CX308743
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308743 vs. ExPASy Swiss-Prot
Match: TRXB_COXBU (Thioredoxin reductase OS=Coxiella burnetii GN=trxB PE=3 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 8.619e-15 Identity = 46/123 (37.40%), Postives = 64/123 (52.03%), Query Frame = 1 Query: 4 SKVYIIHRRDSFRASKIMQNRALTNP---KIDVIWNSVVLEAYGEXXXXXXXXXXXXXXXTGQVSDLKVSGLFFAIGHEPATKFLDGQLDLHSDGYIITKPG----TTHTSVPGVFAAGDVQD 351 S V +IHRRD RA K++ + + K+ ++W+ V+ E G+ Q DL + GLF AIGH+P TK QL++ GY+ K G T T++PGVFAAGDV D Sbjct: 170 SHVTLIHRRDKLRAEKMLSAQLIKKVEEGKVAIVWSHVIEEVLGDDQGVTGVHLKHVKEEKTQ--DLTIDGLFIAIGHDPNTKIFKEQLEMDEAGYLRAKSGLQGNATATNIPGVFAAGDVTD 290
BLAST of CX308743 vs. ExPASy Swiss-Prot
Match: TRXB_BACSU (Thioredoxin reductase OS=Bacillus subtilis GN=trxB PE=1 SV=3) HSP 1 Score: 77.411 bits (189), Expect = 2.508e-14 Identity = 45/117 (38.46%), Postives = 61/117 (52.14%), Query Frame = 1 Query: 4 SKVYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEXXXXXXXXXXXXXXXTGQVSDLKVSGLFFAIGHEPATKFLDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDK 354 SKV I+HRRD RA I+Q RA N K+D +WN V E + E TG+ S+ K G+F IG P +K + + +GYI T T V G+FAAGD+++K Sbjct: 169 SKVTIVHRRDKLRAQSILQARAFDNEKVDFLWNKTVKEIHEE--NGKVGNVTLVDTVTGEESEFKTDGVFIYIGMLPLSKPFENLGITNEEGYIETN-DRMETKVEGIFAAGDIREK 282
BLAST of CX308743 vs. ExPASy Swiss-Prot
Match: TRXB_ECOLI (Thioredoxin reductase OS=Escherichia coli (strain K12) GN=trxB PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 3.275e-14 Identity = 50/123 (40.65%), Postives = 66/123 (53.66%), Query Frame = 1 Query: 4 SKVYIIHRRDSFRASKIMQNRALT---NPKIDVIWNSVVLEAYGEXXXXXXXXXXXXXXXTGQVSDLKVSGLFFAIGHEPATKFLDGQLDLHSDGYIITKPG----TTHTSVPGVFAAGDVQD 351 S+V++IHRRD FRA KI+ R + N I + N + E G+ + + L V+GLF AIGH P T +GQL+L +GYI + G T TS+PGVFAAGDV D Sbjct: 170 SEVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQN-SDNIESLDVAGLFVAIGHSPNTAIFEGQLEL-ENGYIKVQSGIHGNATQTSIPGVFAAGDVMD 290
BLAST of CX308743 vs. ExPASy Swiss-Prot
Match: TRXB_ECO57 (Thioredoxin reductase OS=Escherichia coli O157:H7 GN=trxB PE=3 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 3.275e-14 Identity = 50/123 (40.65%), Postives = 66/123 (53.66%), Query Frame = 1 Query: 4 SKVYIIHRRDSFRASKIMQNRALT---NPKIDVIWNSVVLEAYGEXXXXXXXXXXXXXXXTGQVSDLKVSGLFFAIGHEPATKFLDGQLDLHSDGYIITKPG----TTHTSVPGVFAAGDVQD 351 S+V++IHRRD FRA KI+ R + N I + N + E G+ + + L V+GLF AIGH P T +GQL+L +GYI + G T TS+PGVFAAGDV D Sbjct: 170 SEVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQN-SDNIESLDVAGLFVAIGHSPNTAIFEGQLEL-ENGYIKVQSGIHGNATQTSIPGVFAAGDVMD 290
BLAST of CX308743 vs. ExPASy Swiss-Prot
Match: TRXB_BORBU (Thioredoxin reductase OS=Borrelia burgdorferi GN=trxB PE=3 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 9.529e-14 Identity = 42/116 (36.21%), Postives = 68/116 (58.62%), Query Frame = 1 Query: 7 KVYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEXXXXXXXXXXXXXXXTGQVSDLKVSGLFFAIGHEPATKFLDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDK 354 KVY+I R+++ RA ++++ P I++++NS +E G+ V +L+VS +F A+G++P T+FL G LDL +G+I+TK TSV GVF+ GDV +K Sbjct: 191 KVYLIVRKNNLRAIAMLRDSVAKLPNIEILYNSEAIEVDGKSSVSSVKIFNKKDNV---VYELEVSAVFMAVGYKPNTEFLKGFLDLDEEGFIVTK-DVVKTSVDGVFSCGDVSNK 302
BLAST of CX308743 vs. ExPASy Swiss-Prot
