CX306419
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_SHIF8 (Coproporphyrinogen-III oxidase, aerobic OS=Shigella flexneri serotype 5b (strain 8401) GN=hemF PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 5.308e-35 Identity = 70/157 (44.59%), Postives = 89/157 (56.69%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP NP+ PT H N R+F + P GA WWFGGG DLTP Y FEED H+H T + F YPR+KKWCDDYFY+KH FFDDLN D + +F AY+PI+E+RK + ++ + +Q RRG Sbjct: 86 FEAMGVSLVVHPHNPYVPTSHANVRFFIAEKP----GAEPVWWFGGGFDLTPFYGFEEDAIHWHRTARDLCQPFGEDVYPRYKKWCDDYFYLKHRNEQRGIGGLFFDDLNTPDFDHCFAFMQAVGKGYTDAYLPIVERRKAMAYGERERNFQLYRRG 238
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_PECCP (Coproporphyrinogen-III oxidase, aerobic OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=hemF PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 5.308e-35 Identity = 68/157 (43.31%), Postives = 90/157 (57.32%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP +P+ PT H N R F + P + P WWFGGG DLTP Y F+ED H+H T F YPR+KKWCDDYF++KH FFDDLN+ D +F N + Y+PI+E+RKD P+ ++ + +Q RRG Sbjct: 86 FQAMGVSLVIHPLSPYIPTSHANVRLFIAEKPGEEP----VWWFGGGFDLTPYYGFKEDAVHWHQTAHDLCQPFGDEVYPRYKKWCDDYFFLKHRNEARGIGGLFFDDLNEPDFATSFAFIRAVGNGFLDGYLPIVERRKDLPWGEREREFQLYRRG 238
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_ENT38 (Coproporphyrinogen-III oxidase, aerobic OS=Enterobacter sp. (strain 638) GN=hemF PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 5.308e-35 Identity = 69/157 (43.95%), Postives = 91/157 (57.96%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP++PF PT H N R+F + P GA WWFGGG DLTP Y FEED H+H T + F YP++KKWCDDYFY+KH FFDDLN D + +F AY+PI+E+R++T + + + +Q RRG Sbjct: 86 FEAMGVSLVVHPQSPFVPTSHANVRFFIAEKP----GADPVWWFGGGFDLTPYYGFEEDAVHWHRTARDICQPFGEEVYPKYKKWCDDYFYLKHRDEQRGIGGLFFDDLNAPDFDTAFNFMQAVGQGYTDAYLPIVERRRNTDYGVREREFQLYRRG 238
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_BURCJ (Coproporphyrinogen-III oxidase, aerobic OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=hemF PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 5.308e-35 Identity = 66/157 (42.04%), Postives = 92/157 (58.60%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S VLHP+NP+ PT+H N R P + P +WFGGG DLTP Y FE+D +HFH T K A D F YPRFK+WCD+YF++KH FFDD ++ E ++ + AY+PI+E+R + P+ ++ + +Q RRG Sbjct: 93 FEALGVSLVLHPRNPYCPTVHMNVRMLIATKPGEAP----VFWFGGGMDLTPVYGFEDDARHFHQTCKDALDPFGIELYPRFKQWCDEYFFLKHRNETRGIGGIFFDDFSEPGFERSFDLMQSVGDAFLHAYLPIVERRAELPYGERERDFQAYRRG 245
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_BORPD (Coproporphyrinogen-III oxidase, aerobic OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=hemF PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 5.308e-35 Identity = 66/157 (42.04%), Postives = 94/157 (59.87%), Query Frame = 3 Query: 93 AAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQ--WWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 A G+S VLHP+NP+ PT H N R F A PG +WFGGG DLTP Y FE+D +HFH ++A D +YP++K+WCD+YFY+KH FFDDLN+ + + ++ + AY+PI+++R+DTP+T + +Q RRG Sbjct: 89 AMGVSLVLHPRNPYVPTTHMNVRMFVAAA---RPGHDENDVFWFGGGLDLTPYYAFEDDARHFHQVCRAALDPHGAAYYPQYKRWCDEYFYLKHRQEMRGVGGVFFDDLNEPGFDASFALLRSVGDAFLPAYLPIVQRRRDTPYTQAQRDFQAYRRG 242
