CX306419
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_XYLFM (Coproporphyrinogen-III oxidase, aerobic OS=Xylella fastidiosa (strain M12) GN=hemF PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 5.141e-30 Identity = 65/155 (41.94%), Postives = 83/155 (53.55%), Query Frame = 3 Query: 93 AAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 A G+S V HPKNPF PT H N RYF + A WFGGG DLTP Y F+EDV H+H + F Y K+WCD+YF ++H FFDDL D D E + + + AY PI+ +R DTP+ D+ +A+Q RRG Sbjct: 88 ACGVSLVFHPKNPFVPTTHLNVRYFRAEREGKQVAA----WFGGGFDLTPFYPFDEDVVHWHRVARDLCAPFGDERYAAHKRWCDEYFVLRHRNETRGVGGLFFDDL-DKDFERDFDYQRAVGDGFLDAYFPIVTRRHDTPYGDRERAFQLYRRG 237
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_RICFE (Coproporphyrinogen-III oxidase, aerobic OS=Rickettsia felis GN=hemF PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 8.770e-30 Identity = 69/183 (37.70%), Postives = 93/183 (50.82%), Query Frame = 3 Query: 9 VYGVMPPEXXXXXXXXXSDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 V+G PE D K FFA GIS V H K+P P +HFN RY ET WFGGG DLTP Y E + FH+ K A DK+D ++YP+FKK CD+YFY+KH F+D LN + E +F + +++ Y I+ + P+T + K +Q +RRG Sbjct: 75 VFGEFSPEFRSEIPGAELDGK-----FFATGISLVAHLKSPLIPAMHFNTRYIETSKS----------WFGGGGDLTPFYPKENETAKFHAAFKEACDKYDSSYYPKFKKQCDEYFYLKHRKEPRGVGGIFYDYLNSGNFEQDFAFTQDVGRALLSVYPEIVRSKLFLPWTTEQKEYQLIRRG 242
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_PROM2 (Coproporphyrinogen-III oxidase, aerobic OS=Prochlorococcus marinus (strain MIT 9215) GN=hemF PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 8.770e-30 Identity = 66/182 (36.26%), Postives = 92/182 (50.55%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFD-------------------------DLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 +FA G S VLHPKNP+ PT+H NYRYFE A WWFGGG DLTP Y + DV++FH+ K A +K D + FK WCD+YF++KH F+D ++ + + L S A C + + +Y+PIIEKR ++ + + +Q RRG Sbjct: 92 WFATGTSMVLHPKNPYIPTVHLNYRYFE---------AGPVWWFGGGADLTPFYPYLSDVRNFHNEHKKACEKVDNDLHKVFKPWCDEYFFLKHRNESRGIGGIFYDYQDGSGNIYRGNNQNGEASKASQSISKSNLNWDNLFSLAENCGQAFLPSYLPIIEKRASQTYSSREREFQLYRRG 264
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_SYNS9 (Coproporphyrinogen-III oxidase, aerobic OS=Synechococcus sp. (strain CC9902) GN=hemF PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.145e-29 Identity = 67/183 (36.61%), Postives = 87/183 (47.54%), Query Frame = 3 Query: 84 PFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFD-------------------------DLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 P+FA G S VLHP+NP+ PT+H NYRYFE A WWFGGG DLTP Y F +D +HFH T + A + P + FK WCD+YFY+KH F+D E L S + + +Y PI+EKR T + D+ + +Q RRG Sbjct: 111 PWFATGTSMVLHPRNPYIPTVHLNYRYFE---------AGPVWWFGGGADLTPYYPFLDDARHFHRTHQQACNSVHPNLHKVFKPWCDEYFYLKHRNETRGVGGIFYDYQDSRGTLYKGQDPTGAAAKVSSELGATPLSWEQLFSLGQANGRAFLPSYAPIVEKRHATSYGDRERDFQLYRRG 284
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_PROMS (Coproporphyrinogen-III oxidase, aerobic OS=Prochlorococcus marinus (strain AS9601) GN=hemF PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.145e-29 Identity = 66/182 (36.26%), Postives = 92/182 (50.55%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFD-------------------------DLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 +FA G S VLHPKNP+ PT+H NYRYFE A WWFGGG DLTP Y + DV++FH+ K A +K D + FK WCD+YF++KH F+D ++ + + L S A C + + +Y+PIIEKR ++ + + +Q RRG Sbjct: 92 WFATGTSMVLHPKNPYIPTVHLNYRYFE---------AGPVWWFGGGADLTPFYPYLSDVRNFHNEHKKACEKVDQDLHKVFKPWCDEYFFLKHRNESRGIGGIFYDYQDGSGNIYRGNNKNGEASKASQNVGRSNLNWDNLFSLAENCGQAFLPSYLPIIEKRASQKYSPKEREFQLYRRG 264
