CX308516
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308516 vs. ExPASy Swiss-Prot
Match: CH10_CHLPD (10 kDa chaperonin OS=Chlorobium phaeobacteroides (strain DSM 266) GN=groS PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.495e-11 Identity = 35/92 (38.04%), Postives = 51/92 (55.43%), Query Frame = 2 Query: 293 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQ-XXXXXXXXXXXXXXXXXLDISVKPGTQVIYSKYAWTELEFNGAHHLILREDDVVGI 565 ++KPL DRV+VK EEKT GG+ +P T + KPQ L++ +K G +V+Y KY+ TE+ G +LI+RE D+ I Sbjct: 2 NLKPLADRVIVKPAPAEEKTKGGLIIPDTGKEKPQYGEVVAVGTGKVADSGQLLEMQIKVGQKVLYGKYSGTEVSVEGEDYLIMRESDIFAI 93
BLAST of CX308516 vs. ExPASy Swiss-Prot
Match: CH10_ANOFW (10 kDa chaperonin OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=groS PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.495e-11 Identity = 35/91 (38.46%), Postives = 54/91 (59.34%), Query Frame = 2 Query: 296 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQ-XXXXXXXXXXXXXXXXXLDISVKPGTQVIYSKYAWTELEFNGAHHLILREDDVVGI 565 +KPLGDR+++++ EEKT GI LP TA+ KPQ + V G ++I+SKYA TE++++G +LILRE D++ + Sbjct: 2 LKPLGDRIVIELIQTEEKTASGIVLPDTAKEKPQEGKVVAVGSGRVLDNGERVAPEVSVGDRIIFSKYAGTEVKYDGKEYLILRESDILAV 92
BLAST of CX308516 vs. ExPASy Swiss-Prot
Match: CH10_ALKMQ (10 kDa chaperonin OS=Alkaliphilus metalliredigens (strain QYMF) GN=groS PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.495e-11 Identity = 33/91 (36.26%), Postives = 55/91 (60.44%), Query Frame = 2 Query: 293 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQXXXXXXXXXXXXXXXXXLDISVKPGTQVIYSKYAWTELEFNGAHHLILREDDVVGI 565 +IKPLGD+V++K E+KT GI LP +A+ +PQ + + +K G +VI+SKYA TE++ +G + ILR++D++ + Sbjct: 2 NIKPLGDKVVIKKVEAEDKTKSGIVLPGSAKEQPQMAEVVAVGPGGVVEGKEIIMELKVGDKVIFSKYAGTEVKLDGEEYTILRQNDILAV 92
BLAST of CX308516 vs. ExPASy Swiss-Prot
Match: CH101_BRAJA (10 kDa chaperonin 1 OS=Bradyrhizobium japonicum GN=groS1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.495e-11 Identity = 36/90 (40.00%), Postives = 54/90 (60.00%), Query Frame = 2 Query: 299 KPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQXXXXXXXXXXXXXXXXXL-DISVKPGTQVIYSKYAWTELEFNGAHHLILREDDVVGI 565 +PL DRVLV+ EEKT GGI +P TA+ KPQ L I VKPG +V++ K++ TE++ +G +LI++E D++G+ Sbjct: 4 RPLHDRVLVRRIDAEEKTAGGIIIPDTAKEKPQEGEIIAAGSGGRNEQGQLIPIDVKPGDRVLFGKWSGTEVKIDGQDYLIMKESDLLGV 93
BLAST of CX308516 vs. ExPASy Swiss-Prot
Match: CH10_PROVI (10 kDa chaperonin OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=groS PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.259e-11 Identity = 35/92 (38.04%), Postives = 51/92 (55.43%), Query Frame = 2 Query: 293 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQ-XXXXXXXXXXXXXXXXXLDISVKPGTQVIYSKYAWTELEFNGAHHLILREDDVVGI 565 ++KPL DRV+VK EEKT GG+++P T + KP L++ VK G +V+Y KY+ TE+ G +LI+RE D+ I Sbjct: 2 NLKPLADRVIVKPAPAEEKTKGGLYIPDTGKEKPMYGEVVAVGAGKMSDSGQLLEMPVKAGDKVLYGKYSGTEVSVEGEDYLIMRESDIFAI 93
BLAST of CX308516 vs. ExPASy Swiss-Prot
