CX308644
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX308644 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 4.838e-12 Identity = 39/97 (40.21%), Postives = 62/97 (63.92%), Query Frame = 3 Query: 213 YSYKDLQKATCNFT--TLIGQGAFGPVYKAQMSTGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLAS 494 +S ++L AT F+ ++G+G FG +YK +++ VAVK L + +K GE +FQTEV ++ HRNL+ L G+C + +LVY +M+ GS+AS Sbjct: 263 FSLRELLVATEKFSKRNVLGKGRFGILYKGRLADDTLVAVKRLNEERTKGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVAS 359
BLAST of CX308644 vs. ExPASy Swiss-Prot
Match: PTI1_SOLLC (Pto-interacting protein 1 OS=Solanum lycopersicum GN=PTI1 PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 4.838e-12 Identity = 42/131 (32.06%), Postives = 68/131 (51.91%), Query Frame = 3 Query: 108 GPESPVKSGWNGNGKSMWLEGFKRSNVVSAS--GIPEYSYKDLQKATCNFTT--LIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSL 488 GP S N G+ + + V+ +P + +L+ T NF + LIG+G++G VY + +G A+K L + SKQ ++EF +V ++ RL N+V L+GYC + G +L Y + GSL Sbjct: 19 GPFMAHNSAGNNGGQRATESAQRETQTVNIQPIAVPSIAVDELKDITDNFGSKALIGEGSYGRVYHGVLKSGRAAAIKKLDS-SKQPDREFLAQVSMVSRLKDENVVELLGYCVDGGFRVLAYEYAPNGSL 148
BLAST of CX308644 vs. ExPASy Swiss-Prot
Match: ACCR1_ARATH (Serine/threonine-protein kinase-like protein CCR1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 6.319e-12 Identity = 39/99 (39.39%), Postives = 59/99 (59.60%), Query Frame = 3 Query: 213 YSYKDLQKATCNFTTL--IGQGAFGPVYKAQMSTGETVAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASH 497 + +L+ AT F +G+G++G VYKA ++ G VAVK AT +EF+TE+ +L + H N+VNL+GY E G+ +LVY +M G+L H Sbjct: 508 FRLSELKDATNGFKEFNELGRGSYGFVYKAVLADGRQVAVKRANAATIIHTNTREFETELEILCNIRHCNIVNLLGYSTEMGERLLVYEYMPHGTLHDH 606
BLAST of CX308644 vs. ExPASy Swiss-Prot
Match: WAKLC_ARATH (Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana GN=WAKL3 PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 1.078e-11 Identity = 37/94 (39.36%), Postives = 57/94 (60.64%), Query Frame = 3 Query: 213 YSYKDLQKATCNFTT--LIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSL 488 +S ++L+KAT NF+ ++GQG G VYK + G VAVK + +EF E++LL +++HRN+V L+G C E +LVY ++ G L Sbjct: 416 FSSRELEKATDNFSIDRVLGQGGQGTVYKRMLVDGSIVAVKRSKVVDEDKMEEFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDL 509
BLAST of CX308644 vs. ExPASy Swiss-Prot
Match: WAKLP_ARATH (Wall-associated receptor kinase-like 15 OS=Arabidopsis thaliana GN=WAKL15 PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 1.408e-11 Identity = 38/106 (35.85%), Postives = 63/106 (59.43%), Query Frame = 3 Query: 189 VSASGIPE-YSYKDLQKATCNF--TTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASH 497 ++++G+ ++ K++ KAT NF + L+G G FG V+K + G TVAVK +++ + EV +L ++ H+NLV L+G C E +LVY F+ G+L H Sbjct: 333 INSTGLDRIFTGKEIVKATDNFAKSNLLGFGGFGEVFKGNLDDGTTVAVKRAKLGNEKSIYQIVNEVQILCQVSHKNLVKLLGCCIELEMPVLVYEFVPNGTLFEH 438
BLAST of CX308644 vs. ExPASy Swiss-Prot
