CX308516
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308516 vs. ExPASy Swiss-Prot
Match: CH10_CYAP7 (10 kDa chaperonin OS=Cyanothece sp. (strain PCC 7424) GN=groS PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.257e-12 Identity = 38/91 (41.76%), Postives = 53/91 (58.24%), Query Frame = 2 Query: 290 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQXXXXXXXXXXXXXXXXXLD-ISVKPGTQVIYSKYAWTELEFNGAHHLILREDDVV 559 +++KPLGDRV VK+ EEKT GGI LP TA+ KPQ I VK G +V+YSKYA T+++ G +++L E D++ Sbjct: 9 STVKPLGDRVFVKVSPSEEKTAGGILLPDTAKEKPQLGEVVAVGPGKRNDDGSRSPIEVKVGDKVLYSKYAGTDIKLGGEDYVLLSEKDIL 99
BLAST of CX308516 vs. ExPASy Swiss-Prot
Match: CH10_CYAA5 (10 kDa chaperonin OS=Cyanothece sp. (strain ATCC 51142) GN=groS PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.257e-12 Identity = 36/91 (39.56%), Postives = 54/91 (59.34%), Query Frame = 2 Query: 290 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQ-XXXXXXXXXXXXXXXXXLDISVKPGTQVIYSKYAWTELEFNGAHHLILREDDVV 559 +++KPLGDR+ VK+ EEKT GGI LP AQ KPQ ++ VK G +V+YSKYA T+++ +G +++L E D++ Sbjct: 9 STVKPLGDRIFVKVSPAEEKTAGGILLPDNAQEKPQIGEVVAVGPGKRNDDGSRSELDVKVGDKVLYSKYAGTDVKLSGEDYVLLSEKDIL 99
BLAST of CX308516 vs. ExPASy Swiss-Prot
Match: CH10_CYAP8 (10 kDa chaperonin OS=Cyanothece sp. (strain PCC 8801) GN=groS PE=3 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 2.948e-12 Identity = 37/93 (39.78%), Postives = 54/93 (58.06%), Query Frame = 2 Query: 290 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQ-XXXXXXXXXXXXXXXXXLDISVKPGTQVIYSKYAWTELEFNGAHHLILREDDVVGI 565 +++KPLGDRV VK+ EEKT GGI LP TA+ KPQ + VK G +V+YSKYA T+++ G +++L E D++ + Sbjct: 9 STVKPLGDRVFVKVSASEEKTAGGILLPDTAKEKPQIGEIVTVGPGKRNDDGSRSEPEVKVGDKVLYSKYAGTDIKLGGEDYVLLSEKDILAV 101
BLAST of CX308516 vs. ExPASy Swiss-Prot
Match: CH10_CLONN (10 kDa chaperonin OS=Clostridium novyi (strain NT) GN=groS PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.948e-12 Identity = 36/90 (40.00%), Postives = 54/90 (60.00%), Query Frame = 2 Query: 296 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQXXXXXXXXXXXXXXXXXLDISVKPGTQVIYSKYAWTELEFNGAHHLILREDDVVGI 565 IKPLGDRV++K EEKT GI LP +A+ KPQ + + VK G +V++SKY+ TE++ +G + ILR++D++ I Sbjct: 3 IKPLGDRVVIKRLEAEEKTKSGIVLPGSAKEKPQEAEIVAVGPGGLVDGKEVRMEVKVGDKVLFSKYSGTEVKLDGEEYTILRQNDILAI 92
BLAST of CX308516 vs. ExPASy Swiss-Prot
Match: CH10_CLOBO (10 kDa chaperonin OS=Clostridium botulinum GN=groS PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.948e-12 Identity = 35/90 (38.89%), Postives = 55/90 (61.11%), Query Frame = 2 Query: 296 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQXXXXXXXXXXXXXXXXXLDISVKPGTQVIYSKYAWTELEFNGAHHLILREDDVVGI 565 IKPLGDRV++K EEKT GI LP +A+ KPQ +++ VK G +V++S+YA E++ +G ++ILR++D++ I Sbjct: 3 IKPLGDRVVIKRLEAEEKTKSGIVLPGSAKEKPQEAEIVAVGPGGLVDGKEVNMEVKVGDRVLFSQYAGNEVKIDGEEYIILRQNDILAI 92
BLAST of CX308516 vs. ExPASy Swiss-Prot
