CX308512

Overview
NameCX308512
Unique NameCX308512
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length610
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX308512 vs. ExPASy Swiss-Prot
Match: RS17E_META3 (30S ribosomal protein S17e OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps17e PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.007e-11
Identity = 29/61 (47.54%), Postives = 46/61 (75.41%), Query Frame = 1 
Query:   79 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRI 261
            MGR+R   +K++   ++E+Y  R+T DF TNKK+++EVA I +KRLRN++AG+ T  MK++
Sbjct:    1 MGRIRQTFIKRAGEDLVEKYEDRLTTDFETNKKVIDEVAEIATKRLRNRVAGYVTKKMKKV 61
The following BLAST results are available for this feature:
BLAST of CX308512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
RS17E_META31.007e-1147.5430S ribosomal protein S17e OS=Methanococcus aeolic... [more]

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Properties
Property NameValue
Genbank descriptionC20010G09SK OF2 Citrus clementina cDNA clone C20010G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX308512 ID=CX308512; Name=CX308512; organism=Citrus clementina; type=EST; length=610bp
ATCTCTTGACATCTCAAGCTCTTCTGCTTCACCGTCTTTGTCTTCTTCAA
GACAGCAGCAGCAGCTTCTTAAACTGAAATGGGTCGTGTTCGTACCAAGA
CCGTGAAGAAGTCCTCTCGCCAGGTGATTGAGAGGTACTACTCAAGAATG
ACACTGGACTTCCATACCAACAAGAAGATTTTGGAGGAGGTTGCTATCAT
CCCCTCGAAGAGGCTGCGTAACAAAATTGCTGGGTTCTCAACCCATTTGA
TGAAGAGGATTCAGAAGGGTCCAGTTCGTGGAATCTCCCTTAAATTGCAG
GAAGAGGAGCGCGAACGCCGCATGGACTTTGTGCCTGATGAGTCAGCTAT
TAAGACTGATGAAATTAAGGTTGACAAGGAAACCTTGGATATGCTTGCTG
CTCTTGGCATGTCTGACATTTCTGGGCTTGTTGAAGTTGAGCCACAGAGC
ATGATTGCTCCTCCAGTTTTTGGTCGGGGTGGTGGCAGGAGGTACTGAGT
TAATTGAGGCTTTGTGGCTCAATCAAGAATGAGAAGTTTAGGTTCTTATT
AATCAGTACTTCTTGTGTTTGTTATGAATGCTTTTGTGACTAGTTTTCTT
TACTATTTTA
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