CX308516
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308516 vs. ExPASy Swiss-Prot
Match: CH10_EXISA (10 kDa chaperonin OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=groS PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.666e-13 Identity = 40/91 (43.96%), Postives = 55/91 (60.44%), Query Frame = 2 Query: 296 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKP-QXXXXXXXXXXXXXXXXXLDISVKPGTQVIYSKYAWTELEFNGAHHLILREDDVVGI 565 +KPLGDRV++++ EEKT GGI LP TA+ KP Q +D+ VK VIYSKYA TE++ +G +LI+RE D++ I Sbjct: 2 LKPLGDRVIIEVVEKEEKTIGGIVLPDTAKEKPQQGKVVAVGTGRVTDEGKRIDLDVKENDLVIYSKYAGTEVKHDGKEYLIVRESDILAI 92
BLAST of CX308516 vs. ExPASy Swiss-Prot
Match: CH10_DESVV (10 kDa chaperonin OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=groS PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.666e-13 Identity = 38/92 (41.30%), Postives = 56/92 (60.87%), Query Frame = 2 Query: 293 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQXXXXXXXXXXXXXXXXXL-DISVKPGTQVIYSKYAWTELEFNGAHHLILREDDVVGI 565 ++KPL DRVLVK EEKT GG+++P TA+ KP L ++VK G V+++KYA TE++ +G HL++REDD++ I Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAAGPGKTADDGKLVAMTVKAGDMVLFNKYAGTEIKIDGVEHLVMREDDILAI 93
BLAST of CX308516 vs. ExPASy Swiss-Prot
Match: CH10_DESVH (10 kDa chaperonin OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=groS PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.666e-13 Identity = 38/92 (41.30%), Postives = 56/92 (60.87%), Query Frame = 2 Query: 293 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQXXXXXXXXXXXXXXXXXL-DISVKPGTQVIYSKYAWTELEFNGAHHLILREDDVVGI 565 ++KPL DRVLVK EEKT GG+++P TA+ KP L ++VK G V+++KYA TE++ +G HL++REDD++ I Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAAGPGKTADDGKLVAMTVKAGDMVLFNKYAGTEIKIDGVEHLVMREDDILAI 93
BLAST of CX308516 vs. ExPASy Swiss-Prot
Match: CH10_LAWIP (10 kDa chaperonin OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=groS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.548e-13 Identity = 37/92 (40.22%), Postives = 56/92 (60.87%), Query Frame = 2 Query: 293 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQXXXXXXXXXXXXXXXXXL-DISVKPGTQVIYSKYAWTELEFNGAHHLILREDDVVGI 565 ++KPL DRVLVK EEKT GG+++P TA+ KP L ++VK G V+++KYA TE++ +G HL++REDD++ + Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAVGPGKHTDDGKLIPMAVKAGDTVLFNKYAGTEVKLDGVEHLVMREDDILAV 93
BLAST of CX308516 vs. ExPASy Swiss-Prot
Match: CH10_LAWIN (10 kDa chaperonin OS=Lawsonia intracellularis GN=groS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.548e-13 Identity = 37/92 (40.22%), Postives = 56/92 (60.87%), Query Frame = 2 Query: 293 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQXXXXXXXXXXXXXXXXXL-DISVKPGTQVIYSKYAWTELEFNGAHHLILREDDVVGI 565 ++KPL DRVLVK EEKT GG+++P TA+ KP L ++VK G V+++KYA TE++ +G HL++REDD++ + Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAVGPGKHTDDGKLIPMAVKAGDTVLFNKYAGTEVKLDGVEHLVMREDDILAV 93
BLAST of CX308516 vs. ExPASy Swiss-Prot
