CX308557
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308557 vs. ExPASy Swiss-Prot
Match: ZIP7_ARATH (Zinc transporter 7 OS=Arabidopsis thaliana GN=ZIP7 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 3.771e-31 Identity = 68/132 (51.52%), Postives = 88/132 (66.67%), Query Frame = 2 Query: 2 SESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPXXXXXXXXXSSFYDENDPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQDNKRLQFGAHVSLLLGAGCMSLLAKWA 397 S++ T++ L+AAL FHQ FEGMGLGG I QA+FKS+ + FFS+TTP YDE PTALIV G+ NA +AG+LIYM+LV+LLA +F PK+Q N +L +V+ GA MSL+AKWA Sbjct: 234 SDNKCTVQSLIAALCFHQLFEGMGLGGSILQAQFKSKTNWTMVFFFSVTTPFGIVLGMAIQKIYDETSPTALIVVGVLNACSAGLLIYMALVNLLAHEFFGPKIQGNIKLHVLGYVATFTGAAGMSLMAKWA 365
BLAST of CX308557 vs. ExPASy Swiss-Prot
Match: ZIP6_ARATH (Zinc transporter 6, chloroplastic OS=Arabidopsis thaliana GN=ZIP6 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 6.657e-28 Identity = 66/139 (47.48%), Postives = 93/139 (66.91%), Query Frame = 2 Query: 2 SESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTP--XXXXXXXXXSSFYDENDPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKM-----QDNKRLQFGAHVSLLLGAGCMSLLAKWA 397 S++ TI+PL+AAL+FHQ FEG+GLGGCI QA FK+ V + L F++TTP ++ YD+ +P ALI+EG+ + ++GILIYM+LVDL+A DF + KM + RL+ V+L+LG+ MSLLA WA Sbjct: 203 SQNKCTIRPLIAALSFHQIFEGLGLGGCIAQAGFKAGTVVYMCLMFAVTTPLGIVLGMVIFAATGYDDQNPNALIMEGLLGSFSSGILIYMALVDLIALDFFHNKMLTTCGESGSRLKKLCFVALVLGSASMSLLALWA 341
BLAST of CX308557 vs. ExPASy Swiss-Prot
Match: IRT2_ARATH (Fe(2+) transport protein 2 OS=Arabidopsis thaliana GN=IRT2 PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.483e-27 Identity = 63/127 (49.61%), Postives = 81/127 (63.78%), Query Frame = 2 Query: 17 TIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPXXXXXXXXXSSFYDENDPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQDNKRLQFGAHVSLLLGAGCMSLLAKWA 397 TIK L+ AL FH FEG+GLGGCI QA F + ++A FF+ TTP SS Y +N PTALI G+ NA +AG+LIYM+LVDLLA +FM +Q + +LQ + LLG MS++A WA Sbjct: 224 TIKGLIIALCFHHLFEGIGLGGCILQADFTNVKKFLMAFFFTGTTPCGIFLGIALSSIYRDNSPTALITIGLLNACSAGMLIYMALVDLLATEFMGSMLQGSIKLQIKCFTAALLGCAVMSVVAVWA 350
BLAST of CX308557 vs. ExPASy Swiss-Prot
Match: ZRT1_YEAST (Zinc-regulated transporter 1 OS=Saccharomyces cerevisiae GN=ZRT1 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 6.463e-15 Identity = 49/128 (38.28%), Postives = 71/128 (55.47%), Query Frame = 2 Query: 29 LVAALTFHQFFEGMGLGGCITQAKF---KSRGVAILALFFSLTTPXXXXXXXXXSSFYDENDPTALIVEGIFNAAAAGILIYMSLVDLLAADFM-NP-KMQDNKRLQFGAHVSLLLGAGCMSLLAKWA 397 L L FHQ FEG+G+G ++ +F K L + + LTTP + Y TAL++ G+ +A +AGIL+Y LV+LLA DF+ NP + +D + L F + L GAG M+L+ KWA Sbjct: 250 LYPVLVFHQSFEGLGIGARLSAIEFPRSKRWWPWALCVAYGLTTPICVAIGLGVRTRYVSGSYTALVISGVLDAISAGILLYTGLVELLARDFIFNPQRTKDLRELSFNV-ICTLFGAGIMALIGKWA 376
BLAST of CX308557 vs. ExPASy Swiss-Prot
Match: ZRT2_YEAST (Zinc-regulated transporter 2 OS=Saccharomyces cerevisiae GN=ZRT2 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 6.049e-13 Identity = 45/138 (32.61%), Postives = 71/138 (51.45%), Query Frame = 2 Query: 2 SESPKTIKPLVAALTFHQFFEGMGLGGCITQAKF---KSRGVAILALFFSLTTPXXXXXXXXXSSFYDENDPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNP---KMQDNKRLQFGAHVSLLLGAGCMSLLAKWA 397 S + + + L LTFHQ FEG+GLG + + + K ++ L F+LT+P + ALI G+F++ ++GILIY LV+L+A +F+ K D + A++ + GA M+LL KWA Sbjct: 285 SVAGEEFETLFIVLTFHQMFEGLGLGTRVAETNWPESKKYMPWLMGLAFTLTSPIAVAVGIGVRHSWIPGSRRALIANGVFDSISSGILIYTGLVELMAHEFLYSNQFKGPDGLKKMLSAYLIMCCGAALMALLGKWA 422 The following BLAST results are available for this feature:
BLAST of CX308557 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308557 ID=CX308557; Name=CX308557; organism=Citrus clementina; type=EST; length=461bpback to top |