CX306419
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_SHEB2 (Coproporphyrinogen-III oxidase, aerobic OS=Shewanella baltica (strain OS223) GN=hemF PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.397e-35 Identity = 72/157 (45.86%), Postives = 92/157 (58.60%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP NP+ PT H N R+F A K+ GA WWFGGG DLTP Y FEEDV+ +H T K F YP++KKWCD+YF++ H FFDDLN + SF N + AY PI+E+RKDT F ++ + +Q RRG Sbjct: 88 FEAMGVSLVIHPNNPYIPTTHANVRFFI--AQKE--GADPVWWFGGGFDLTPYYPFEEDVREWHQTSKDICAPFGDEVYPKYKKWCDEYFFLPHRNETRGVGGLFFDDLNQEGFDQSFSFMQAVGNGFLTAYAPIVERRKDTEFGERERQFQLYRRG 240
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_SALTY (Coproporphyrinogen-III oxidase, aerobic OS=Salmonella typhimurium GN=hemF PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.397e-35 Identity = 71/157 (45.22%), Postives = 90/157 (57.32%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP NP+ PT H N R+F + P GA WWFGGG DLTP Y FEED H+H T + F YPR+KKWCDDYF++KH FFDDLN D + F N RAY+PI+E+RK + ++ + +Q RRG Sbjct: 86 FEAMGVSLVVHPHNPYIPTSHANVRFFIAEKP----GADPVWWFGGGFDLTPYYGFEEDAVHWHRTARDLCQPFGDDVYPRYKKWCDDYFFLKHRNEQRGVGGLFFDDLNTPDFDHCFDFMQAVGNGYTRAYLPIVERRKAMVWGERERNFQLYRRG 238
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_SALPC (Coproporphyrinogen-III oxidase, aerobic OS=Salmonella paratyphi C (strain RKS4594) GN=hemF PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.397e-35 Identity = 71/157 (45.22%), Postives = 90/157 (57.32%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP NP+ PT H N R+F + P GA WWFGGG DLTP Y FEED H+H T + F YPR+KKWCDDYF++KH FFDDLN D + F N RAY+PI+E+RK + ++ + +Q RRG Sbjct: 86 FEAMGVSLVVHPHNPYIPTSHANVRFFIAEKP----GADPVWWFGGGFDLTPYYGFEEDAVHWHRTARDLCQPFGDDVYPRYKKWCDDYFFLKHRNEQRGIGGLFFDDLNTPDFDHCFDFMQAVGNGYTRAYLPIVERRKAMVWGERERNFQLYRRG 238
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_SALPB (Coproporphyrinogen-III oxidase, aerobic OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=hemF PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.397e-35 Identity = 71/157 (45.22%), Postives = 90/157 (57.32%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP NP+ PT H N R+F + P GA WWFGGG DLTP Y FEED H+H T + F YPR+KKWCDDYF++KH FFDDLN D + F N RAY+PI+E+RK + ++ + +Q RRG Sbjct: 86 FEAMGVSLVVHPHNPYIPTSHANVRFFIAEKP----GADPVWWFGGGFDLTPYYGFEEDAVHWHRTARDLCQPFGDDVYPRYKKWCDDYFFLKHRNEQRGIGGLFFDDLNTPDFDHCFDFMQAVGNGYTRAYLPIVERRKAMVWGERERNFQLYRRG 238
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_SALHS (Coproporphyrinogen-III oxidase, aerobic OS=Salmonella heidelberg (strain SL476) GN=hemF PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.397e-35 Identity = 71/157 (45.22%), Postives = 90/157 (57.32%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP NP+ PT H N R+F + P GA WWFGGG DLTP Y FEED H+H T + F YPR+KKWCDDYF++KH FFDDLN D + F N RAY+PI+E+RK + ++ + +Q RRG Sbjct: 86 FEAMGVSLVVHPHNPYIPTSHANVRFFIAEKP----GADPVWWFGGGFDLTPYYGFEEDAVHWHRTARDLCQPFGDDVYPRYKKWCDDYFFLKHRNEQRGVGGLFFDDLNTPDFDHCFDFMQAVGNGYTRAYLPIVERRKAMVWGERERNFQLYRRG 238
