CX308518
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308518 vs. ExPASy Swiss-Prot
Match: PROF1_CITSI (Profilin OS=Citrus sinensis PE=1 SV=2) HSP 1 Score: 220.32 bits (560), Expect = 6.027e-57 Identity = 101/131 (77.10%), Postives = 117/131 (89.31%), Query Frame = 3 Query: 54 MSWQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 446 MSWQAYVDDHL+C+I+GN L+AAAI+G DGSVW+QS FP + EEI I+ DF++PGTLAPTGL+LGGTKYMVIQGE GAVIRGKKG GG+ +KKT+ ALIIGIYDEP+TPGQCNMIVERLGDYLI+QGL Sbjct: 1 MSWQAYVDDHLMCDIDGNRLTAAAILGQDGSVWSQSATFPAFRLEEIAAILKDFDQPGTLAPTGLFLGGTKYMVIQGEAGAVIRGKKGSGGIIVKKTNQALIIGIYDEPLTPGQCNMIVERLGDYLIEQGL 131
BLAST of CX308518 vs. ExPASy Swiss-Prot
Match: PROF2_ARATH (Profilin-2 OS=Arabidopsis thaliana GN=PRO2 PE=1 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 7.872e-57 Identity = 102/131 (77.86%), Postives = 113/131 (86.26%), Query Frame = 3 Query: 54 MSWQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 446 MSWQ+YVDDHL+CE+EGNHL+ AAI G DGSVWAQS FPQLKP EI GI DF E G LAPTGL+LGG KYMV+QGE GAVIRGKKGPGGVTIKKT+ AL+ GIYDEPMT GQCN++VERLGDYLI+ GL Sbjct: 1 MSWQSYVDDHLMCEVEGNHLTHAAIFGQDGSVWAQSSAFPQLKPAEIAGINKDFEEAGHLAPTGLFLGGEKYMVVQGEAGAVIRGKKGPGGVTIKKTTQALVFGIYDEPMTGGQCNLVVERLGDYLIESGL 131
BLAST of CX308518 vs. ExPASy Swiss-Prot
Match: PROF4_ARATH (Profilin-4 OS=Arabidopsis thaliana GN=PRO4 PE=2 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.028e-56 Identity = 99/134 (73.88%), Postives = 119/134 (88.81%), Query Frame = 3 Query: 54 MSWQAYVDDHLLCEI---EGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 446 MSWQAYVD+HL+C++ +G+HL+AAAIIGHDGSVWAQS NFPQ KP+EIT IM DF+EPG LAPTG++L G KYMVIQGEP AVIRGKKG GG+TIKKT +++ G+Y+EP+TPGQCNM+VERLGDYLI+QGL Sbjct: 1 MSWQAYVDEHLMCDVGDGQGHHLTAAAIIGHDGSVWAQSANFPQFKPQEITDIMKDFDEPGHLAPTGMFLAGLKYMVIQGEPNAVIRGKKGAGGITIKKTGQSMVFGLYEEPVTPGQCNMVVERLGDYLIEQGL 134
BLAST of CX308518 vs. ExPASy Swiss-Prot
Match: PROF1_TOBAC (Profilin-1 OS=Nicotiana tabacum GN=PRO1 PE=2 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 1.754e-56 Identity = 101/133 (75.94%), Postives = 117/133 (87.97%), Query Frame = 3 Query: 54 MSWQAYVDDHLLCEIEG---NHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQG 443 MSWQ YVDDHL+ +IEG +HL+AAAI+GHDGSVWAQS FP+ KPEEIT IM DF+EPG LAPTGL+LGG KYMVIQGEPGAVIRGKKG GG+TIKKT+ ALI GIY+EP+TPGQCNM+VE++ DYL+DQG Sbjct: 1 MSWQTYVDDHLMADIEGQQGHHLAAAAILGHDGSVWAQSSTFPKFKPEEITNIMKDFDEPGHLAPTGLFLGGAKYMVIQGEPGAVIRGKKGSGGITIKKTNQALIFGIYEEPVTPGQCNMVVEKIRDYLVDQG 133
BLAST of CX308518 vs. ExPASy Swiss-Prot
Match: PROF_BETVE (Profilin OS=Betula verrucosa GN=BETVII PE=1 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 2.991e-56 Identity = 101/133 (75.94%), Postives = 117/133 (87.97%), Query Frame = 3 Query: 54 MSWQAYVDDHLLCEIEG--NHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 446 MSWQ YVD+HL+C+I+G ++ A+AI+GHDGSVWAQS +FPQ KP+EITGIM DF EPG LAPTGL+LGG KYMVIQGE GAVIRGKKG GG+TIKKT AL+ GIY+EP+TPGQCNM+VERLGDYLIDQGL Sbjct: 1 MSWQTYVDEHLMCDIDGQASNSLASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFEEPGHLAPTGLHLGGIKYMVIQGEAGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMVVERLGDYLIDQGL 133
BLAST of CX308518 vs. ExPASy Swiss-Prot
