CX308748
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX308748 vs. ExPASy Swiss-Prot
Match: UAP56_MACMU (Spliceosome RNA helicase BAT1 OS=Macaca mulatta GN=BAT1 PE=3 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 4.571e-57 Identity = 110/160 (68.75%), Postives = 131/160 (81.88%), Query Frame = 3 Query: 3 HYIKLSELEKNRKLNDLLDALDFNQVVIFVKSASRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 482 +Y+KL + EKNRKL DLLD L+FNQVVIFVKS R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNI NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN VQ RFEV+I ELP++ID S+Y+ Sbjct: 265 YYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSYI 424
BLAST of CX308748 vs. ExPASy Swiss-Prot
Match: UAP56_HUMAN (Spliceosome RNA helicase BAT1 OS=Homo sapiens GN=BAT1 PE=1 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 4.571e-57 Identity = 110/160 (68.75%), Postives = 131/160 (81.88%), Query Frame = 3 Query: 3 HYIKLSELEKNRKLNDLLDALDFNQVVIFVKSASRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 482 +Y+KL + EKNRKL DLLD L+FNQVVIFVKS R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNI NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN VQ RFEV+I ELP++ID S+Y+ Sbjct: 265 YYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSYI 424
BLAST of CX308748 vs. ExPASy Swiss-Prot
Match: UAP56_CHICK (Spliceosome RNA helicase BAT1 OS=Gallus gallus GN=BAT1 PE=2 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 4.571e-57 Identity = 110/160 (68.75%), Postives = 131/160 (81.88%), Query Frame = 3 Query: 3 HYIKLSELEKNRKLNDLLDALDFNQVVIFVKSASRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 482 +Y+KL + EKNRKL DLLD L+FNQVVIFVKS R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNI NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN VQ RFEV+I ELP++ID S+Y+ Sbjct: 265 YYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSYI 424
BLAST of CX308748 vs. ExPASy Swiss-Prot
Match: UAP56_CANFA (Spliceosome RNA helicase BAT1 OS=Canis familiaris GN=BAT1 PE=3 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 4.571e-57 Identity = 110/160 (68.75%), Postives = 131/160 (81.88%), Query Frame = 3 Query: 3 HYIKLSELEKNRKLNDLLDALDFNQVVIFVKSASRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 482 +Y+KL + EKNRKL DLLD L+FNQVVIFVKS R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNI NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN VQ RFEV+I ELP++ID S+Y+ Sbjct: 265 YYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSYI 424
BLAST of CX308748 vs. ExPASy Swiss-Prot
Match: UAP56_BOVIN (Spliceosome RNA helicase BAT1 OS=Bos taurus GN=BAT1 PE=2 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 4.571e-57 Identity = 110/160 (68.75%), Postives = 131/160 (81.88%), Query Frame = 3 Query: 3 HYIKLSELEKNRKLNDLLDALDFNQVVIFVKSASRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 482 +Y+KL + EKNRKL DLLD L+FNQVVIFVKS R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNI NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN VQ RFEV+I ELP++ID S+Y+ Sbjct: 265 YYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSYI 424
BLAST of CX308748 vs. ExPASy Swiss-Prot