Match: CH10_GEOSF (10 kDa chaperonin OS=Geobacter sp. (strain FRC-32) GN=groS PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.259e-11 Identity = 34/91 (37.36%), Postives = 54/91 (59.34%), Query Frame = 2 Query: 296 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQXXXXXXXXXXXXXXXXX-LDISVKPGTQVIYSKYAWTELEFNGAHHLILREDDVVGI 565 ++P+ DR++VK E KT GGI++P TA+ KPQ L + VK G +V++ KY+ TE++ G +LI+REDD++G+ Sbjct: 3 LRPMQDRIIVKRVEEETKTAGGIYIPETAKEKPQEGEVVAVGNGKRTEDGKILPLDVKVGDKVLFGKYSGTEVKVEGQDYLIMREDDILGV 93
BLAST of CX308516 vs. ExPASy Swiss-Prot
Match: CH10_LACHE (10 kDa chaperonin OS=Lactobacillus helveticus GN=groS PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.256e-11 Identity = 35/91 (38.46%), Postives = 53/91 (58.24%), Query Frame = 2 Query: 296 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKP-QXXXXXXXXXXXXXXXXXLDISVKPGTQVIYSKYAWTELEFNGAHHLILREDDVVGI 565 ++P+GDRV+VK+K EEKT GGI L S A+ KP + + +SVK G V+Y +Y+ T +E+ G +L+L E D++ I Sbjct: 2 LQPIGDRVIVKVKDEEEKTVGGIVLASNAKKKPTEGEVVAVGEGAYASNGEKIPMSVKKGDVVLYDRYSGTNVEYEGEKYLVLHEKDILAI 92
BLAST of CX308516 vs. ExPASy Swiss-Prot
Match: CH10_LACH4 (10 kDa chaperonin OS=Lactobacillus helveticus (strain DPC 4571) GN=groS PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.256e-11 Identity = 35/91 (38.46%), Postives = 53/91 (58.24%), Query Frame = 2 Query: 296 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKP-QXXXXXXXXXXXXXXXXXLDISVKPGTQVIYSKYAWTELEFNGAHHLILREDDVVGI 565 ++P+GDRV+VK+K EEKT GGI L S A+ KP + + +SVK G V+Y +Y+ T +E+ G +L+L E D++ I Sbjct: 2 LQPIGDRVIVKVKDEEEKTVGGIVLASNAKKKPTEGEVVAVGEGAYASNGEKIPMSVKKGDVVLYDRYSGTNVEYEGEKYLVLHEKDILAI 92
BLAST of CX308516 vs. ExPASy Swiss-Prot
Match: CH10_DESOH (10 kDa chaperonin OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=groS PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.256e-11 Identity = 35/90 (38.89%), Postives = 52/90 (57.78%), Query Frame = 2 Query: 299 KPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKP-QXXXXXXXXXXXXXXXXXLDISVKPGTQVIYSKYAWTELEFNGAHHLILREDDVVGI 565 +PL DR+LVK E KT GGI +P TA+ KP + + + VK G +V++ KY TE++ +G +LI+REDD++GI Sbjct: 4 RPLHDRILVKRVEEETKTKGGIIIPDTAKEKPIEGKVMAVGNGRLGEDGKLIPLEVKKGDRVLFGKYGGTEVKMDGQEYLIMREDDILGI 93
BLAST of CX308516 vs. ExPASy Swiss-Prot
Match: CH10_CHLPB (10 kDa chaperonin OS=Chlorobium phaeobacteroides (strain BS1) GN=groS PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.256e-11 Identity = 35/92 (38.04%), Postives = 51/92 (55.43%), Query Frame = 2 Query: 293 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQ-XXXXXXXXXXXXXXXXXLDISVKPGTQVIYSKYAWTELEFNGAHHLILREDDVVGI 565 ++KPL DRV+VK EEKT GG+++P T + KPQ L++ V G +V+Y KY+ TE+ G +LI+RE D+ I Sbjct: 2 NLKPLADRVIVKPAPAEEKTKGGLYIPDTGKEKPQYGEVVAVGAGKVADSGQLLEMQVAVGNKVLYGKYSGTEVAVEGEDYLIMRESDIFAI 93 The following BLAST results are available for this feature:
BLAST of CX308516 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 131
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX308516 ID=CX308516; Name=CX308516; organism=Citrus clementina; type=EST; length=566bpback to top |