Match: CH10_CLOPS (10 kDa chaperonin OS=Clostridium perfringens (strain SM101 / Type A) GN=groS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.548e-13 Identity = 38/91 (41.76%), Postives = 53/91 (58.24%), Query Frame = 2 Query: 293 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQXXXXXXXXXXXXXXXXXLDISVKPGTQVIYSKYAWTELEFNGAHHLILREDDVVGI 565 SIKPLGDRV++K EE T GI + TA+ +PQ ++ VK G +V+YSKYA TE++F G + ILR+DD++ I Sbjct: 2 SIKPLGDRVVIKRLEAEETTKSGIIVTGTAKERPQEAEVVAVGPGAIIDGKRTEMEVKIGDKVLYSKYAGTEVKFEGEEYTILRQDDILAI 92
BLAST of CX308516 vs. ExPASy Swiss-Prot
Match: CH10_CLOPE (10 kDa chaperonin OS=Clostridium perfringens GN=groS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.548e-13 Identity = 38/91 (41.76%), Postives = 53/91 (58.24%), Query Frame = 2 Query: 293 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQXXXXXXXXXXXXXXXXXLDISVKPGTQVIYSKYAWTELEFNGAHHLILREDDVVGI 565 SIKPLGDRV++K EE T GI + TA+ +PQ ++ VK G +V+YSKYA TE++F G + ILR+DD++ I Sbjct: 2 SIKPLGDRVVIKRLEAEETTKSGIIVTGTAKERPQEAEVVAVGPGAIVDGKRTEMEVKIGDKVLYSKYAGTEVKFEGEEYTILRQDDILAI 92
BLAST of CX308516 vs. ExPASy Swiss-Prot
Match: CH10_CLOP1 (10 kDa chaperonin OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=groS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.548e-13 Identity = 38/91 (41.76%), Postives = 53/91 (58.24%), Query Frame = 2 Query: 293 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQXXXXXXXXXXXXXXXXXLDISVKPGTQVIYSKYAWTELEFNGAHHLILREDDVVGI 565 SIKPLGDRV++K EE T GI + TA+ +PQ ++ VK G +V+YSKYA TE++F G + ILR+DD++ I Sbjct: 2 SIKPLGDRVVIKRLEAEETTKSGIIVTGTAKERPQEAEVVAVGPGAIVDGKRTEMEVKIGDKVLYSKYAGTEVKFEGEEYTILRQDDILAI 92
BLAST of CX308516 vs. ExPASy Swiss-Prot
Match: CH10_SYNJB (10 kDa chaperonin OS=Synechococcus sp. GN=groS PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.939e-13 Identity = 40/93 (43.01%), Postives = 56/93 (60.22%), Query Frame = 2 Query: 290 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQXXXXXXXXXXXXXXXXXL-DISVKPGTQVIYSKYAWTELEFNGAHHLILREDDVVGI 565 +++KPLGDRVLVKI +EKT GGIFLP TA+ KPQ L + +K G +V+YSKYA TE++ +++L E D++ I Sbjct: 9 STLKPLGDRVLVKIAQQDEKTAGGIFLPDTAKEKPQVGEVVAVGPGKRNDEGKLIPMELKAGDKVLYSKYAGTEVKLGSDEYVLLAERDILAI 101
BLAST of CX308516 vs. ExPASy Swiss-Prot
Match: CH10_SYNJA (10 kDa chaperonin OS=Synechococcus sp. (strain JA-3-3Ab) GN=groS PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.939e-13 Identity = 40/93 (43.01%), Postives = 56/93 (60.22%), Query Frame = 2 Query: 290 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQXXXXXXXXXXXXXXXXXL-DISVKPGTQVIYSKYAWTELEFNGAHHLILREDDVVGI 565 +++KPLGDRVLVKI +EKT GGIFLP TA+ KPQ L + +K G +V+YSKYA TE++ +++L E D++ I Sbjct: 9 STLKPLGDRVLVKIAQQDEKTAGGIFLPDTAKEKPQVGEVVAVGPGKRNDEGKLIPMELKAGDRVLYSKYAGTEVKLGSDEYVLLAERDILAI 101 The following BLAST results are available for this feature:
BLAST of CX308516 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 131
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX308516 ID=CX308516; Name=CX308516; organism=Citrus clementina; type=EST; length=566bpback to top |