CX308756
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UB2E1_MOUSE (Ubiquitin-conjugating enzyme E2 E1 OS=Mus musculus GN=Ube2e1 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.156e-14 Identity = 37/82 (45.12%), Postives = 50/82 (60.98%), Query Frame = -1 Query: 6 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENK 251 F L + FT +YP KPP V F +R++H NI + G ICLDIL++ WSP ++ +L SI SLL D NP P A + N+ Sbjct: 96 FFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNR 177
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UB2E1_HUMAN (Ubiquitin-conjugating enzyme E2 E1 OS=Homo sapiens GN=UBE2E1 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.156e-14 Identity = 37/82 (45.12%), Postives = 50/82 (60.98%), Query Frame = -1 Query: 6 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENK 251 F L + FT +YP KPP V F +R++H NI + G ICLDIL++ WSP ++ +L SI SLL D NP P A + N+ Sbjct: 96 FFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNR 177
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBC_ASFK5 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Pig/Kenya/KEN-50/1950) GN=UBC PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.346e-14 Identity = 35/86 (40.70%), Postives = 50/86 (58.14%), Query Frame = -1 Query: 18 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ--------WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLF 251 FK + F +YP +PP + F S M+HPNIY DG +C+ IL WSP + +L S+ SL +PN +SPAN +AA+ + Sbjct: 50 FKAKITFPPNYPYEPPKLTFTSEMWHPNIYPDGRLCISILHTDNVEERGMTWSPAQKIETVLLSVISLFNEPNTDSPANVDAAKSY 135
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBCD2_DROME (Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophila melanogaster GN=UbcD2 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.346e-14 Identity = 36/82 (43.90%), Postives = 51/82 (62.20%), Query Frame = -1 Query: 6 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENK 251 F L + F+ +YP KPP V F +R++H NI + G ICLDIL++ WSP ++ +L SI SLL D NP P A + +N+ Sbjct: 135 FFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLQNR 216
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBC1_YEAST (Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae GN=UBC1 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.346e-14 Identity = 33/83 (39.76%), Postives = 57/83 (68.67%), Query Frame = -1 Query: 6 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENK 251 F + ++ +YP KPP ++F ++++HPNI + G+ICLDIL+N WSP+ + + L S+Q+LL P PN P ++E A+ + ++ Sbjct: 52 FVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGAICLDILKNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDR 134
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UB2R1_MOUSE (Ubiquitin-conjugating enzyme E2 R1 OS=Mus musculus GN=Cdc34 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.346e-14 Identity = 38/95 (40.00%), Postives = 55/95 (57.89%), Query Frame = -1 Query: 6 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENK 251 FK L+F DYP PP RF+++M+HPNIY G +C+ IL +W+P +V IL S+ SLL +PN SPAN +A+ ++ + K Sbjct: 58 FKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWK 152
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UB2R1_HUMAN (Ubiquitin-conjugating enzyme E2 R1 OS=Homo sapiens GN=CDC34 PE=1 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 9.346e-14 Identity = 38/95 (40.00%), Postives = 55/95 (57.89%), Query Frame = -1 Query: 6 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENK 251 FK L+F DYP PP RF+++M+HPNIY G +C+ IL +W+P +V IL S+ SLL +PN SPAN +A+ ++ + K Sbjct: 58 FKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWK 152
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBCX_DICDI (Ubiquitin-conjugating enzyme E2 pex4 OS=Dictyostelium discoideum GN=pex4 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.221e-13 Identity = 34/78 (43.59%), Postives = 52/78 (66.67%), Query Frame = -1 Query: 21 FKLTLQFTEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARL 251 F+L + +YP +PPT++FV+++FHPNI + G ICLD+L+ WS IY + ++ SI +LL P +SP N +A L Sbjct: 50 FELDISVPTNYPLQPPTIKFVTKIFHPNIHFKTGEICLDLLKTSWSAIYTLQSVCRSIIALLSLPEADSPLNCDAGNL 127
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBE2S_HUMAN (Ubiquitin-conjugating enzyme E2 S OS=Homo sapiens GN=UBE2S PE=1 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 1.594e-13 Identity = 32/81 (39.51%), Postives = 51/81 (62.96%), Query Frame = -1 Query: 9 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSEN 251 F++ L +D+P PP F++++FHPN+ A+G IC+++L+ W+ + +L +I+ LL PNP S N EA RL EN Sbjct: 60 FRMKLLLGKDFPASPPKGYFLTKIFHPNVGANGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLEN 140
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBE2S_BOVIN (Ubiquitin-conjugating enzyme E2 S OS=Bos taurus GN=UBE2S PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.594e-13 Identity = 32/81 (39.51%), Postives = 51/81 (62.96%), Query Frame = -1 Query: 9 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSEN 251 F++ L +D+P PP F++++FHPN+ A+G IC+++L+ W+ + +L +I+ LL PNP S N EA RL EN Sbjct: 60 FRMKLLLGKDFPASPPKGYFLTKIFHPNVGANGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLEN 140 The following BLAST results are available for this feature:
BLAST of CX308756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 215
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308756 ID=CX308756; Name=CX308756; organism=Citrus clementina; type=EST; length=251bpback to top |