CX308516
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308516 vs. ExPASy Swiss-Prot
Match: CH10_BACA2 (10 kDa chaperonin OS=Bacillus amyloliquefaciens (strain FZB42) GN=groS PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.850e-12 Identity = 36/91 (39.56%), Postives = 55/91 (60.44%), Query Frame = 2 Query: 296 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQXXXXXXXXXXXXXXXXX-LDISVKPGTQVIYSKYAWTELEFNGAHHLILREDDVVGI 565 +KPLGDRV++++ EEKT GI LP +A+ KPQ + + VK G ++I+SKYA TE+++ G +LILRE D++ + Sbjct: 2 LKPLGDRVVIELVESEEKTASGIVLPDSAKEKPQEGKIVAAGSGRVLESGERVALEVKEGDRIIFSKYAGTEVKYEGTEYLILRESDILAV 92
BLAST of CX308516 vs. ExPASy Swiss-Prot
Match: CH10_TREDE (10 kDa chaperonin OS=Treponema denticola GN=groS PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.028e-12 Identity = 39/90 (43.33%), Postives = 51/90 (56.67%), Query Frame = 2 Query: 296 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQXXXXXXXXXXXXXXXXXLDISVKPGTQVIYSKYAWTELEFNGAHHLILREDDVVGI 565 +KPLGDRVLVK VE KT GGI +P TAQ K Q I V G +VI+ KYA T+++ +G HLIL+ +D+V + Sbjct: 3 VKPLGDRVLVKPDAVETKTAGGIIIPDTAQEKTQRGVVVAVGDDKE------KIKVSVGQKVIHDKYAGTQIQIDGVDHLILKSNDLVAV 86
BLAST of CX308516 vs. ExPASy Swiss-Prot
Match: CH10_LEPBL (10 kDa chaperonin OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=groS PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.028e-12 Identity = 36/91 (39.56%), Postives = 52/91 (57.14%), Query Frame = 2 Query: 293 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQXXXXXXXXXXXXXXXXXLDISVKPGTQVIYSKYAWTELEFNGAHHLILREDDVVGI 565 SIKPLGDRVLV+ + E+ G IF+P TA+ KPQ + + VK G V+Y KY+ TE++ G +LI+RE D++ + Sbjct: 3 SIKPLGDRVLVEPRQEAEEKIGSIFVPDTAKEKPQEGKVVEIGSGKYEDGKLVPLEVKVGDTVLYGKYSGTEIKSEGKEYLIIRESDILAV 93
BLAST of CX308516 vs. ExPASy Swiss-Prot
Match: CH10_LEPBJ (10 kDa chaperonin OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=groS PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.028e-12 Identity = 36/91 (39.56%), Postives = 52/91 (57.14%), Query Frame = 2 Query: 293 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQXXXXXXXXXXXXXXXXXLDISVKPGTQVIYSKYAWTELEFNGAHHLILREDDVVGI 565 SIKPLGDRVLV+ + E+ G IF+P TA+ KPQ + + VK G V+Y KY+ TE++ G +LI+RE D++ + Sbjct: 3 SIKPLGDRVLVEPRQEAEEKIGSIFVPDTAKEKPQEGKVVEIGSGKYEDGKLVPLEVKVGDTVLYGKYSGTEIKSEGKEYLIIRESDILAV 93
BLAST of CX308516 vs. ExPASy Swiss-Prot
Match: CH10_CLOB8 (10 kDa chaperonin OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=groS PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.028e-12 Identity = 36/91 (39.56%), Postives = 54/91 (59.34%), Query Frame = 2 Query: 293 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQXXXXXXXXXXXXXXXXXLDISVKPGTQVIYSKYAWTELEFNGAHHLILREDDVVGI 565 +IKPLG+RV++K EEKT GI L TA+ +PQ + + VK G +V+YSKYA TE++ +G + IL++DD++ I Sbjct: 2 NIKPLGERVVIKKLEAEEKTKSGIVLTGTAKERPQEAEVVAVGPGAVVDGNRVAMEVKVGDKVLYSKYAGTEVKVDGEEYTILKQDDILAI 92
BLAST of CX308516 vs. ExPASy Swiss-Prot
