CX306419
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_BURM7 (Coproporphyrinogen-III oxidase, aerobic OS=Burkholderia mallei (strain NCTC 10247) GN=hemF PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 1.949e-37 Identity = 69/157 (43.95%), Postives = 96/157 (61.15%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S VLHP+NP+ PT+H N R P + P +WFGGG DLTP Y FEED +HFH T ++A + F YPRFKKWCDDYF++KH FFDD ++ E ++ + +Y+PI+E+R+DTP+ ++ +A+Q RRG Sbjct: 93 FEALGVSLVLHPRNPYCPTVHMNVRMLIATKPGEAP----VFWFGGGMDLTPIYGFEEDARHFHRTCRAALEPFGAELYPRFKKWCDDYFFLKHRNEARGIGGIFFDDFSELGFERSFEMLQSVGDAFLPSYLPIVERRRDTPYGERERAFQAYRRG 245
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_PROMH (Coproporphyrinogen-III oxidase, aerobic OS=Proteus mirabilis (strain HI4320) GN=hemF PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 5.671e-37 Identity = 72/157 (45.86%), Postives = 91/157 (57.96%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP NP+ PT H N R+F + + P WWFGGG DLTP Y FEEDV H+H KS D F +Y R+KKWCDDYFY+KH FFDDLN D + F + AY+PI+EKRK P+ ++ + +Q RRG Sbjct: 88 FQAMGVSLVIHPLNPYIPTSHANVRFFIAEKEGEDP----VWWFGGGFDLTPYYGFEEDVIHWHKVAKSVCDPFSQDYYARYKKWCDDYFYLKHRNEPRGVGGLFFDDLNTPDFDHCFEFVQHVGQGYLDAYLPIVEKRKSIPWGERERQFQLYRRG 240
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_ENTS8 (Coproporphyrinogen-III oxidase, aerobic OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=hemF PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 5.671e-37 Identity = 71/157 (45.22%), Postives = 93/157 (59.24%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP+NP+ PT H N R+F + P GA WWFGGG DLTP Y FEED H+H T + F YPR+KKWCDDYFY+KH FFDDLN D + +F + + AY+PI+E+RK P+ ++ + +Q RRG Sbjct: 86 FEAMGVSLVVHPRNPYVPTSHANVRFFIAEKP----GADPVWWFGGGFDLTPFYGFEEDAVHWHRTARDLCAPFGDDVYPRYKKWCDDYFYLKHRQEARGIGGLFFDDLNTPDFDTCFAFMQAVGDGYLNAYLPIVERRKTLPWGEREREFQLYRRG 238
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_NITEC (Coproporphyrinogen-III oxidase, aerobic OS=Nitrosomonas eutropha (strain C91) GN=hemF PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 7.407e-37 Identity = 74/157 (47.13%), Postives = 95/157 (60.51%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F AAG+S VLHP+NP+APT+H N R+F A K+ GA WWFGGG DLTP Y FEED HFH K A +YPRFKKWCD+YFY+KH FFDDLN D + + + AY+PI++KR + P+ ++ + +Q RRG Sbjct: 84 FEAAGVSLVLHPRNPYAPTVHMNVRFFA--AIKE--GAEPVWWFGGGMDLTPYYGFEEDAIHFHQICKHALQPSGSEYYPRFKKWCDEYFYLKHRKEPRGIGGVFFDDLNQPDFVTCFNLTKSVGDQFLAAYVPILQKRCNLPYGERERDFQAYRRG 236
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_KLEP7 (Coproporphyrinogen-III oxidase, aerobic OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=hemF PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 7.407e-37 Identity = 73/157 (46.50%), Postives = 92/157 (58.60%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP NP+ PT H N R+F + P GA WWFGGG DLTP Y FEED H+H T + F YPR+KKWCDDYFY+KH FFDDLN D + +F N AY+PI+E+RK TP+ ++ + +Q RRG Sbjct: 86 FEAMGVSLVVHPLNPYVPTSHANVRFFIAEKP----GADPVWWFGGGFDLTPYYGFEEDAVHWHRTARDLCLPFGEEVYPRYKKWCDDYFYLKHRQEQRGIGGLFFDDLNTPDFDHCFAFMQAVGNGYADAYLPIVERRKATPYGERERHFQLYRRG 238