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_PROM0 (Coproporphyrinogen-III oxidase, aerobic OS=Prochlorococcus marinus (strain MIT 9301) GN=hemF PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.145e-29 Identity = 66/182 (36.26%), Postives = 92/182 (50.55%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFD-------------------------DLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 +FA G S VLHPKNP+ PT+H NYRYFE A WWFGGG DLTP Y + DV++FH+ K A +K D + FK WCD+YF++KH F+D ++ + + L S A C + + +Y+PIIEKR ++ + + +Q RRG Sbjct: 92 WFATGTSMVLHPKNPYIPTVHLNYRYFE---------AGPVWWFGGGADLTPFYPYLSDVRNFHNEHKKACEKVDQDLHKVFKPWCDEYFFLKHRNESRGIGGIFYDYQDGSGNIYRGNNQKGEASKASQNIGRSNLNWDDLFSLAENCGQAFLPSYLPIIEKRASQAYSSKEREFQLYRRG 264
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_XANCP (Coproporphyrinogen-III oxidase, aerobic OS=Xanthomonas campestris pv. campestris GN=hemF PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.954e-29 Identity = 63/155 (40.65%), Postives = 86/155 (55.48%), Query Frame = 3 Query: 93 AAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 A G+S V HP NP PT H N RYF + + A WFGGG DLTP Y +EDV H+H T ++ F Y K+WCD+YF+++H FFDDL D E ++ + + AY+PI+E+RKDTP+ + +A+Q RRG Sbjct: 88 ACGVSLVFHPHNPHIPTTHANVRYFRAERDGEMVAA----WFGGGFDLTPFYPVDEDVMHWHRTAQALCAPFGEERYAAHKRWCDEYFFLRHRNETRGVGGLFFDDLGQ-DFERDFAYQRAVGDGFLDAYLPIVERRKDTPYGEAERAFQLYRRG 237
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_XANCB (Coproporphyrinogen-III oxidase, aerobic OS=Xanthomonas campestris pv. campestris (strain B100) GN=hemF PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.954e-29 Identity = 63/155 (40.65%), Postives = 86/155 (55.48%), Query Frame = 3 Query: 93 AAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 A G+S V HP NP PT H N RYF + + A WFGGG DLTP Y +EDV H+H T ++ F Y K+WCD+YF+++H FFDDL D E ++ + + AY+PI+E+RKDTP+ + +A+Q RRG Sbjct: 88 ACGVSLVFHPHNPHIPTTHANVRYFRAERDGEMVAA----WFGGGFDLTPFYPVDEDVMHWHRTAQALCAPFGEERYAAHKRWCDEYFFLRHRDETRGVGGLFFDDLGQ-DFERDFAYQRAVGDGFLDAYLPIVERRKDTPYGEAERAFQLYRRG 237
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_XANC8 (Coproporphyrinogen-III oxidase, aerobic OS=Xanthomonas campestris pv. campestris (strain 8004) GN=hemF PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.954e-29 Identity = 63/155 (40.65%), Postives = 86/155 (55.48%), Query Frame = 3 Query: 93 AAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 A G+S V HP NP PT H N RYF + + A WFGGG DLTP Y +EDV H+H T ++ F Y K+WCD+YF+++H FFDDL D E ++ + + AY+PI+E+RKDTP+ + +A+Q RRG Sbjct: 88 ACGVSLVFHPHNPHIPTTHANVRYFRAERDGEMVAA----WFGGGFDLTPFYPVDEDVMHWHRTAQALCAPFGEERYAAHKRWCDEYFFLRHRNETRGVGGLFFDDLGQ-DFERDFAYQRAVGDGFLDAYLPIVERRKDTPYGEAERAFQLYRRG 237
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_PROM5 (Coproporphyrinogen-III oxidase, aerobic OS=Prochlorococcus marinus (strain MIT 9515) GN=hemF PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.954e-29 Identity = 69/182 (37.91%), Postives = 90/182 (49.45%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFD--------------DLNDYDQ-----------EMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 +FA G S VLHPKNPF PT+H NYRYFE A WWFGGG DLTP Y + DV+HFH +A +K + + FK WCD+YF++KH F+D D N Y + L + A C + + +Y PIIEKR +T + + +Q RRG Sbjct: 92 WFATGTSMVLHPKNPFIPTVHLNYRYFE---------AGPVWWFGGGADLTPYYPYLSDVRHFHKEHSNACEKVNKKLHLVFKPWCDEYFFLKHRNESRGIGGIFYDYQDGSGNIYKGSNKDGNAYKESNNIGELNLNWNNLFALAENCGEAFLSSYQPIIEKRVSQNYTKEEREFQLYRRG 264 The following BLAST results are available for this feature:
BLAST of CX306419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306419 ID=CX306419; Name=CX306419; organism=Citrus clementina; type=EST; length=558bpback to top |