Match: CH10_PELPB (10 kDa chaperonin OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=groS PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.850e-12 Identity = 36/92 (39.13%), Postives = 53/92 (57.61%), Query Frame = 2 Query: 293 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQ-XXXXXXXXXXXXXXXXXLDISVKPGTQVIYSKYAWTELEFNGAHHLILREDDVVGI 565 ++KPL DRV+VK EEKT GG+++P T + KPQ L++ VK G++V+Y KY+ TE+ G +LI+RE D+ I Sbjct: 2 NLKPLSDRVIVKPAAAEEKTKGGLYIPDTGKEKPQYGEVVAVGAGKIADNGQLLEMQVKVGSKVLYGKYSGTEVSVEGEDYLIMRESDIFAI 93
BLAST of CX308516 vs. ExPASy Swiss-Prot
Match: CH10_LEPIN (10 kDa chaperonin OS=Leptospira interrogans GN=groS PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.850e-12 Identity = 36/91 (39.56%), Postives = 52/91 (57.14%), Query Frame = 2 Query: 293 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQXXXXXXXXXXXXXXXXXLDISVKPGTQVIYSKYAWTELEFNGAHHLILREDDVVGI 565 SIKPLGDRVLV+ + E+ G IF+P TA+ KPQ + + VK G V+Y KY+ TE++ G +LI+RE D++ + Sbjct: 3 SIKPLGDRVLVEPRQEAEEKIGSIFVPDTAKEKPQEGKVVEIGSGKYEDGKLIPLEVKVGDTVLYGKYSGTEIKSEGKEYLIIRESDILAV 93
BLAST of CX308516 vs. ExPASy Swiss-Prot
Match: CH10_LEPIC (10 kDa chaperonin OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=groS PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.850e-12 Identity = 36/91 (39.56%), Postives = 52/91 (57.14%), Query Frame = 2 Query: 293 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQXXXXXXXXXXXXXXXXXLDISVKPGTQVIYSKYAWTELEFNGAHHLILREDDVVGI 565 SIKPLGDRVLV+ + E+ G IF+P TA+ KPQ + + VK G V+Y KY+ TE++ G +LI+RE D++ + Sbjct: 3 SIKPLGDRVLVEPRQEAEEKIGSIFVPDTAKEKPQEGKVVEIGSGKYEDGKLIPLEVKVGDTVLYGKYSGTEIKSEGKEYLIIRESDILAV 93
BLAST of CX308516 vs. ExPASy Swiss-Prot
Match: CH10_BACTR (10 kDa chaperonin OS=Bacillus thermoglucosidasius GN=groS PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.850e-12 Identity = 38/91 (41.76%), Postives = 55/91 (60.44%), Query Frame = 2 Query: 296 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQ-XXXXXXXXXXXXXXXXXLDISVKPGTQVIYSKYAWTELEFNGAHHLILREDDVVGI 565 IKPLGDRV+++I EEKT GI LP TA+ KPQ + V+ G ++I+SKYA TE++++G +LILRE D++ + Sbjct: 2 IKPLGDRVVIEIVETEEKTASGIVLPDTAKEKPQEGKVVAVGKGRVLDNGQRVAPEVEVGDRIIFSKYAGTEVKYDGKEYLILRESDILAV 92
BLAST of CX308516 vs. ExPASy Swiss-Prot
Match: CH10_BACSU (10 kDa chaperonin OS=Bacillus subtilis GN=groS PE=1 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 3.850e-12 Identity = 36/91 (39.56%), Postives = 55/91 (60.44%), Query Frame = 2 Query: 296 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQXXXXXXXXXXXXXXXXX-LDISVKPGTQVIYSKYAWTELEFNGAHHLILREDDVVGI 565 +KPLGDRV++++ EEKT GI LP +A+ KPQ + + VK G ++I+SKYA TE+++ G +LILRE D++ + Sbjct: 2 LKPLGDRVVIELVESEEKTASGIVLPDSAKEKPQEGKIVAAGSGRVLESGERVALEVKEGDRIIFSKYAGTEVKYEGTEYLILRESDILAV 92 The following BLAST results are available for this feature:
BLAST of CX308516 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 131
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308516 ID=CX308516; Name=CX308516; organism=Citrus clementina; type=EST; length=566bpback to top |