Match: SUB2_SCLS1 (ATP-dependent RNA helicase sub2 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=sub2 PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.508e-55 Identity = 103/160 (64.38%), Postives = 130/160 (81.25%), Query Frame = 3 Query: 3 HYIKLSELEKNRKLNDLLDALDFNQVVIFVKSASRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPE-QIDTSTY 479 +YIKL E EKNR+LN+LLD L FNQV+IFVKS RA EL+KLL ECNFPS+ IHSG+SQEER+ R+ FK+ NKRI VATD+ GRGID+ ++N+ INYD+P AD+YLHRVGRAGRFGTKGLAI+FVS+ +D ++L V+ RFEV + E PE +D++ Y Sbjct: 281 YYIKLEEREKNRRLNELLDELSFNQVIIFVKSTVRATELDKLLRECNFPSVAIHSGVSQEERIKRFNDFKDFNKRICVATDVFGRGIDVNKINLAINYDLPPDADSYLHRVGRAGRFGTKGLAISFVSNEADQEVLKAVEKRFEVALPEYPEGGVDSAAY 440
BLAST of CX308748 vs. ExPASy Swiss-Prot
Match: SUB2_PHANO (ATP-dependent RNA helicase SUB2 OS=Phaeosphaeria nodorum GN=SUB2 PE=3 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 4.278e-55 Identity = 103/160 (64.38%), Postives = 125/160 (78.12%), Query Frame = 3 Query: 6 YIKLSELEKNRKLNDLLDALDFNQVVIFVKSASRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQ-IDTSTYM 482 Y+KL E EKNRKLNDLLD L+FNQV+IFV+S R EL+KLL ECNFPS +HSG+ QEER+ RYK FKE RI V+TD+ GRGID+ER+N+ INYDMPD AD YLHRVGRAGRFGTKGL+I+FVSS D +L ++ RF +I E PE I +++YM Sbjct: 277 YVKLDEREKNRKLNDLLDNLEFNQVIIFVRSTLRCTELDKLLRECNFPSTAVHSGIGQEERIKRYKEFKEFQTRICVSTDIFGRGIDVERINVAINYDMPDKADAYLHRVGRAGRFGTKGLSISFVSSQDDEAVLKAIEERFAAEIPEFPEDGISSASYM 436
BLAST of CX308748 vs. ExPASy Swiss-Prot
Match: SUB2_EMENI (ATP-dependent RNA helicase sub2 OS=Emericella nidulans GN=sub2 PE=3 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 9.530e-55 Identity = 107/161 (66.46%), Postives = 129/161 (80.12%), Query Frame = 3 Query: 3 HYIKLSELEKNRKLNDLLDALDFNQVVIFVKSASRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQ-IDTSTYM 482 +YIKLSE EKNRKLN+LLD+L+FNQV+IFVKS RA EL+KLL ECNFPSI +HSG RYK FKE NKRI VATD+ GRGIDIER+N+ INYD+P AD+YLHRVGRAGRFGTKGL+I+FVS+ D +L ++ RFEV + E PE+ +D+STYM Sbjct: 298 YYIKLSEAEKNRKLNELLDSLEFNQVIIFVKSTIRANELDKLLRECNFPSIAVHSG--------RYKEFKEFNKRICVATDVFGRGIDIERINLAINYDLPADADSYLHRVGRAGRFGTKGLSISFVSTPEDEQVLKDIEKRFEVALPEYPEEGVDSSTYM 450
BLAST of CX308748 vs. ExPASy Swiss-Prot
Match: SUB22_VANPO (ATP-dependent RNA helicase SUB2-2 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=SUB2-2 PE=3 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 1.054e-53 Identity = 105/161 (65.22%), Postives = 124/161 (77.02%), Query Frame = 3 Query: 3 HYIKLSELEKNRKLNDLLDALDFNQVVIFVKSASRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQ-IDTSTYM 482 +YIKL E EKNRKL LLD L+FNQV+IFVKS RA EL KLL E NFP+I +H M Q ER+ RYK FKE KRI V+TD+ GRGIDIER+N+ INYD+ AD YLHRVGRAGRFGTKGLAI+FVSS D ++L ++Q RF+V I E PE+ ID STY+ Sbjct: 280 YYIKLQENEKNRKLAQLLDDLEFNQVIIFVKSTKRANELTKLLNESNFPAITVHGNMKQAERIARYKAFKEFEKRICVSTDVFGRGIDIERINLAINYDLTTEADQYLHRVGRAGRFGTKGLAISFVSSPEDEEVLGKIQERFDVKIAEFPEEGIDPSTYL 440
BLAST of CX308748 vs. ExPASy Swiss-Prot
Match: SUB2_KLULA (ATP-dependent RNA helicase SUB2 OS=Kluyveromyces lactis GN=SUB2 PE=3 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.376e-53 Identity = 104/161 (64.60%), Postives = 125/161 (77.64%), Query Frame = 3 Query: 3 HYIKLSELEKNRKLNDLLDALDFNQVVIFVKSASRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQ-IDTSTYM 482 +YIKL+E EKNRKL LLD L+FNQV+IFVKS RA EL KLL NFP+I +H M QEER+ RYK FKE KRI V+TD+ GRGIDIER+N+ INYDMP+ AD YLHRVGRAGRFGTKGLAI+ +SS D +L ++Q RF+V I E PE+ +D STY+ Sbjct: 275 YYIKLNEKEKNRKLAQLLDDLEFNQVIIFVKSTVRANELTKLLNASNFPAITVHGHMKQEERIARYKAFKEFEKRICVSTDVFGRGIDIERINLAINYDMPNEADQYLHRVGRAGRFGTKGLAISMISSEDDEQVLAKIQERFDVKITEFPEEGVDPSTYL 435 The following BLAST results are available for this feature:
BLAST of CX308748 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308748 ID=CX308748; Name=CX308748; organism=Citrus clementina; type=EST; length=702bpback to top |