YP+FKK CD+YFY+KH F+D LN + E SF + +++ Y I+ + P+TD+ K +Q +RRG Sbjct: 96 FFATGISLVAHLKSPLIPAMHFNTRYIETSKN----------WFGGGGDLTPFYPEEDETAKFHAAFKEACDKYDSGYYPKFKKQCDEYFYLKHRKEPRGVGGIFYDYLNSGNFEQDFSFTQDVGKALLSVYPEIVRNKLFLPWTDEQKEYQLIRRG 242
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_XANAC (Coproporphyrinogen-III oxidase, aerobic OS=Xanthomonas axonopodis pv. citri GN=hemF PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 3.937e-30 Identity = 62/155 (40.00%), Postives = 88/155 (56.77%), Query Frame = 3 Query: 93 AAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 A G+S V HP NP+ PT H N RYF + + A WFGGG DLTP Y F+EDV+H+H ++ F Y K+WCD+YF+++H FFDDL D E ++ + + AYIPI+++RKDTP+ ++ + +Q RRG Sbjct: 88 ACGVSLVFHPHNPYIPTTHMNVRYFRAERDGEVVAA----WFGGGFDLTPFYPFDEDVQHWHRVAQALCVPFGQERYAAHKRWCDEYFFLRHRNETRGVGGLFFDDLGQ-DFERDFAYQRAVGDGFLDAYIPIVQRRKDTPYGEREREFQLYRRG 237
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_VARPS (Coproporphyrinogen-III oxidase, aerobic OS=Variovorax paradoxus (strain S110) GN=hemF PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 3.937e-30 Identity = 63/158 (39.87%), Postives = 86/158 (54.43%), Query Frame = 3 Query: 84 PFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 PF A G+S V HP+NP+ P +H N R P WFGGG DLTP Y FE+D HFH+ + A F YPRFK WCD+YF++KH FFDD + + + N+ + AY+PIIE+R+ P+ ++ +A+Q RRG Sbjct: 90 PFEAMGVSLVFHPRNPYVPIVHMNVRMLAALPEGKDPVC----WFGGGMDLTPCYGFEDDAVHFHTVCRDALAPFGDDKYPRFKTWCDEYFFLKHRNEQRGIGGIFFDDFAEGGFDNGFALLRSVGNAFLPAYLPIIERRRAMPWGERERAFQLYRRG 243
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_AZOSE (Coproporphyrinogen-III oxidase, aerobic OS=Azoarcus sp. (strain EbN1) GN=hemF PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 3.937e-30 Identity = 67/165 (40.61%), Postives = 95/165 (57.58%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDT---PGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKF--DPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDL---NDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S VLHP+NP+ PT+H N R+F P+ P A WWFGGG DLTP Y +EEDV++FH ++A + +P Y R K+WCD YF++KH FFDDL D + A ++ + AY+PIIE+R+D + ++ + +Q RRG Sbjct: 87 FEAMGVSLVLHPRNPYCPTVHMNVRFFIASHPEAAVPPPAAAPVWWFGGGMDLTPYYPYEEDVRNFHRACRAAVLPWGGEPE-YRRLKEWCDRYFFLKHRNEPRGVGGLFFDDLGADGKTDFDAAFGLARSVGDAFLDAYLPIIERRRDVAYGERERDFQAYRRG 250 The following BLAST results are available for this feature:
BLAST of CX306419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306419 ID=CX306419; Name=CX306419; organism=Citrus clementina; type=EST; length=558bpback to top |