CX308644
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX308644 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 1.357e-22 Identity = 55/109 (50.46%), Postives = 73/109 (66.97%), Query Frame = 3 Query: 174 KRSNVVSAS--GIPEYSYKDLQKATCNF--TTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSL 488 KRS+ S G+ ++Y +L AT NF +T IGQG +G VYK + +G VA+K S QGEKEF TE+ LL RLHHRNLV+L+G+C E+G+ MLVY +M G+L Sbjct: 598 KRSSKASLKIEGVKSFTYAELALATDNFNSSTQIGQGGYGKVYKGTLGSGTVVAIKRAQEGSLQGEKEFLTEIELLSRLHHRNLVSLLGFCDEEGEQMLVYEYMENGTL 706
BLAST of CX308644 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 5.702e-21 Identity = 54/118 (45.76%), Postives = 75/118 (63.56%), Query Frame = 3 Query: 168 GFKRSNVVSASGIPE-----YSYKDLQKATCNF--TTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASH 497 G KR ++ G+ + +++++L AT NF T +G+G FG VYK ++ STG+ VAVK L + QG +EF EV++L LHH NLVNL+GYCA+ Q +LVY FM GSL H Sbjct: 54 GSKRELLLPRDGLGQIAAHTFAFRELAAATMNFHPDTFLGEGGFGRVYKGRLDSTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDH 171
BLAST of CX308644 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 7.447e-21 Identity = 50/102 (49.02%), Postives = 68/102 (66.67%), Query Frame = 3 Query: 189 VSASGIPEYSYKDLQKATCNFTTL--IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSL 488 ++ + Y++ +L AT +F+ L IG+G +G VYK + G VAVK S QG+KEF TE+ LL RLHHRNLV+L+GYC +KG+ MLVY +M GSL Sbjct: 611 MNMESVKGYNFTELDSATSSFSDLSQIGRGGYGKVYKGHLPGGLVVAVKRAEQGSLQGQKEFFTEIELLSRLHHRNLVSLLGYCDQKGEQMLVYEYMPNGSL 712
BLAST of CX308644 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.405e-19 Identity = 49/107 (45.79%), Postives = 67/107 (62.62%), Query Frame = 3 Query: 177 RSNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASH 497 R+N+ + +Y ++ T NF +IG+G FG VY ++ E VAVKVL+ S QG KEF+ EV LL R+HH NLV+LVGYC E+ L+Y +M+ G L SH Sbjct: 551 RANLSLENKKRRITYSEILLMTNNFERVIGEGGFGVVYHGYLNDSEQVAVKVLSPSSSQGYKEFKAEVELLLRVHHINLVSLVGYCDEQAHLALIYEYMANGDLKSH 657
BLAST of CX308644 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.405e-19 Identity = 45/90 (50.00%), Postives = 61/90 (67.78%), Query Frame = 3 Query: 228 LQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASH 497 L++AT NF+ +G+G+FG VY +M G+ VAVK+ A S ++F TEV LL R+HHRNLV L+GYC E + +LVY +M GSL H Sbjct: 601 LEEATDNFSKKVGRGSFGSVYYGRMKDGKEVAVKITADPSSHLNRQFVTEVALLSRIHHRNLVPLIGYCEEADRRILVYEYMHNGSLGDH 690
BLAST of CX308644 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 5.337e-19 Identity = 48/96 (50.00%), Postives = 66/96 (68.75%), Query Frame = 3 Query: 213 YSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHM-LVYVFMSKGSLASH 497 Y+Y+++ T NF +G+G FG VY ++ E VAVKVL+ S QG K+F+ EV LL R+HH NLV LVGYC ++GQH+ L+Y +MS G+L H Sbjct: 581 YTYEEVAVITNNFERPLGEGGFGVVYHGNVNDNEQVAVKVLSESSAQGYKQFKAEVDLLLRVHHINLVTLVGYC-DEGQHLVLIYEYMSNGNLKQH 675
BLAST of CX308644 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 5.337e-19 Identity = 51/122 (41.80%), Postives = 71/122 (58.20%), Query Frame = 3 Query: 153 SMWLEGFKRSNVVSASG-------IPEYSYKDLQKATCNFTTL--IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLA 491 ++W +G+ RS I +S + ++ AT NF + IG+G FGPVYK ++ G +AVK L+T SKQG +EF E+ ++ LHH NLV L G C E GQ +LVY F+ SLA Sbjct: 585 TLWKKGYLRSKSQMEKDFKSLELMIASFSLRQIKIATNNFDSANRIGEGGFGPVYKGKLFDGTIIAVKQLSTGSKQGNREFLNEIGMISALHHPNLVKLYGCCVEGGQLLLVYEFVENNSLA 706
BLAST of CX308644 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 9.104e-19 Identity = 46/95 (48.42%), Postives = 60/95 (63.16%), Query Frame = 3 Query: 213 YSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASH 497 ++Y ++ + T NF ++G+G FG VY + E VAVKVL+ S QG KEF+ EV LL R+HH NLV+LVGYC E LVY F+ G L H Sbjct: 554 FTYSEVVQVTKNFQRVLGKGGFGMVYHGTVKGSEQVAVKVLSQSSTQGSKEFKAEVDLLLRVHHTNLVSLVGYCCEGDYLALVYEFLPNGDLKQH 648
BLAST of CX308644 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 9.104e-19 Identity = 53/129 (41.09%), Postives = 74/129 (57.36%), Query Frame = 3 Query: 150 KSMWLEGFKRSNVVSASGIPEYSYKD----------------LQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSL 488 KS+ LEGF ++ ++ + I KD +++AT + TLIG+G FG VY+ + G+ VAVKV ++ S QG +EF E+ LL + H NLV L+GYC E Q +LVY FMS GSL Sbjct: 549 KSITLEGFGKTYPMATNIIFSLPSKDDFFIKSVSVKPFTLEYIEQATEQYKTLIGEGGFGSVYRGTLDDGQEVAVKVRSSTSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSL 677
BLAST of CX308644 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 9.104e-19 Identity = 45/95 (47.37%), Postives = 61/95 (64.21%), Query Frame = 3 Query: 213 YSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASH 497 ++Y ++ + T N +G+G FG VY ++ E VAVK+L+ S QG KEF+ EV LL R+HH NLVNLVGYC E+ L+Y +MS G L H Sbjct: 556 FTYSEVMEMTKNLQRPLGEGGFGVVYHGDLNGSEQVAVKLLSQTSAQGYKEFKAEVELLLRVHHINLVNLVGYCDEQDHFALIYEYMSNGDLHQH 650 The following BLAST results are available for this feature:
BLAST of CX308644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 174
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308644 ID=CX308644; Name=CX308644; organism=Citrus clementina; type=EST; length=498bpback to top |