Match: SRF3_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana GN=SRF3 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.408e-11 Identity = 40/101 (39.60%), Postives = 56/101 (55.45%), Query Frame = 3 Query: 198 SGIPEYSYKDLQKATCNFT--TLIGQGAFGPVYKAQMSTGETVAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSL 488 + + YS LQ+ T +F LIG G G VY+A++ G+ AVK L +Q + EF V + + H N+V LVGYCAE Q +LVY + S G+L Sbjct: 468 TSVKHYSIASLQQYTESFAQENLIGSGMLGSVYRARLPNGKLFAVKKLDKRASEQQQDHEFIELVNNIDMIRHSNIVELVGYCAEHDQRLLVYEYCSNGTL 568
BLAST of CX308644 vs. ExPASy Swiss-Prot
Match: IMK2_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase IMK2 OS=Arabidopsis thaliana GN=IMK2 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.408e-11 Identity = 35/85 (41.18%), Postives = 53/85 (62.35%), Query Frame = 3 Query: 243 CNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNL-VGYCAEKGQHMLVYVFMSKGSLAS 494 C ++G+ +G YKA + G VAVK L + +G KEF+ EV LG++ H+NL+ L Y KG+ +LV+ +MSKGSL++ Sbjct: 537 CATAEIMGKSTYGTAYKATLEDGNEVAVKRLREKTTKGVKEFEGEVTALGKIRHQNLLALRAYYLGPKGEKLLVFDYMSKGSLSA 621
BLAST of CX308644 vs. ExPASy Swiss-Prot
Match: Y1839_ARATH (Probable serine/threonine-protein kinase At1g18390 OS=Arabidopsis thaliana GN=At1g18390 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 1.839e-11 Identity = 40/103 (38.83%), Postives = 64/103 (62.14%), Query Frame = 3 Query: 201 GIPEYSYKDLQKATCNF--TTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--MLVYVFMSKGSLASH 497 G+ +SY++L++AT NF + +G G FG VY ++ G +VAVK L ++ + ++F+ EV +L L H NLV L G C+ K +LVY +++ G+LA H Sbjct: 328 GVHIFSYEELEEATNNFDPSKELGDGGFGTVYYGKLKDGRSVAVKRLYDNNFKRAEQFRNEVEILTGLRHPNLVALFG-CSSKQSRDLLLVYEYVANGTLADH 429
BLAST of CX308644 vs. ExPASy Swiss-Prot
Match: WAKLF_ARATH (Wall-associated receptor kinase-like 6 OS=Arabidopsis thaliana GN=WAKL6 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.839e-11 Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = 3 Query: 213 YSYKDLQKATCNFTT--LIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSL 488 +S K+L+KAT NF+ ++GQG G VYK ++ G VAVK + +EF EV+LL +++HRN+V L+G C +LVY ++ G L Sbjct: 420 FSSKELKKATDNFSMNRVLGQGGQGTVYKGMLAEGRIVAVKRSKVVGEGKMEEFINEVVLLSQINHRNIVKLLGCCLGTEVPVLVYEYIPNGDL 513
BLAST of CX308644 vs. ExPASy Swiss-Prot
Match: WAKLB_ARATH (Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.839e-11 Identity = 38/94 (40.43%), Postives = 55/94 (58.51%), Query Frame = 3 Query: 213 YSYKDLQKATCNFTT--LIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSL 488 +S +L+KAT NF ++GQG G VYK + G VAVK + +EF EV++L +++HRN+V L+G C E +LVY F+ G L Sbjct: 404 FSSHELEKATDNFNKNRVLGQGGQGTVYKGMLVDGRIVAVKRSKAVDEDRVEEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDL 497 The following BLAST results are available for this feature:
BLAST of CX308644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 174
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308644 ID=CX308644; Name=CX308644; organism=Citrus clementina; type=EST; length=498bpback to top |