CX306419
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_KLEP3 (Coproporphyrinogen-III oxidase, aerobic OS=Klebsiella pneumoniae (strain 342) GN=hemF PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 4.801e-36 Identity = 72/157 (45.86%), Postives = 91/157 (57.96%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP NP+ PT H N R+F + P GA WWFGGG DLTP Y FEED H+H T + F YPR+KKWCDDYFY+KH FFDDLN D + +F N AY+PI+E+RK P+ ++ + +Q RRG Sbjct: 86 FEAMGVSLVVHPLNPYVPTSHANVRFFIAEKP----GADPVWWFGGGFDLTPYYGFEEDAIHWHRTARDLCLPFGEEVYPRYKKWCDDYFYLKHRQEQRGIGGLFFDDLNTPDFDHCFAFMQAVGNGYADAYLPIVERRKAMPYGERERHFQLYRRG 238
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_SHESR (Coproporphyrinogen-III oxidase, aerobic OS=Shewanella sp. (strain MR-7) GN=hemF PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 6.270e-36 Identity = 72/157 (45.86%), Postives = 94/157 (59.87%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HPKNP+ PT H N R+F A KD GA WWFGGG DLTP Y FEEDV+ +H T K+ F YP++KKWCD+YF++ H FFDDLN + F N + AY PI+E+RK+TP+ ++ + +Q RRG Sbjct: 88 FEAMGVSLVIHPKNPYIPTTHANVRFFI--AHKD--GADPVWWFGGGFDLTPYYPFEEDVREWHQTAKNLCLPFGDDIYPKYKKWCDEYFFLPHRNETRGVGGLFFDDLNQAGFDKSFDFMQAVGNGFLTAYAPIVERRKETPYGEREREFQLYRRG 240
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_SHESM (Coproporphyrinogen-III oxidase, aerobic OS=Shewanella sp. (strain MR-4) GN=hemF PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 6.270e-36 Identity = 72/157 (45.86%), Postives = 94/157 (59.87%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HPKNP+ PT H N R+F A KD GA WWFGGG DLTP Y FEEDV+ +H T K+ F YP++KKWCD+YF++ H FFDDLN + F N + AY PI+E+RK+TP+ ++ + +Q RRG Sbjct: 88 FEAMGVSLVIHPKNPYIPTTHANVRFFI--AHKD--GADPVWWFGGGFDLTPYYPFEEDVREWHQTAKNLCLPFGDDIYPKYKKWCDEYFFLPHRNETRGVGGLFFDDLNQAGFDKSFDFMQAVGNGFLTAYAPIVERRKETPYGEREREFQLYRRG 240
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_SHEB8 (Coproporphyrinogen-III oxidase, aerobic OS=Shewanella baltica (strain OS185) GN=hemF PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 6.270e-36 Identity = 73/157 (46.50%), Postives = 92/157 (58.60%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP NP+ PT H N R+F A K+ GA WWFGGG DLTP Y FEEDV+ +H T K F YP++KKWCD+YF++ H FFDDLN E SF N + AY PI+E+RKDT F ++ + +Q RRG Sbjct: 88 FEAMGVSLVIHPNNPYIPTTHANVRFFI--AQKE--GADPVWWFGGGFDLTPYYPFEEDVREWHQTSKDICAPFGDEVYPKYKKWCDEYFFLPHRNETRGVGGLFFDDLNQAGFEQSFSFMQAVGNGFLTAYAPIVERRKDTEFGERERQFQLYRRG 240
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_SHEB5 (Coproporphyrinogen-III oxidase, aerobic OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=hemF PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 6.270e-36 Identity = 73/157 (46.50%), Postives = 92/157 (58.60%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP NP+ PT H N R+F A K+ GA WWFGGG DLTP Y FEEDV+ +H T K F YP++KKWCD+YF++ H FFDDLN E SF N + AY PI+E+RKDT F ++ + +Q RRG Sbjct: 88 FEAMGVSLVIHPNNPYIPTTHANVRFFI--AQKE--GADPVWWFGGGFDLTPYYPFEEDVREWHQTSKDICAPFGDEVYPKYKKWCDEYFFLPHRNETRGVGGLFFDDLNQAGFEQSFSFMQAVGNGFLTAYAPIVERRKDTEFGERERQFQLYRRG 240