Match: TRXB_LISMO (Thioredoxin reductase OS=Listeria monocytogenes GN=trxB PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.245e-13 Identity = 45/116 (38.79%), Postives = 61/116 (52.59%), Query Frame = 1 Query: 7 KVYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEXXXXXXXXXXXXXXXTGQVSDLKVSGLFFAIGHEPATKFLDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDK 354 KV I+HRRD RA +I+Q+RA + K+D IWNS V E G+ G S + V G+F +G P TK +GYI+T T++PG+FAAGDV+ K Sbjct: 171 KVTIVHRRDKLRAQQILQDRAFKDEKVDFIWNSTVEEIVGD--GKKVTGAKLVSTVDGSESIMPVDGVFIYVGLVPLTKAFLNLGITDDEGYIVTDE-EMRTNLPGIFAAGDVRAK 283
BLAST of CX308743 vs. ExPASy Swiss-Prot
Match: TRXB_EUBAC (Thioredoxin reductase OS=Eubacterium acidaminophilum GN=trxB PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.245e-13 Identity = 45/122 (36.89%), Postives = 65/122 (53.28%), Query Frame = 1 Query: 7 KVYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEXXXXXXXXXXXXXXXTGQVSDLKVS------GLFFAIGHEPATKFLDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDK 354 KV I+HRRD RA+K +Q +A NPK+D +WNS + E G+ TG+ ++ + G+F IG+ P + G++ L GYIIT T+V GVFAAGD++ K Sbjct: 169 KVTIVHRRDELRAAKSIQEKAFKNPKLDFMWNSAIEEIKGD---GIVESAVFKNLVTGETTEYFANEEDGTFGIFVFIGYIPKSDVFKGKITLDDAGYIIT-DDNMKTNVEGVFAAGDIRVK 286
BLAST of CX308743 vs. ExPASy Swiss-Prot
Match: TRXB_STAAW (Thioredoxin reductase OS=Staphylococcus aureus (strain MW2) GN=trxB PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.772e-13 Identity = 52/118 (44.07%), Postives = 66/118 (55.93%), Query Frame = 1 Query: 7 KVYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEXXXXXXXXXXXXXXXTGQVSDLKVSGLFFAIGHEPAT-KFLDGQLDLHSD-GYIITKPGTTHTSVPGVFAAGDVQDK 354 KV I+HRRD RA +I+Q+RA N KID IW S L++ E G + G+F IG +P T F D L + +D GYI+TK T TSVPG+FAAGDV+DK Sbjct: 169 KVTIVHRRDELRAQRILQDRAFKNDKIDFIW-SHTLKSINE-KDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKD--LGITNDVGYIVTKDDMT-TSVPGIFAAGDVRDK 281
BLAST of CX308743 vs. ExPASy Swiss-Prot
Match: TRXB_STAAS (Thioredoxin reductase OS=Staphylococcus aureus (strain MSSA476) GN=trxB PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.772e-13 Identity = 52/118 (44.07%), Postives = 66/118 (55.93%), Query Frame = 1 Query: 7 KVYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEXXXXXXXXXXXXXXXTGQVSDLKVSGLFFAIGHEPAT-KFLDGQLDLHSD-GYIITKPGTTHTSVPGVFAAGDVQDK 354 KV I+HRRD RA +I+Q+RA N KID IW S L++ E G + G+F IG +P T F D L + +D GYI+TK T TSVPG+FAAGDV+DK Sbjct: 169 KVTIVHRRDELRAQRILQDRAFKNDKIDFIW-SHTLKSINE-KDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKD--LGITNDVGYIVTKDDMT-TSVPGIFAAGDVRDK 281
BLAST of CX308743 vs. ExPASy Swiss-Prot
Match: TRXB_STAAN (Thioredoxin reductase OS=Staphylococcus aureus (strain N315) GN=trxB PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.772e-13 Identity = 52/118 (44.07%), Postives = 66/118 (55.93%), Query Frame = 1 Query: 7 KVYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEXXXXXXXXXXXXXXXTGQVSDLKVSGLFFAIGHEPAT-KFLDGQLDLHSD-GYIITKPGTTHTSVPGVFAAGDVQDK 354 KV I+HRRD RA +I+Q+RA N KID IW S L++ E G + G+F IG +P T F D L + +D GYI+TK T TSVPG+FAAGDV+DK Sbjct: 169 KVTIVHRRDELRAQRILQDRAFKNDKIDFIW-SHTLKSINE-KDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKD--LGITNDVGYIVTKDDMT-TSVPGIFAAGDVRDK 281 The following BLAST results are available for this feature:
BLAST of CX308743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308743 ID=CX308743; Name=CX308743; organism=Citrus clementina; type=EST; length=355bpback to top |