CX308756
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBC4_ARATH (Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana GN=UBC4 PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 6.058e-13 Identity = 31/84 (36.90%), Postives = 54/84 (64.29%), Query Frame = -1 Query: 6 FKLTLQFTEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAIL-TSIQSLLCDPNPNSPANSEAARLFSENK 251 +K+ ++ + YP K P+V F+++++HPN+ GS+CLD++ WSP++D+ + T + LL PNP+ P N EAA L ++ Sbjct: 49 WKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDR 132
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBC12_YARLI (NEDD8-conjugating enzyme UBC12 OS=Yarrowia lipolytica GN=UBC12 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.058e-13 Identity = 26/82 (31.71%), Postives = 52/82 (63.41%), Query Frame = -1 Query: 6 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENK 251 F+ + ++P++PP V+ + +++HPNI +G++CL+IL+ W P+ + A++ +Q L +PN + P N +AA + N+ Sbjct: 71 FRFSFYVNPNFPHEPPKVKCLQKVYHPNIDLEGNVCLNILREDWKPVLSLNAVMIGLQYLFLEPNASDPLNKDAAHQMTANR 152
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UB2SA_XENLA (Ubiquitin-conjugating enzyme E2 S-A OS=Xenopus laevis GN=ube2s-A PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.058e-13 Identity = 31/81 (38.27%), Postives = 50/81 (61.73%), Query Frame = -1 Query: 9 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSEN 251 F++ L +D+P PP F++++FHPN+ +G IC+++L+ W+ + +L +I+ LL PNP S N EA RL EN Sbjct: 60 FRMKLLLGKDFPASPPKGYFLTKIFHPNVGPNGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLEN 140
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBE2S_XENTR (Ubiquitin-conjugating enzyme E2 S OS=Xenopus tropicalis GN=ube2s PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 7.912e-13 Identity = 31/81 (38.27%), Postives = 49/81 (60.49%), Query Frame = -1 Query: 9 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSEN 251 F++ L +D+P PP F++++FHPN+ +G IC+++L+ W + +L +I+ LL PNP S N EA RL EN Sbjct: 60 FRMKLILGKDFPAAPPKGYFLTKIFHPNVSTNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLEN 140
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBC9_CAEEL (SUMO-conjugating enzyme UBC9 OS=Caenorhabditis elegans GN=ubc-9 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 7.912e-13 Identity = 29/84 (34.52%), Postives = 50/84 (59.52%), Query Frame = -1 Query: 6 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL--QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENK 251 +++ + F +D+P+ PP +F +FHPN+Y G++CL +L W P + +L IQ LL PN PA +EA +++ +N+ Sbjct: 58 YRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNR 141
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBC12_ASHGO (NEDD8-conjugating enzyme UBC12 OS=Ashbya gossypii GN=UBC12 PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 7.912e-13 Identity = 28/75 (37.33%), Postives = 50/75 (66.67%), Query Frame = -1 Query: 27 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAA 251 F+ ++ F + YP +PPTV+ ++ ++HPNI G+ICL++L+ WSP+ D+ ++ + L +PN + P N +AA Sbjct: 77 FRFSVVFRDTYPIEPPTVKCLNTIYHPNIDYSGNICLNVLREDWSPVMDLQTVVLGLLFLFLEPNGSDPLNRQAA 151
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBE2K_MOUSE (Ubiquitin-conjugating enzyme E2 K OS=Mus musculus GN=Ube2k PE=2 SV=3) HSP 1 Score: 71.633 bits (174), Expect = 1.350e-12 Identity = 31/82 (37.80%), Postives = 54/82 (65.85%), Query Frame = -1 Query: 9 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSEN 251 ++L ++ E YP PP VRF+++++HPNI + G+ICLDIL++QW+ + +L S+Q+LL P+ P ++ A + +N Sbjct: 56 YQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQN 137
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBE2K_HUMAN (Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens GN=UBE2K PE=1 SV=3) HSP 1 Score: 71.633 bits (174), Expect = 1.350e-12 Identity = 31/82 (37.80%), Postives = 54/82 (65.85%), Query Frame = -1 Query: 9 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSEN 251 ++L ++ E YP PP VRF+++++HPNI + G+ICLDIL++QW+ + +L S+Q+LL P+ P ++ A + +N Sbjct: 56 YQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQN 137
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBE2K_BOVIN (Ubiquitin-conjugating enzyme E2 K OS=Bos taurus GN=UBE2K PE=1 SV=3) HSP 1 Score: 71.633 bits (174), Expect = 1.350e-12 Identity = 31/82 (37.80%), Postives = 54/82 (65.85%), Query Frame = -1 Query: 9 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSEN 251 ++L ++ E YP PP VRF+++++HPNI + G+ICLDIL++QW+ + +L S+Q+LL P+ P ++ A + +N Sbjct: 56 YQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQN 137
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBC37_ARATH (Probable ubiquitin carrier protein E2 37 OS=Arabidopsis thaliana GN=UBC37 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.350e-12 Identity = 34/87 (39.08%), Postives = 52/87 (59.77%), Query Frame = -1 Query: 3 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL----QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKR 251 F L +Q E YP +PP V F + ++HPNI G ICLDIL + W P +++ +LTS++ LL +PNP+ E +R + N++ Sbjct: 64 FNLKIQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPPKGAWQPSLNISTVLTSMRLLLSEPNPDDGLMCEVSREYKYNRQ 150 The following BLAST results are available for this feature:
BLAST of CX308756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 215
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308756 ID=CX308756; Name=CX308756; organism=Citrus clementina; type=EST; length=251bpback to top |