Match: CH10_BACLD (10 kDa chaperonin OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=groS PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.028e-12 Identity = 36/91 (39.56%), Postives = 55/91 (60.44%), Query Frame = 2 Query: 296 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQ-XXXXXXXXXXXXXXXXXLDISVKPGTQVIYSKYAWTELEFNGAHHLILREDDVVGI 565 +KPLGDRV++++ EEKT GI LP +A+ KPQ + + VK G ++I+SKYA TE+++ G +LILRE D++ + Sbjct: 2 LKPLGDRVVIELVESEEKTASGIVLPDSAKEKPQEGKVVAAGSGRVLESGERVALEVKTGDRIIFSKYAGTEVKYEGTDYLILRESDILAV 92
BLAST of CX308516 vs. ExPASy Swiss-Prot
Match: CH10_BACCN (10 kDa chaperonin OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=groS PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.028e-12 Identity = 36/91 (39.56%), Postives = 54/91 (59.34%), Query Frame = 2 Query: 296 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQ-XXXXXXXXXXXXXXXXXLDISVKPGTQVIYSKYAWTELEFNGAHHLILREDDVVGI 565 +KPLGDRV++++ EEKT GI LP TA+ KPQ + + V G ++I+SKYA TE+++ G +LILRE D++ + Sbjct: 2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDRIIFSKYAGTEVKYEGTDYLILRESDILAV 92
BLAST of CX308516 vs. ExPASy Swiss-Prot
Match: CH10_ANASP (10 kDa chaperonin OS=Anabaena sp. (strain PCC 7120) GN=groS PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.028e-12 Identity = 35/93 (37.63%), Postives = 55/93 (59.14%), Query Frame = 2 Query: 290 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQ-XXXXXXXXXXXXXXXXXLDISVKPGTQVIYSKYAWTELEFNGAHHLILREDDVVGI 565 +++KPLGDRV VK+ EEKT GG++LP TA+ KPQ ++ VK G +V+YSKYA T+++ +++L E D++ + Sbjct: 9 STVKPLGDRVFVKVSASEEKTAGGLYLPDTAKEKPQVGEVVALGAGKRNDDGSRQELEVKVGDKVLYSKYAGTDVKLGTEEYVLLSEKDILAV 101
BLAST of CX308516 vs. ExPASy Swiss-Prot
Match: CH10_TRIEI (10 kDa chaperonin OS=Trichodesmium erythraeum (strain IMS101) GN=groS PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.567e-12 Identity = 36/93 (38.71%), Postives = 55/93 (59.14%), Query Frame = 2 Query: 290 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQ-XXXXXXXXXXXXXXXXXLDISVKPGTQVIYSKYAWTELEFNGAHHLILREDDVVGI 565 +++KPLG+RV VK+ EEKT GGI LP +A+ KPQ ++ VK G +V+YSKYA T+++ G +++L E D++ I Sbjct: 9 STVKPLGERVFVKVSESEEKTAGGILLPDSAKEKPQVGEVVSAGPGKRNDDGTRAEMEVKVGDKVLYSKYAGTDIKLGGDEYVLLAEKDILAI 101
BLAST of CX308516 vs. ExPASy Swiss-Prot
Match: CH10_SYNY3 (10 kDa chaperonin OS=Synechocystis sp. (strain PCC 6803) GN=groS PE=1 SV=3) HSP 1 Score: 70.4774 bits (171), Expect = 6.567e-12 Identity = 36/91 (39.56%), Postives = 52/91 (57.14%), Query Frame = 2 Query: 290 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQXXXXXXXXXXXXXXXXXLD-ISVKPGTQVIYSKYAWTELEFNGAHHLILREDDVV 559 +++KPLGDRV VK+ EEKT GGI LP A+ KPQ + VK G +V+YSKYA T+++ G +++L E D++ Sbjct: 9 STVKPLGDRVFVKVSPAEEKTAGGILLPDNAKEKPQIGEVVQVGPGKRNDDGTYSPVEVKVGDKVLYSKYAGTDIKLGGDDYVLLTEKDIL 99 The following BLAST results are available for this feature:
BLAST of CX308516 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 131
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX308516 ID=CX308516; Name=CX308516; organism=Citrus clementina; type=EST; length=566bpback to top |