CX308514
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308514 vs. ExPASy Swiss-Prot
Match: MUG89_SCHPO (Meiotically up-regulated gene 89 protein OS=Schizosaccharomyces pombe GN=mug89 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 9.142e-22 Identity = 69/192 (35.94%), Postives = 101/192 (52.60%), Query Frame = 2 Query: 98 SKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPVANRTDKVAFIQS---TAS------------------------------KTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKTSET---SQCEPEDTTPNGKPIVPCGLIAWSLFNDTYT 565 + F QQ + + +P+LTPK V+ F V+GI F P+G L AS V E+V Y TDC +A+ D+ + + S TAS C + TV +K P+++YY+L NF+QNHRRY KS +++QL+ + T++ C P + + KP PCGLIA SLFNDT++ Sbjct: 27 TSFRQQRIKSWQPLLTPKIVLPLFFVLGIIFGPLGGGLLYASSIVQELVVDY-TDCETLASY-DEFSAVPSKKYTASFDQSGTIGFDKESTYWKLEKILDKDLDMDVNYCIIRFTVPSVLKAPIFIYYRLTNFFQNHRRYAKSVDEKQLQGVALTADEVKGGNCFPLEVNEDDKPYYPCGLIANSLFNDTFS 216
BLAST of CX308514 vs. ExPASy Swiss-Prot
Match: CC50B_MOUSE (Cell cycle control protein 50B OS=Mus musculus GN=Tmem30b PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.252e-19 Identity = 58/161 (36.02%), Postives = 84/161 (52.17%), Query Frame = 2 Query: 104 FTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYET-----DCIPVANRTDKVAFIQSTASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKT--SETSQCEPEDTTPNGKPIVPCGLIAWSLFNDTYT 565 FTQQ LPA +P+L+ + F G+AF+ +G+ +S + E+ Y DC A + A A C+ T+ + PVY+YY+L NFYQN+RRY SR+D QL + ++C P +G PI PCG IA SLFND+++ Sbjct: 18 FTQQRLPAWQPLLSAGIALPLFFCAGLAFIGLGLGLFYSSNGIKELEYDYTGNPGTGDCSVCAAKGQGRAPPPGCA---CSWSFTLPELFPGPVYLYYELSNFYQNNRRYGVSRDDAQLSGLASALRHPANECAPYQFRSDGLPIAPCGAIANSLFNDSFS 175
BLAST of CX308514 vs. ExPASy Swiss-Prot
Match: YN8S_YEAST (Uncharacterized protein YNR048W OS=Saccharomyces cerevisiae GN=YNR048W PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.247e-19 Identity = 62/179 (34.64%), Postives = 93/179 (51.96%), Query Frame = 2 Query: 98 SKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRY-ETDCIPVANRTDKVA-------FIQSTA--------------SKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKTSE--TSQCEPEDTTPNGKPIVPCGLIAWSLFNDTY 562 + F QQ L A +PIL+P+ V+ +++ F PIGI ++++ V +V Y E D + A + + F + A ++TC Q V H+K+ YVYY+L NF QN+R YV+S + +QLK ++ C+P T N K I PCGLIA S+FNDT+ Sbjct: 28 TSFRQQRLKAWQPILSPQSVLPLLILMACVFAPIGIGLVVSTISVQRLVVNYTECDALAPAKHFETIPSEYVDYHFSKKVAVQPQWMVLTDPELGNQTCRIQFEVPNHIKKSTYVYYRLTNFNQNYREYVQSLDLDQLKGKALIGNDLDPNCDPLRTVEN-KTIFPCGLIANSMFNDTF 205
BLAST of CX308514 vs. ExPASy Swiss-Prot
Match: CC50A_RAT (Cell cycle control protein 50A OS=Rattus norvegicus GN=Tmem30a PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 5.546e-19 Identity = 58/154 (37.66%), Postives = 76/154 (49.35%), Query Frame = 2 Query: 104 FTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPVANRTDKVAFIQSTASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLK--KRSKTSETSQCEPEDTTPNGKPIVPCGLIAWSLFNDT 559 F QQ LPA +PILT V+ TF ++G+ F+PIGI + S ++ EI V++YY L NFYQNHRRYVKSR+D QL + + + +CEP + KPI PCG IA S+FNDT Sbjct: 33 FKQQRLPAWQPILTAGTVLPTFFIIGLIFIPIGIGIFVTSNNIREIEGN---------------------------------------VFMYYGLSNFYQNHRRYVKSRDDSQLNGDPSALLNPSKECEPYRRNED-KPIAPCGAIANSMFNDT 146
BLAST of CX308514 vs. ExPASy Swiss-Prot
Match: CC50B_HUMAN (Cell cycle control protein 50B OS=Homo sapiens GN=TMEM30B PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 9.460e-19 Identity = 57/159 (35.85%), Postives = 85/159 (53.46%), Query Frame = 2 Query: 104 FTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPVANRTDKVAFIQSTASK---TCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLK--KRSKTSETSQCEPEDTTPNGKPIVPCGLIAWSLFNDTYT 565 FTQQ LPA +P+L+ + F G+AF+ +G+ +S + E+ Y D N + A Q A +C ++ + + PVY+YY+L NFYQN+RRY SR+D QL + ++C P + G PI PCG IA SLFND+++ Sbjct: 18 FTQQRLPAWQPLLSASIALPLFFCAGLAFIGLGLGLYYSSNGIKELEYDYTGDP-GTGNCSVCAAAGQGRALPPPCSCAWYFSLPELFQGPVYLYYELTNFYQNNRRYGVSRDDAQLSGLPSALRHPVNECAPYQRSAAGLPIAPCGAIANSLFNDSFS 175
BLAST of CX308514 vs. ExPASy Swiss-Prot
