CX306419
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_XANOR (Coproporphyrinogen-III oxidase, aerobic OS=Xanthomonas oryzae pv. oryzae GN=hemF PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 2.552e-29 Identity = 60/155 (38.71%), Postives = 88/155 (56.77%), Query Frame = 3 Query: 93 AAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 A G+S V HP NP+ PT H N RYF + + A WFGGG DLTP Y F+EDV+H+H ++ + F Y K+WCD+YF+++H FFDDL + E ++ N + AY+PI+++RKDT + ++ + +Q RRG Sbjct: 88 ACGVSLVFHPHNPYIPTTHMNVRYFRAERDGEVVAA----WFGGGFDLTPFYPFDEDVQHWHRVAQALCEPFGEERYAAHKRWCDEYFFLRHRNETRGVGGLFFDDLGK-EFEHDFAYQQAVGNGFLDAYMPIVQRRKDTAYGEREREFQLYRRG 237
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_XANOP (Coproporphyrinogen-III oxidase, aerobic OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=hemF PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 2.552e-29 Identity = 60/155 (38.71%), Postives = 88/155 (56.77%), Query Frame = 3 Query: 93 AAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 A G+S V HP NP+ PT H N RYF + + A WFGGG DLTP Y F+EDV+H+H ++ + F Y K+WCD+YF+++H FFDDL + E ++ N + AY+PI+++RKDT + ++ + +Q RRG Sbjct: 88 ACGVSLVFHPHNPYIPTTHMNVRYFRAERDGEVVAA----WFGGGFDLTPFYPFDEDVQHWHRVAQALCEPFGEERYAAHKRWCDEYFFLRHRNETRGVGGLFFDDLGK-EFEHDFAYQQAVGNGFLDAYMPIVQRRKDTAYGEREREFQLYRRG 237
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_XANOM (Coproporphyrinogen-III oxidase, aerobic OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=hemF PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 2.552e-29 Identity = 60/155 (38.71%), Postives = 88/155 (56.77%), Query Frame = 3 Query: 93 AAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 A G+S V HP NP+ PT H N RYF + + A WFGGG DLTP Y F+EDV+H+H ++ + F Y K+WCD+YF+++H FFDDL + E ++ N + AY+PI+++RKDT + ++ + +Q RRG Sbjct: 88 ACGVSLVFHPHNPYIPTTHMNVRYFRAERDGEVVAA----WFGGGFDLTPFYPFDEDVQHWHRVAQALCEPFGEERYAAHKRWCDEYFFLRHRNETRGVGGLFFDDLGK-EFEHDFAYQQAVGNGFLDAYMPIVQRRKDTAYGEREREFQLYRRG 237
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_RICTY (Coproporphyrinogen-III oxidase, aerobic OS=Rickettsia typhi GN=hemF PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 2.552e-29 Identity = 61/157 (38.85%), Postives = 88/157 (56.05%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 FFA GIS V H K+P P +HFN RY ET WFGGG+DLTP Y E + FH+ K A DK+D ++YP+FK+ CD+YFY++H F+D LN + E +F + +++ Y I+ + P+TD+ K +Q ++RG Sbjct: 96 FFATGISVVAHLKSPLIPAMHFNTRYIETSKN----------WFGGGSDLTPFYPEENETAKFHTAFKEACDKYDSSYYPKFKRQCDEYFYLRHRKEPRGVGGIFYDYLNSGNFEQDFAFTRDIGKALLSVYPEIVRSKLFLPWTDEQKEYQLIKRG 242
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_RICPU (Coproporphyrinogen-III oxidase, aerobic OS=Rickettsia peacockii (strain Rustic) GN=hemF PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 2.552e-29 Identity = 68/183 (37.16%), Postives = 95/183 (51.91%), Query Frame = 3 Query: 9 VYGVMPPEXXXXXXXXXSDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 V+G + PE D K FFA GIS V H K+P P +HFN RY ET WFGGG DLTP Y + + FH+ K A DK+D ++YP+FKK CD+YFY+KH F+D LN+ + E +F + +++ Y I+ + P+T + K +Q +RRG Sbjct: 75 VFGKISPEFRNEIPGVELDGK-----FFATGISLVAHLKSPLIPAMHFNTRYIETSKS----------WFGGGGDLTPFYPEKNETVKFHAAFKEACDKYDSSYYPKFKKQCDEYFYLKHRKEPRGVGGIFYDYLNNGNFEQDFAFTQDVGKALLSVYPEIVRSKLFLPWTAEQKEYQLIRRG 242