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM62_ANASP (Coproporphyrinogen-III oxidase, aerobic 2 OS=Anabaena sp. (strain PCC 7120) GN=hemF2 PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 5.308e-35 Identity = 73/182 (40.11%), Postives = 97/182 (53.30%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFD----------------DLNDYDQ---------EMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 FFA G S VLHP+NP+ PT+H NYRYFE A WWFGGG DLTP Y F+ED HFH T K+A D +P +YP FK+WCD+YFY++H FFD + Y Q E + +F C + + AY+PI+E+R+ + D+ + +Q RRG Sbjct: 113 FFATGTSMVLHPRNPYVPTVHLNYRYFE---------AGPIWWFGGGADLTPYYAFKEDAVHFHQTLKNACDVHNPEYYPTFKRWCDEYFYLRHREEQRGIGGIFFDYQDASGKLYVESQTDSSVAIYSQKVGNVARNWEDIFAFVQSCGQAFLPAYLPIVERRQGIEYGDRQRNFQLYRRG 285
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_THEEB (Coproporphyrinogen-III oxidase, aerobic OS=Thermosynechococcus elongatus (strain BP-1) GN=hemF PE=3 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 6.933e-35 Identity = 71/184 (38.59%), Postives = 96/184 (52.17%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEM---------------------------LLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F+A G S VLHP+NP+ PT+H NYRYFE A WWFGGG DLTP Y F ED KHFH ++A D+ +YP FK+WCD+YFY+KH FFD + D+E+ L +F C + + AY+PI+E+R+ + D+ + +Q RRG Sbjct: 98 FYATGTSMVLHPRNPYVPTVHLNYRYFE---------AGPVWWFGGGADLTPYYPFAEDAKHFHQVHQAACDRHHREYYPVFKRWCDEYFYLKHRGETRGVGGIFFDYQDGSDRELYRGPNPDGEAARYSQRVGSIGSRSWEDLFAFIQSCGQAFLEAYLPIVERRRHLTYGDRERQFQLYRRG 272
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_SERP5 (Coproporphyrinogen-III oxidase, aerobic OS=Serratia proteamaculans (strain 568) GN=hemF PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 6.933e-35 Identity = 69/157 (43.95%), Postives = 89/157 (56.69%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP++P+ PT H N R+F + P + P WWFGGG DLTP Y FEED H+H T + F YP++KKWCDDYF+IKH FFDDLN D +F + AY+PI+EKRK + D + +Q RRG Sbjct: 88 FQAMGVSLVIHPRSPYIPTSHANVRFFIAEKPGEEP----VWWFGGGFDLTPFYGFEEDAVHWHRTAERLCAPFGEQVYPKYKKWCDDYFFIKHRNEARGIGGLFFDDLNTPDFATCFAFTQAVGEGFLEAYLPIVEKRKTLSWGDHERQFQLYRRG 240
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_IDILO (Coproporphyrinogen-III oxidase, aerobic OS=Idiomarina loihiensis GN=hemF PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 6.933e-35 Identity = 66/157 (42.04%), Postives = 91/157 (57.96%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP+NP PT+H N R+F + P WWFGGG DLTP Y F++D+ +H K+A D D YP +K WCDDYF++KH FFDDLND + S ++ +AY+PI+E+RK+ +T Q + +Q RRG Sbjct: 88 FNACGVSLVMHPENPMVPTVHMNVRFFIAQKEGEEP----VWWFGGGFDLTPFYPFDQDIIEWHQQAKNALDSVDEKLYPEYKAWCDDYFFLKHRDEARGVGGIFFDDLNDRSFDECFSVIKAVGDAFTKAYLPIVERRKNLAYTQQQRDFQLYRRG 240
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_ECOSM (Coproporphyrinogen-III oxidase, aerobic OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=hemF PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 6.933e-35 Identity = 69/157 (43.95%), Postives = 89/157 (56.69%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP NP+ PT H N R+F + P GA WWFGGG DLTP Y FEED H+H T + F YPR+KKWCD+YFY+KH FFDDLN D + +F AY+PI+E+RK + ++ + +Q RRG Sbjct: 86 FEAMGVSLVVHPHNPYVPTSHANVRFFIAEKP----GAEPVWWFGGGFDLTPFYGFEEDAIHWHRTARDLCQPFGEDVYPRYKKWCDEYFYLKHRNEQRGIGGLFFDDLNTPDFDHCFAFMQAVGKGYTNAYLPIVERRKTMAYGERERNFQLYRRG 238 The following BLAST results are available for this feature:
BLAST of CX306419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306419 ID=CX306419; Name=CX306419; organism=Citrus clementina; type=EST; length=558bpback to top |