CX308600
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_METTP (30S ribosomal protein S8P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps8p PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.058e-20 Identity = 41/83 (49.40%), Postives = 60/83 (72.29%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 GEFE++DD ++G V+L GR+N+CGVI PRF + V E+E W R LP+R FG ++L+TS G+M H +AR + +GG +L + Y Sbjct: 47 GEFEFIDDGKSGMFKVKLLGRINRCGVIKPRFAIKVAELEKWERRFLPARNFGVLILSTSQGVMPHTDARARGIGGHLLAYVY 129
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_METLZ (30S ribosomal protein S8P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rps8p PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.058e-20 Identity = 42/81 (51.85%), Postives = 60/81 (74.07%), Query Frame = -3 Query: 44 FEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 286 FE +DD R G+ + L+G +NKCGVI+PRF V V+++E W R LP + FG I+LTTS G+M HE+AR+ VGG++LG+ + Sbjct: 50 FEKIDDGRGGQFQIALSGGINKCGVITPRFSVKVEDLESWEIRYLPGKGFGIIILTTSKGVMSHEQARKLGVGGELLGYVF 130
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_METBU (30S ribosomal protein S8P OS=Methanococcoides burtonii (strain DSM 6242) GN=rps8p PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.058e-20 Identity = 43/83 (51.81%), Postives = 58/83 (69.88%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 G+FE+V+D +AG VEL GR+NKCG I PR+ VGV E E W + LP++ FG ++LTT G++ EAR NVGG++L F Y Sbjct: 48 GDFEFVEDGKAGVYTVELIGRINKCGAIKPRYSVGVTEFERWEKQFLPAKNFGVLILTTPKGVISQYEARENNVGGQLLSFVY 130
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_HALLT (30S ribosomal protein S8P OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=rps8p PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 2.356e-20 Identity = 40/81 (49.38%), Postives = 56/81 (69.14%), Query Frame = -3 Query: 44 FEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 286 FEYVDD +AGK VEL G +N+CG + PR+ G E E W R LP+R +G +++TTS G+M H EAR + +GG+V+ + Y Sbjct: 50 FEYVDDGKAGKFEVELKGAINECGAVKPRYSAGADEFEKWEKRYLPARDYGTLIVTTSHGVMSHYEAREEGIGGQVIAYVY 130
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: R15A2_ARATH (40S ribosomal protein S15a-2 OS=Arabidopsis thaliana GN=RPS15AB PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 5.249e-20 Identity = 45/81 (55.56%), Postives = 60/81 (74.07%), Query Frame = -3 Query: 44 FEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 286 F+ D HR G+I V+L GR+N C ++ R DV EI +T R LP+RQ+GYIV+TT GI+DHEEA ++NVGG+VLGFF+ Sbjct: 49 FQVHDPHRVGRITVDLQGRVNDCKALTYRQDVKANEIGQYTERTLPTRQWGYIVITTPDGILDHEEAIKRNVGGQVLGFFH 129
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_METTH (30S ribosomal protein S8P OS=Methanobacterium thermoautotrophicum GN=rps8p PE=3 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 8.954e-20 Identity = 43/83 (51.81%), Postives = 58/83 (69.88%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 GEFEYVDD RAGK +VEL G +N CGVI PR V E E + R LP++ FG I+++T GIM H+EA+ + +GG++L + Y Sbjct: 48 GEFEYVDDGRAGKFIVELEGNINHCGVIKPRHAVKKDEFEKFEKRYLPAKNFGIIIVSTPEGIMTHKEAKDRGIGGRLLAYVY 130
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_PYRFU (30S ribosomal protein S8P OS=Pyrococcus furiosus GN=rps8p PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.995e-19 Identity = 41/83 (49.40%), Postives = 58/83 (69.88%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 GEFE++DD RAG V+L GR+NK G I PRF V V E E W R LP+ +FG ++++TS G+M H+EA K +GG+++ + Y Sbjct: 48 GEFEFIDDGRAGVYRVQLLGRINKAGAIKPRFPVKVSEFEKWEKRFLPAFEFGILIVSTSQGVMSHKEAIEKGIGGRLIAYVY 130
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_METMJ (30S ribosomal protein S8P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rps8p PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.995e-19 Identity = 37/81 (45.68%), Postives = 61/81 (75.31%), Query Frame = -3 Query: 44 FEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 286 FE++DD R G+ V+L+G +NKCG ISPRF V + ++E W ++ LP++ FG ++++TS G++ H EAR + +GG++LG+ Y Sbjct: 50 FEFIDDGRGGQFRVQLSGTINKCGAISPRFPVAMADMEYWESQYLPAKNFGILIVSTSKGVISHAEARNEGIGGQLLGYVY 130
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_METBF (30S ribosomal protein S8P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rps8p PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.995e-19 Identity = 40/83 (48.19%), Postives = 57/83 (68.67%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 GEFE++DD +AG V L GR+NKCG I PR+ VG E W + LP++ FG +++TTS+G+M EAR K +GG++L + Y Sbjct: 48 GEFEFIDDGKAGIYSVTLVGRVNKCGAIKPRYSVGTGSFERWEKQFLPAKNFGALIITTSSGVMSQYEAREKKIGGQLLAYVY 130
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_PYRAB (30S ribosomal protein S8P OS=Pyrococcus abyssi GN=rps8p PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.605e-19 Identity = 39/83 (46.99%), Postives = 59/83 (71.08%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 GEFE++DD RAG V+L G++NK G I PRF V ++ E W R LP+ +FG ++++TS G+M H+EAR K +GG+++ + Y Sbjct: 48 GEFEFIDDGRAGVYRVQLLGKINKAGAIKPRFPVKARDYERWEKRFLPAFEFGILIVSTSQGVMSHKEAREKGIGGRLIAYVY 130 The following BLAST results are available for this feature:
BLAST of CX308600 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308600 ID=CX308600; Name=CX308600; organism=Citrus clementina; type=EST; length=294bpback to top |