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_SALCH (Coproporphyrinogen-III oxidase, aerobic OS=Salmonella choleraesuis GN=hemF PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.397e-35 Identity = 71/157 (45.22%), Postives = 90/157 (57.32%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP NP+ PT H N R+F + P GA WWFGGG DLTP Y FEED H+H T + F YPR+KKWCDDYF++KH FFDDLN D + F N RAY+PI+E+RK + ++ + +Q RRG Sbjct: 86 FEAMGVSLVVHPHNPYIPTSHANVRFFIAEKP----GADPVWWFGGGFDLTPYYGFEEDAVHWHRTARDLCQPFGDDVYPRYKKWCDDYFFLKHRNEQRGIGGLFFDDLNTPDFDHCFDFMQAVGNGYTRAYLPIVERRKAMVWGERERNFQLYRRG 238
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_BURS3 (Coproporphyrinogen-III oxidase, aerobic OS=Burkholderia sp. (strain 383) GN=hemF PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.397e-35 Identity = 67/157 (42.68%), Postives = 93/157 (59.24%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S VLHP+NP+ PT+H N R P + P +WFGGG DLTP Y FE+D +HFH T K A D F YPRFKKWCD+YF++KH FFDD ++ E ++ ++AY+PI+E+R + P+ ++ + +Q RRG Sbjct: 93 FEALGVSLVLHPRNPYCPTVHMNVRMLIATKPGEEP----VFWFGGGMDLTPVYGFEDDARHFHQTCKDALDPFGVELYPRFKKWCDEYFFLKHRNEMRGIGGIFFDDFSEPGFERSFDMMQSVGDAFLQAYLPIVERRAELPYGERERDFQAYRRG 245
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_SHESW (Coproporphyrinogen-III oxidase, aerobic OS=Shewanella sp. (strain W3-18-1) GN=hemF PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.383e-35 Identity = 72/157 (45.86%), Postives = 92/157 (58.60%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP NP+ PT H N R+F A K+ GA WWFGGG DLTP Y FEEDV+ +H T K F YP++KKWCD+YF++ H FFDDLN E SF N + AY PI+E+RK+T F ++ + +Q RRG Sbjct: 88 FEAMGVSLVIHPNNPYIPTTHANVRFFI--AQKE--GADPVWWFGGGFDLTPYYPFEEDVREWHQTSKDICAPFGDEVYPKYKKWCDEYFFLPHRNETRGVGGLFFDDLNQDGFEQSFSFMQAVGNGFLTAYAPIVERRKETEFGERERQFQLYRRG 240
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_SHEPC (Coproporphyrinogen-III oxidase, aerobic OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=hemF PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.383e-35 Identity = 72/157 (45.86%), Postives = 92/157 (58.60%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP NP+ PT H N R+F A K+ GA WWFGGG DLTP Y FEEDV+ +H T K F YP++KKWCD+YF++ H FFDDLN E SF N + AY PI+E+RK+T F ++ + +Q RRG Sbjct: 88 FEAMGVSLVIHPNNPYIPTTHANVRFFI--AQKE--GADPVWWFGGGFDLTPYYPFEEDVREWHQTSKDICAPFGDEVYPKYKKWCDEYFFLPHRNETRGVGGLFFDDLNQDGFEQSFSFMQAVGNGFLTAYAPIVERRKETEFGERERQFQLYRRG 240
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_SALEP (Coproporphyrinogen-III oxidase, aerobic OS=Salmonella enteritidis PT4 (strain P125109) GN=hemF PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.383e-35 Identity = 70/157 (44.59%), Postives = 90/157 (57.32%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP NP+ PT H N R+F + P GA WWFGGG DLTP Y FEED H+H T + F YPR+KKWCDDYF++KH FFDDLN D + +F N AY+PI+E+RK + ++ + +Q RRG Sbjct: 86 FEAMGVSLVVHPHNPYIPTSHANVRFFIAEKP----GADPVWWFGGGLDLTPYYGFEEDAVHWHRTARDLCQPFGDNVYPRYKKWCDDYFFLKHRNEQRGIGGLFFDDLNTPDFDHCFAFMQAVGNGYTEAYLPIVERRKAMVWGERERNFQLYRRG 238 The following BLAST results are available for this feature:
BLAST of CX306419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306419 ID=CX306419; Name=CX306419; organism=Citrus clementina; type=EST; length=558bpback to top |