Match: CC50C_MACFA (Cell cycle control protein 50C OS=Macaca fascicularis GN=TMEM30C PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 6.132e-18 Identity = 56/154 (36.36%), Postives = 77/154 (50.00%), Query Frame = 2 Query: 98 SKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPVANRTDKVAFIQSTASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPNGKPIVPCGLIAWSLFNDT 559 S QQELPA + T + V+ F GI + +GI +L++R EI Y C A + + TC+ ++ M VY+YY+L FYQN RYV+SR++ QL + C P + N PIVPCG IA S+FNDT Sbjct: 16 SALKQQELPAHRLYFTARRVLFVFFTTGIFCLCMGIILILSARSTQEIEINYTRICANCAKLRENASNFDKEC--TCSIPFYLSGKMMGNVYMYYKLYGFYQNLYRYVRSRSNRQLVGKD-VKAVEDCAPFKMSDNKTPIVPCGAIANSMFNDT 166
BLAST of CX308514 vs. ExPASy Swiss-Prot
Match: LEM3_YEAST (Alkylphosphocholine resistance protein LEM3 OS=Saccharomyces cerevisiae GN=LEM3 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 8.009e-18 Identity = 60/187 (32.09%), Postives = 87/187 (46.52%), Query Frame = 2 Query: 104 FTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPVA----------------------NRTDKVAFIQSTASK------TCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKTSET------SQCEPEDTTPNGKPIVPCGLIAWSLFNDTY 562 FTQQ L A P+LTP+ V+ +L++ + FV +G +LA V+ V Y DC+ A N + F+ + TC + T MK VY+ Y L+ F NHRRYV S +++Q++ + ET C+P +GK PCGLIA S+FNDT+ Sbjct: 58 FTQQRLAAINPVLTPRTVLPLYLLIAVVFVIVG-GCILAQNSKVDEVTIYYQDCMTNATSSWSDIPSEHWQFVFHKYKTYNTAPQWRFVDDESDDFTKQRGTCQIRFTTPSDMKNNVYLNYVLEKFAANHRRYVLSFSEDQIRGEDASYETVHDATGINCKPLSKNADGKIYYPCGLIANSMFNDTF 243
BLAST of CX308514 vs. ExPASy Swiss-Prot
Match: CC50C_BOVIN (Cell cycle control protein 50C OS=Bos taurus GN=TMEM30C PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.366e-17 Identity = 51/150 (34.00%), Postives = 80/150 (53.33%), Query Frame = 2 Query: 110 QQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPVANRTDKVAFIQSTASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPNGKPIVPCGLIAWSLFNDT 559 QQ+LPA + LT ++ F +G+ + +GI LL+++ + E+ Y C A ++ + C+ + + M+ VY+YY+L FYQN RY+ SR++ QL + + C P T+ NG PI PCG IA S+FNDT Sbjct: 20 QQQLPAFRLQLTASEILSGFFAIGLFCLGMGIILLLSAKSIKEVEINYTEKCATCAKLREEATNFDKECN--CSISFYLPQKMEGNVYLYYKLYGFYQNLYRYILSRSNIQLVG-ADVKDVRNCAPFRTSDNGLPIAPCGAIANSMFNDT 166
BLAST of CX308514 vs. ExPASy Swiss-Prot
Match: CDC50_YEAST (Cell division control protein 50 OS=Saccharomyces cerevisiae GN=CDC50 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.973e-16 Identity = 55/177 (31.07%), Postives = 89/177 (50.28%), Query Frame = 2 Query: 104 FTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYET----------DCIP-----------VANRTDKVAFIQSTASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQL--KKRSKTSETSQCEPEDTTPNGKPIVPCGLIAWSLFNDTYT 565 F QQ L A +PIL+P+ V+ + V F PIGI ++++ V ++ Y + IP V N+ ++C Q + +K+ +++YY++ NFYQNHRRYV+S + +Q+ + K + C P + + K I PCGLIA S+FNDT++ Sbjct: 28 FRQQRLKAWQPILSPQSVLPLLIFVACIFTPIGIGLIVSATKVQDLTIDYSHCDTKASTTAFEDIPKKYIKYHFKSKVENKPQWRLTENENGEQSCELQFEIPNDIKKSIFIYYKITNFYQNHRRYVQSFDTKQILGEPIKKDDLDTSCSPIRSRED-KIIYPCGLIANSMFNDTFS 203
BLAST of CX308514 vs. ExPASy Swiss-Prot
Match: CC50C_MOUSE (Cell cycle control protein 50C OS=Mus musculus GN=Tmem30c PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.670e-15 Identity = 52/154 (33.77%), Postives = 79/154 (51.30%), Query Frame = 2 Query: 110 QQELPACKPILTPKWVILTFLVVGIAFVPIGITSLLASRDVVEIVDRYETDCIPVANRTDKVAFIQSTASKTCTRQIT--VTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPNGKPIVPCGLIAWSLFNDTYT 565 QQ LP + L+ V+ F + G + IGI LL+++ +I Y C A + S K C + + + M+ VY+YY+L FYQN +Y+ SR++ QL + +T+ C+P + N PI+PCG IA S+FNDT T Sbjct: 20 QQTLPTQQLNLSASVVLSIFFITGGFCLSIGIILLLSAKSTKKIEINYTKTCANCAQLREN----SSNFDKACNYSLPFYLPEKMEGDVYMYYKLYGFYQNLYQYILSRSNSQLVGKD-IWDTTNCDPFQVSHNDTPIIPCGAIANSIFNDTIT 168 The following BLAST results are available for this feature:
BLAST of CX308514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308514 ID=CX308514; Name=CX308514; organism=Citrus clementina; type=EST; length=566bpback to top |