CX308756
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBC6_ARATH (Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana GN=UBC6 PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 4.639e-13 Identity = 32/84 (38.10%), Postives = 55/84 (65.48%), Query Frame = -1 Query: 6 FKLTLQFTEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILTS-IQSLLCDPNPNSPANSEAARLFSENK 251 +K+ ++ E YP K P+V FV++++HPN+ + G++CLD++ WSP++D+ + S + LL PNP+ P N EAA L ++ Sbjct: 49 WKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLPQLLLYPNPSDPFNGEAASLLMRDR 132
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBE2S_RAT (Ubiquitin-conjugating enzyme E2 S OS=Rattus norvegicus GN=Ube2s PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.058e-13 Identity = 31/81 (38.27%), Postives = 50/81 (61.73%), Query Frame = -1 Query: 9 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSEN 251 F++ L +D+P PP F++++FHPN+ +G IC+++L+ W+ + +L +I+ LL PNP S N EA RL EN Sbjct: 60 FRMKLLLGKDFPASPPKGYFLTKIFHPNVGPNGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLEN 140
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBE2S_RANCA (Ubiquitin-conjugating enzyme E2 S OS=Rana catesbeiana GN=ube2s PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.058e-13 Identity = 31/81 (38.27%), Postives = 50/81 (61.73%), Query Frame = -1 Query: 9 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSEN 251 F++ L +D+P PP F++++FHPN+ ++G IC+++L+ W + +L +I+ LL PNP S N EA RL EN Sbjct: 60 FRMKLILGKDFPAAPPKGYFLTKIFHPNVSSNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLEN 140
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBE2S_MOUSE (Ubiquitin-conjugating enzyme E2 S OS=Mus musculus GN=Ube2s PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.058e-13 Identity = 31/81 (38.27%), Postives = 50/81 (61.73%), Query Frame = -1 Query: 9 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSEN 251 F++ L +D+P PP F++++FHPN+ +G IC+++L+ W+ + +L +I+ LL PNP S N EA RL EN Sbjct: 60 FRMKLLLGKDFPASPPKGYFLTKIFHPNVGPNGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLEN 140
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBE2S_DROSI (Ubiquitin-conjugating enzyme E2 S OS=Drosophila simulans GN=GD17343 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.058e-13 Identity = 31/80 (38.75%), Postives = 49/80 (61.25%), Query Frame = -1 Query: 12 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSE 251 F++ L +D+P PP F++++FHPN+ A+G IC++ L+ W P + IL +I+ LL PNP S N EA ++ E Sbjct: 63 FRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLE 142
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBE2S_DROSE (Ubiquitin-conjugating enzyme E2 S OS=Drosophila sechellia GN=GM13299 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.058e-13 Identity = 31/80 (38.75%), Postives = 49/80 (61.25%), Query Frame = -1 Query: 12 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSE 251 F++ L +D+P PP F++++FHPN+ A+G IC++ L+ W P + IL +I+ LL PNP S N EA ++ E Sbjct: 63 FRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLE 142
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBE2S_DROPS (Ubiquitin-conjugating enzyme E2 S OS=Drosophila pseudoobscura pseudoobscura GN=GA22810 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.058e-13 Identity = 30/80 (37.50%), Postives = 49/80 (61.25%), Query Frame = -1 Query: 12 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSE 251 F++ L ++D+P PP F++++FHPN+ +G IC++ L+ W P + IL +I+ LL PNP S N EA ++ E Sbjct: 63 FRVKLTLSKDFPQTPPKAYFLTKIFHPNVAGNGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLE 142
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBE2S_DROPE (Ubiquitin-conjugating enzyme E2 S OS=Drosophila persimilis GN=GL16001 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.058e-13 Identity = 30/80 (37.50%), Postives = 49/80 (61.25%), Query Frame = -1 Query: 12 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSE 251 F++ L ++D+P PP F++++FHPN+ +G IC++ L+ W P + IL +I+ LL PNP S N EA ++ E Sbjct: 63 FRVKLTLSKDFPQTPPKAYFLTKIFHPNVAGNGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLE 142
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBE2S_DROME (Ubiquitin-conjugating enzyme E2 S OS=Drosophila melanogaster GN=CG8188 PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 6.058e-13 Identity = 31/80 (38.75%), Postives = 49/80 (61.25%), Query Frame = -1 Query: 12 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSE 251 F++ L +D+P PP F++++FHPN+ A+G IC++ L+ W P + IL +I+ LL PNP S N EA ++ E Sbjct: 63 FRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLE 142
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBC5_ARATH (Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana GN=UBC5 PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 6.058e-13 Identity = 31/84 (36.90%), Postives = 54/84 (64.29%), Query Frame = -1 Query: 6 FKLTLQFTEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAIL-TSIQSLLCDPNPNSPANSEAARLFSENK 251 +K+ ++ + YP K P+V F+++++HPN+ GS+CLD++ WSP++D+ + T + LL PNP+ P N EAA L ++ Sbjct: 49 WKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDR 132 The following BLAST results are available for this feature:
BLAST of CX308756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 215
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308756 ID=CX308756; Name=CX308756; organism=Citrus clementina; type=EST; length=251bpback to top |