Match: PROF3_TOBAC (Profilin-3 OS=Nicotiana tabacum GN=PRO3 PE=2 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 8.703e-56 Identity = 99/132 (75.00%), Postives = 116/132 (87.88%), Query Frame = 3 Query: 54 MSWQAYVDDHLLCEIEGN--HLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQG 443 MSWQ YVDDHL+ + EG HL+AAAI+GHDGSVWAQS +FP+ KPEEIT IM DF+EPG LAPTGL+L G KYMVIQGEPGAVIRGKKG GG+TIKKT+ ALI G+Y+EP+TPGQCNM+VE++GDYL+DQG Sbjct: 1 MSWQTYVDDHLMVDFEGQGQHLAAAAILGHDGSVWAQSPHFPKFKPEEITNIMKDFDEPGFLAPTGLFLAGIKYMVIQGEPGAVIRGKKGSGGITIKKTNQALIFGLYEEPVTPGQCNMVVEKIGDYLVDQG 132
BLAST of CX308518 vs. ExPASy Swiss-Prot
Match: PROF3_AMBAR (Profilin-3 OS=Ambrosia artemisiifolia GN=D03 PE=1 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 5.641e-55 Identity = 95/133 (71.43%), Postives = 118/133 (88.72%), Query Frame = 3 Query: 54 MSWQAYVDDHLLCEIEG--NHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 446 MSWQAYVD+HL+C+IEG +HL++AAI+GHDG+VWAQS NFPQ KPEE+ GI+ +F++ GTLAPTG+++ G KYMV+QGE GAVIRGKKG GG+ IKKT AL++GIYDEP+ PGQCNM+VERLGDYLIDQG+ Sbjct: 1 MSWQAYVDEHLMCDIEGTGHHLTSAAILGHDGTVWAQSSNFPQFKPEEMKGIITEFDQAGTLAPTGMFIAGAKYMVLQGEQGAVIRGKKGAGGICIKKTGQALVMGIYDEPVAPGQCNMVVERLGDYLIDQGM 133
BLAST of CX308518 vs. ExPASy Swiss-Prot
Match: PROF3_ARATH (Profilin-3 OS=Arabidopsis thaliana GN=PRO3 PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.257e-54 Identity = 95/134 (70.90%), Postives = 116/134 (86.57%), Query Frame = 3 Query: 54 MSWQAYVDDHLLCEI---EGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 446 MSWQ YVD+HL+C++ +G+HL+AAAI+GHDGSVWAQS NFPQ K +E + IM DF+EPG LAPTGL++ G KYMVIQGEPGAVIRGKKG GG+TIKKT + + GIY+EP+TPGQCNM+VERLGDYL++QGL Sbjct: 1 MSWQTYVDEHLMCDVGDGQGHHLTAAAIVGHDGSVWAQSANFPQFKGQEFSDIMKDFDEPGHLAPTGLFMAGAKYMVIQGEPGAVIRGKKGAGGITIKKTGQSCVFGIYEEPVTPGQCNMVVERLGDYLLEQGL 134
BLAST of CX308518 vs. ExPASy Swiss-Prot
Match: PROF2_ARTVU (Profilin-2 OS=Artemisia vulgaris PE=1 SV=3) HSP 1 Score: 211.846 bits (538), Expect = 2.144e-54 Identity = 96/133 (72.18%), Postives = 116/133 (87.22%), Query Frame = 3 Query: 54 MSWQAYVDDHLLCEIEGN--HLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 446 MSWQ YVDDHL+C+IEG HL+AAAI+G DG+VWA+S+ FP+ KPEE+ GI+N+FNE GTLAPTGL+LGG KYMV+QGE GAVIRGKKG GG+ IKKT A+++GIYDEP+ PGQCNMIVERLGDYL+DQ + Sbjct: 1 MSWQTYVDDHLMCDIEGTGQHLTAAAILGLDGTVWAKSDKFPEFKPEEMKGIINEFNEVGTLAPTGLFLGGAKYMVLQGEAGAVIRGKKGAGGICIKKTGQAMVMGIYDEPVAPGQCNMIVERLGDYLVDQNM 133
BLAST of CX308518 vs. ExPASy Swiss-Prot
Match: PROF_BRANA (Profilin OS=Brassica napus PE=2 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 6.237e-54 Identity = 96/134 (71.64%), Postives = 113/134 (84.33%), Query Frame = 3 Query: 54 MSWQAYVDDHLLCEI---EGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 446 MSWQ YVD+HL+C++ +G+HL+AAAI GHDGSVWAQS NFPQ K +E IM DF+EPG LAPTGL+L G KYMVIQGEPGAVIRGKKG GG+TIKKT + + GIY+EP+TPGQCNM+VERLGDYLI+Q L Sbjct: 1 MSWQTYVDEHLMCDVGDGQGHHLAAAAIFGHDGSVWAQSANFPQFKGQEFANIMKDFDEPGHLAPTGLFLAGAKYMVIQGEPGAVIRGKKGAGGITIKKTGQSCVFGIYEEPVTPGQCNMVVERLGDYLIEQDL 134 The following BLAST results are available for this feature:
BLAST of CX308518 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 90
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308518 ID=CX308518; Name=CX308518; organism=Citrus clementina; type=EST; length=612bpback to top |