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_THISH (Coproporphyrinogen-III oxidase, aerobic OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=hemF PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 8.189e-36 Identity = 67/157 (42.68%), Postives = 96/157 (61.15%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP+NP+ PT H N R+F + GA WWFGGG DLTP Y +ED H+H K+A + F P YPR+K+WCD+YF+++H FFDDLN++ E +F + + AY+PI+ +RKDTP+ ++ + +Q RRG Sbjct: 89 FQATGVSLVIHPRNPYVPTSHANVRFFIAEKE----GAEPIWWFGGGFDLTPYYGEDEDCVHWHRVAKAACEPFGPEVYPRYKQWCDEYFFLRHRNEPRGVGGLFFDDLNEWGFEKSFAFMRSVGDHYLDAYLPIVARRKDTPYGERERDFQLYRRG 241
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_SYNY3 (Coproporphyrinogen-III oxidase, aerobic OS=Synechocystis sp. (strain PCC 6803) GN=hemF PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 8.189e-36 Identity = 77/183 (42.08%), Postives = 95/183 (51.91%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFD--------------------------DLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F+A G S VLHPKNP+ PT+H NYRYFE A WWFGGG DLTP Y F ED HFH T K+A D+ FYP FK+WCD+YFY+KH FFD + E L SFA C + + AY PI+EKR++T + D+ + +Q RRG Sbjct: 103 FYATGTSMVLHPKNPYIPTVHLNYRYFE---------AGPVWWFGGGADLTPYYPFAEDAAHFHHTLKNACDQTHGEFYPVFKRWCDEYFYLKHRQEMRGIGGIFFDYQDGNAPLYRGPDPNGPAAQYSNQLAPIEPLGWEDLFSFAQRCGRAFLPAYSPIVEKRRNTEYGDRQRQFQLYRRG 276
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_SACD2 (Coproporphyrinogen-III oxidase, aerobic OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=hemF PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 8.189e-36 Identity = 70/157 (44.59%), Postives = 93/157 (59.24%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP NP PT H N R+F + GA WWFGGG DLTP Y +ED +H+H+T K+A F YPR+KKWCD+YFY+KH FFDDLN+ + +F +S +AY+PI+E+RKD P+ + +Q RRG Sbjct: 88 FEAMGVSLVIHPNNPHVPTSHANVRFFIAEKE----GAEPVWWFGGGYDLTPYYGNDEDCRHWHNTAKAACAPFGEDKYPRYKKWCDEYFYLKHRDEPRGVGGLFFDDLNELGFDQSFAFMQAVGDSYTQAYVPIVERRKDEPYNQAQRDFQLYRRG 240
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_SHESA (Coproporphyrinogen-III oxidase, aerobic OS=Shewanella sp. (strain ANA-3) GN=hemF PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.070e-35 Identity = 72/157 (45.86%), Postives = 94/157 (59.87%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HPKNP+ PT H N R+F A KD GA WWFGGG DLTP Y FEEDV+ +H T K+ F YP++KKWCD+YF++ H FFDDLN + F N + AY PI+E+RK+TP+ ++ + +Q RRG Sbjct: 88 FEAMGVSLVIHPKNPYIPTTHANVRFFI--AHKD--GADPVWWFGGGFDLTPYYPFEEDVREWHQTAKNLCLPFGDDVYPKYKKWCDEYFFLPHRNETRGVGGLFFDDLNQAGFDKSFDFMQAVGNGFLTAYAPIVERRKETPYGERERDFQLYRRG 240
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_RALSO (Coproporphyrinogen-III oxidase, aerobic OS=Ralstonia solanacearum GN=hemF PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.070e-35 Identity = 70/157 (44.59%), Postives = 90/157 (57.32%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V HP+NP+APT+H N R F P P WWFGGG DLTP Y F ED HFH T K A + F YPRFK+WCDDYFY+KH FFDD + E ++++ A++PI E+R TP+ ++ +A+Q RRG Sbjct: 88 FEAMGVSLVFHPRNPYAPTVHMNVRCFVAQRPDAEP----VWWFGGGMDLTPYYGFAEDAAHFHRTCKQALEPFGEELYPRFKQWCDDYFYLKHRKEARGVGGIFFDDFAELGFERSFEMMRAVGDALLPAWLPIAEQRHATPYGERERAFQAYRRG 240 The following BLAST results are available for this feature:
BLAST of CX306419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306419 ID=CX306419; Name=CX306419; organism=Citrus clementina; type=EST; length=558bpback to top |