CX308600
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS15B_DROME (40S ribosomal protein S15Ab OS=Drosophila melanogaster GN=RpS15Ab PE=2 SV=3) HSP 1 Score: 141.739 bits (356), Expect = 1.089e-33 Identity = 65/83 (78.31%), Postives = 73/83 (87.95%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 GEFE V+DHRAGKIVV L GRLNKCGVISPRFD + +IE WT LLPSRQFGY+VLTTS GIMDHEEARRK++GGK+LGFF+ Sbjct: 48 GEFEIVEDHRAGKIVVNLTGRLNKCGVISPRFDAPINDIEKWTNNLLPSRQFGYVVLTTSGGIMDHEEARRKHLGGKILGFFF 130
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS22_NEUCR (40S ribosomal protein S22 OS=Neurospora crassa GN=rps-22 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.858e-33 Identity = 62/83 (74.70%), Postives = 76/83 (91.57%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 GEFE VDDHR+GKIVV+LNGR+NKCGVISPR++V + E+E W +LLP+RQFGY++LTTSAGIMDHEEARRK+V GK++GFFY Sbjct: 48 GEFEEVDDHRSGKIVVQLNGRMNKCGVISPRYNVRLAELEKWVVKLLPARQFGYVILTTSAGIMDHEEARRKHVSGKIIGFFY 130
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS15A_PONAB (40S ribosomal protein S15a OS=Pongo abelii GN=RPS15A PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.858e-33 Identity = 65/83 (78.31%), Postives = 73/83 (87.95%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 GEFE +DDHRAGKIVV L GRLNKCGVISPRFDV +K++E W L PSRQFG+IVLTTSAGIMDHEEARRK+ GGK+LGFF+ Sbjct: 48 GEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLFPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS15A_ICTPU (40S ribosomal protein S15a OS=Ictalurus punctatus GN=rps15a PE=2 SV=3) HSP 1 Score: 140.584 bits (353), Expect = 2.427e-33 Identity = 66/83 (79.52%), Postives = 73/83 (87.95%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 GEFE +DDHRAGKIVV L GRLNKCGVISPRFDV +K++E W LLPSRQFG+IVLTTSAGIMDHEEARRK+ GGK LGFF+ Sbjct: 48 GEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKSLGFFF 130
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS15A_DICDI (40S ribosomal protein S15a OS=Dictyostelium discoideum GN=rps15a PE=2 SV=3) HSP 1 Score: 132.494 bits (332), Expect = 6.610e-31 Identity = 61/83 (73.49%), Postives = 72/83 (86.75%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 GEFE VDDHR+GKIV++L GR+NKCGVISPRFDV + EIE W + LLPSRQFG+IVLTTS GIMDH EA+ ++ GGK+LGFFY Sbjct: 48 GEFEIVDDHRSGKIVIDLIGRINKCGVISPRFDVTLDEIEKWASYLLPSRQFGHIVLTTSLGIMDHNEAKTRHTGGKLLGFFY 130
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS22_SCHPO (40S ribosomal protein S22 OS=Schizosaccharomyces pombe GN=rps22a PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 3.627e-29 Identity = 58/82 (70.73%), Postives = 69/82 (84.15%), Query Frame = -3 Query: 44 EFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 289 EF +DDHR+GKIV++LNGR+NKCGVISPRF+V +K+IE W +LLPSRQ G IVLTTS GIM H EAR K+ GGK+LGFFY Sbjct: 49 EFTEIDDHRSGKIVIQLNGRINKCGVISPRFNVKLKDIEKWVNQLLPSRQVGVIVLTTSRGIMSHNEARAKDAGGKILGFFY 130
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS22_AGABI (40S ribosomal protein S22 OS=Agaricus bisporus GN=rps22 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 1.055e-28 Identity = 60/83 (72.29%), Postives = 68/83 (81.93%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 GEFE +DDHR GKI+V+LNGRLNK GVISPRF+V IE W LLPSR G IVLTTS+GI+DHEEARRKNVGGK+LG+ Y Sbjct: 48 GEFEIIDDHRGGKIIVQLNGRLNKTGVISPRFNVQHNRIEQWINYLLPSRGIGIIVLTTSSGILDHEEARRKNVGGKLLGYVY 130
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: R15A5_ARATH (40S ribosomal protein S15a-5 OS=Arabidopsis thaliana GN=RPS15AE PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 4.294e-22 Identity = 47/81 (58.02%), Postives = 62/81 (76.54%), Query Frame = -3 Query: 44 FEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 286 F+ D HR G+I V+L GR+N C ++ R DV KEIE +T R LP+RQ+GY+V+TT GI+DHEEA ++NVGG+VLGFFY Sbjct: 49 FQVYDPHRVGRITVDLQGRVNDCKALTYRQDVRAKEIEKYTERTLPTRQWGYVVITTPDGILDHEEAIKRNVGGQVLGFFY 129
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_UNCMA (30S ribosomal protein S8P OS=Uncultured methanogenic archaeon RC-I GN=rps8p PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.635e-21 Identity = 42/83 (50.60%), Postives = 62/83 (74.70%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 GEFE+VD+ +AG++ V+L G++NKCGV+ PRF VG E+E W R LP+R FG ++LTTS G+M H +A + +GG++L + Y Sbjct: 48 GEFEFVDNGKAGQLKVKLIGKINKCGVVKPRFAVGKTEMEKWEKRYLPARNFGTLILTTSKGVMSHYDAAKMGIGGEILAYVY 130
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_METPE (30S ribosomal protein S8P OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=rps8p PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 4.748e-21 Identity = 40/83 (48.19%), Postives = 60/83 (72.29%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 G F+ +DD R G+ V L+GR+NKCG I+PR+ VG+ E+E W R LP + FG ++L+TS G++ H +AR+ +GG++LGF Y Sbjct: 48 GSFDMIDDGRGGQFRVHLSGRINKCGAITPRYSVGLDELEYWETRYLPGKNFGLLILSTSRGVLTHNQARQNGIGGELLGFVY 130 The following BLAST results are available for this feature:
BLAST of CX308600 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308600 ID=CX308600; Name=CX308600; organism=Citrus clementina; type=EST; length=294bpback to top |