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_RICCN (Coproporphyrinogen-III oxidase, aerobic OS=Rickettsia conorii GN=hemF PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 2.552e-29 Identity = 68/183 (37.16%), Postives = 95/183 (51.91%), Query Frame = 3 Query: 9 VYGVMPPEXXXXXXXXXSDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 V+G + PE D K FFA GIS V H K+P P +HFN RY ET WFGGG DLTP Y + + FH+ K A DK+D ++YP+FKK CD+YFY+KH F+D LN+ + E +F + +++ Y I+ + P+T + K +Q +RRG Sbjct: 75 VFGKISPEFRNEIPGAELDGK-----FFATGISLVAHLKSPLIPAMHFNTRYIETSKS----------WFGGGGDLTPFYPEKNETVKFHAAFKEACDKYDSSYYPKFKKQCDEYFYLKHRKEPRGVGGIFYDYLNNGNFEQDFAFTQDVGKALLSVYPEIVRSKLFLPWTAEQKEYQLIRRG 242
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_SYNPX (Coproporphyrinogen-III oxidase, aerobic OS=Synechococcus sp. (strain WH8102) GN=hemF PE=3 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 7.424e-29 Identity = 66/183 (36.07%), Postives = 86/183 (46.99%), Query Frame = 3 Query: 84 PFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFD-------------------------DLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 P+FA G S VLHP NP+ PT+H NYRYFE A WWFGGG DLTP Y F ED +HFH T ++A D P + FK WCD+YF++KH F+D E L + + + +Y PI+EKR + D+ + +Q RRG Sbjct: 112 PWFATGTSMVLHPHNPYIPTVHLNYRYFE---------AGPVWWFGGGADLTPYYPFLEDARHFHRTHQAACDSVHPDLHKVFKPWCDEYFFLKHRGETRGVGGIFYDYQDSSGVLYKGQDPSGPAAGVSAQLGARPLGWEQLFALGQANGRAFLPSYAPIVEKRHPMAYGDRERQFQLYRRG 285
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_RICRS (Coproporphyrinogen-III oxidase, aerobic OS=Rickettsia rickettsii (strain Sheila Smith) GN=hemF PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 7.424e-29 Identity = 67/183 (36.61%), Postives = 94/183 (51.37%), Query Frame = 3 Query: 9 VYGVMPPEXXXXXXXXXSDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 V+G + PE D K FFA GIS V H K+P P +HFN RY ET WFGGG DLTP Y + + FH+ K DK+D ++YP+FKK CD+YFY+KH F+D LN+ + E +F + +++ Y I+ + P+T + K +Q +RRG Sbjct: 75 VFGKISPEFRNEIPGAELDGK-----FFATGISLVAHLKSPLIPAMHFNTRYIETSKS----------WFGGGGDLTPFYPEKNETVKFHAAFKEVCDKYDSSYYPKFKKQCDEYFYLKHRKEPRGVGGIFYDYLNNGNFEQDFAFTQDVGKTLLSVYPEIVRSKLFLPWTAEQKEYQLIRRG 242
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_RICRO (Coproporphyrinogen-III oxidase, aerobic OS=Rickettsia rickettsii (strain Iowa) GN=hemF PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 7.424e-29 Identity = 67/183 (36.61%), Postives = 94/183 (51.37%), Query Frame = 3 Query: 9 VYGVMPPEXXXXXXXXXSDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 V+G + PE D K FFA GIS V H K+P P +HFN RY ET WFGGG DLTP Y + + FH+ K DK+D ++YP+FKK CD+YFY+KH F+D LN+ + E +F + +++ Y I+ + P+T + K +Q +RRG Sbjct: 75 VFGKISPEFRNEIPGAELDGK-----FFATGISLVAHLKSPLIPAMHFNTRYIETSKS----------WFGGGGDLTPFYPEKNETVKFHAAFKEVCDKYDSSYYPKFKKQCDEYFYLKHRKEPRGVGGIFYDYLNNGNFEQDFAFTQDVGKTLLSVYPEIVRSKLFLPWTAEQKEYQLIRRG 242
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_RICPR (Coproporphyrinogen-III oxidase, aerobic OS=Rickettsia prowazekii GN=hemF PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 9.696e-29 Identity = 62/157 (39.49%), Postives = 86/157 (54.78%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 FFA GIS V H K+P P +HFN RY ET WFGGG DLTP Y E + FH+ K A DK+D ++YP+FKK CD+YFY++H F+D LN + E +F + +++ Y I+ + P+T + K +Q +RRG Sbjct: 96 FFATGISVVAHLKSPLIPAMHFNTRYIETSKN----------WFGGGGDLTPFYPEENETAKFHTAFKEACDKYDSSYYPKFKKQCDEYFYLRHRKEPRGVGGIFYDYLNSGNFEQDFAFTKDIGKALLSVYPEIVRSKLFLPWTAEQKEYQLIRRG 242 The following BLAST results are available for this feature:
BLAST of CX306419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306419 ID=CX306419; Name=CX306419; organism=Citrus clementina; type=EST; length=558bpback to top |