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_COXBU (Coproporphyrinogen-III oxidase, aerobic OS=Coxiella burnetii GN=hemF PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 7.407e-37 Identity = 69/157 (43.95%), Postives = 97/157 (61.78%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP+NP+ PT+H N+R+F + P +WWFGGG DLTP Y FEED +H+H K A D+F YPRFK CDDYFY+KH FFDDLN+++ + F +S + AY+PI++ RK+ P+ ++ + +Q RRG Sbjct: 91 FQAEGLSLVIHPRNPYVPTVHANFRFFIAGKDEADP----RWWFGGGYDLTPYYGFEEDCRHWHRVAKKACDRFGEAIYPRFKAACDDYFYLKHRNEPRGIGGLFFDDLNEWEFKRCFEFIKILGDSFLEAYLPIMQNRKNHPYGERQREFQLYRRG 243
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_COXBR (Coproporphyrinogen-III oxidase, aerobic OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=hemF PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 7.407e-37 Identity = 69/157 (43.95%), Postives = 97/157 (61.78%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP+NP+ PT+H N+R+F + P +WWFGGG DLTP Y FEED +H+H K A D+F YPRFK CDDYFY+KH FFDDLN+++ + F +S + AY+PI++ RK+ P+ ++ + +Q RRG Sbjct: 91 FQAEGLSLVIHPRNPYVPTVHANFRFFIAGKDEADP----RWWFGGGYDLTPYYGFEEDCRHWHRVAKKACDRFGEAIYPRFKAACDDYFYLKHRNEPRGIGGLFFDDLNEWEFKRCFEFIKILGDSFLEAYLPIMQNRKNHPYGERQREFQLYRRG 243
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_COXBN (Coproporphyrinogen-III oxidase, aerobic OS=Coxiella burnetii (strain Dugway 5J108-111) GN=hemF PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 7.407e-37 Identity = 69/157 (43.95%), Postives = 97/157 (61.78%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP+NP+ PT+H N+R+F + P +WWFGGG DLTP Y FEED +H+H K A D+F YPRFK CDDYFY+KH FFDDLN+++ + F +S + AY+PI++ RK+ P+ ++ + +Q RRG Sbjct: 91 FQAEGLSLVIHPRNPYVPTVHANFRFFIAGKDEADP----RWWFGGGYDLTPYYGFEEDCRHWHRVAKKACDRFGEAIYPRFKAACDDYFYLKHRNEPRGIGGLFFDDLNEWEFKRCFEFIKILGDSFLEAYLPIMQNRKNHPYGERQREFQLYRRG 243
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_ALCBS (Coproporphyrinogen-III oxidase, aerobic OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=hemF PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.263e-36 Identity = 72/157 (45.86%), Postives = 91/157 (57.96%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HPKNP+ PT H N R+F + + P WWFGGG DLTP Y FEEDV H+H T K A F YP FK WCDDYFY+KH FFDDLN +D + + ++ + AY PI+ +RKD F D+ + +Q RRG Sbjct: 88 FQAMGVSLVIHPKNPYVPTSHANVRFFVAEKEGEAP----VWWFGGGFDLTPYYGFEEDVVHWHQTAKVACQPFGKEIYPEFKTWCDDYFYLKHRNEPRGVGGLFFDDLNRFDFDTSFALMRSIGDAYVPAYQPILARRKDHEFGDRERQFQLYRRG 240
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_METCA (Coproporphyrinogen-III oxidase, aerobic OS=Methylococcus capsulatus GN=hemF PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 4.801e-36 Identity = 68/157 (43.31%), Postives = 96/157 (61.15%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP NP+ PT H N R+F + +TP WWFGGG DLTP Y FEEDV H+H T ++A F YPRFK+WCD+YF++ H FFDDLN++ E +F + ++AY+PI+++RK P+ ++ + +Q RRG Sbjct: 88 FQATGVSLVIHPLNPYVPTSHANVRFFLAEKEGETP----IWWFGGGFDLTPFYPFEEDVIHWHRTARNACLPFGEDVYPRFKRWCDEYFFLNHRNETRGVGGLFFDDLNEWGFERSFAFLRSVGDHYLKAYLPIVQRRKAIPYGEREREFQLYRRG 240 The following BLAST results are available for this feature:
BLAST of CX306419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306419 ID=CX306419; Name=CX306419; organism=Citrus clementina; type=EST; length=558bpback to top |