CX308756
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBCD4_DROME (Ubiquitin-conjugating enzyme E2-22 kDa OS=Drosophila melanogaster GN=UbcD4 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 1.143e-11 Identity = 32/81 (39.51%), Postives = 51/81 (62.96%), Query Frame = -1 Query: 12 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSE 251 F L ++ E YP PP VRF++R++HPNI + G+ICLDIL++ W+ + +L S+Q+LL P+ P ++ A F + Sbjct: 56 FVLEIKVPETYPFNPPKVRFITRIWHPNISSVTGAICLDILKDNWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVAYQFKD 136
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBE2H_MOUSE (Ubiquitin-conjugating enzyme E2 H OS=Mus musculus GN=Ube2h PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.492e-11 Identity = 30/80 (37.50%), Postives = 51/80 (63.75%), Query Frame = -1 Query: 18 FKLTLQFTEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILTS-IQSLLCDPNPNSPANSEAARLF 251 +K+ + + YP K P++ F++++FHPNI A G++CLD++ W+ +YD+ I S + LL PNP P N +AA ++ Sbjct: 51 WKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMY 130
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBE2H_HUMAN (Ubiquitin-conjugating enzyme E2 H OS=Homo sapiens GN=UBE2H PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.492e-11 Identity = 30/80 (37.50%), Postives = 51/80 (63.75%), Query Frame = -1 Query: 18 FKLTLQFTEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILTS-IQSLLCDPNPNSPANSEAARLF 251 +K+ + + YP K P++ F++++FHPNI A G++CLD++ W+ +YD+ I S + LL PNP P N +AA ++ Sbjct: 51 WKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMY 130
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBE2H_BOVIN (Ubiquitin-conjugating enzyme E2 H OS=Bos taurus GN=UBE2H PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.492e-11 Identity = 30/80 (37.50%), Postives = 51/80 (63.75%), Query Frame = -1 Query: 18 FKLTLQFTEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILTS-IQSLLCDPNPNSPANSEAARLF 251 +K+ + + YP K P++ F++++FHPNI A G++CLD++ W+ +YD+ I S + LL PNP P N +AA ++ Sbjct: 51 WKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMY 130
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBC8_SCHPO (Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe GN=ubc8 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.492e-11 Identity = 33/79 (41.77%), Postives = 50/79 (63.29%), Query Frame = -1 Query: 21 FKLTLQFTEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAIL-TSIQSLLCDPNPNSPANSEAARL 251 +K+ ++ +YP K P++ FV+R+FHPNI GS+CLD++ WSP++D+ I + LL PN + P N EAA L Sbjct: 49 WKVHVELPSEYPWKSPSIGFVNRIFHPNIDELSGSVCLDVINQTWSPMFDMINIFEVFLPQLLRYPNASDPLNGEAAAL 127
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: RCE1_ARATH (NEDD8-conjugating enzyme Ubc12 OS=Arabidopsis thaliana GN=RCE1 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.492e-11 Identity = 26/83 (31.33%), Postives = 50/83 (60.24%), Query Frame = -1 Query: 3 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKR 251 F T Q + YP++ P V+ ++++HPNI +G++CL+IL+ W P+ ++ ++ + L +PN P N +AA + +N + Sbjct: 78 FVFTFQVSPVYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNSEDPLNHDAAAVLRDNPK 160
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBC14_SCHPO (Ubiquitin-conjugating enzyme E2 14 OS=Schizosaccharomyces pombe GN=ubc14 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.949e-11 Identity = 30/83 (36.14%), Postives = 52/83 (62.65%), Query Frame = -1 Query: 6 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ-WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENK 251 F +L+F DYP +PPT+ F +R++HPN ++G++CL IL+ Q + P + ++L I LL +PNP+ P + A + ++ Sbjct: 56 FHFSLKFPLDYPFQPPTIEFTTRIYHPNFDSEGNVCLAILKQQVFKPSIKLRSVLEQILQLLREPNPDDPLVASIAEQYRNDR 138
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBE2U_MACFA (Ubiquitin-conjugating enzyme E2 U OS=Macaca fascicularis GN=UBE2U PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.545e-11 Identity = 33/85 (38.82%), Postives = 55/85 (64.71%), Query Frame = -1 Query: 6 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQN--QWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENK 251 F+LT+ FT +Y PP V+FV+ FHPN+ G C+D L N +W+ Y +++IL ++Q +L +P +P N EAAR+ ++++ Sbjct: 53 FQLTIHFTSEYNYAPPVVKFVTIPFHPNVDPHTGQPCIDFLDNPKKWNTNYTLSSILLALQVMLSNPVLENPVNLEAARILTKDE 137
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBC21_CAEEL (Probable ubiquitin-conjugating enzyme E2 21 OS=Caenorhabditis elegans GN=ubc-21 PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 2.545e-11 Identity = 33/97 (34.02%), Postives = 56/97 (57.73%), Query Frame = -1 Query: 9 FKLTLQFTEDYPNKPPTV---------------RFVSRMFHPNIYAD-GSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSEN 251 F++ + E YP +PP V +FV+R++HPNI + G+ICLDIL+++W+ + +L S+Q++LC P P+ P ++ A+ F N Sbjct: 70 FEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRIWHPNISSQTGTICLDILKDKWTASLTLRTVLLSLQAMLCSPEPSDPQDAVVAKQFINN 166
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UB12L_ARATH (Probable NEDD8-conjugating enzyme Ubc12-like OS=Arabidopsis thaliana GN=RCE2 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.545e-11 Identity = 26/83 (31.33%), Postives = 50/83 (60.24%), Query Frame = -1 Query: 3 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKR 251 F + Q + YP++ P V+ ++++HPNI +G++CL+IL+ W P+ ++ ++ + L +PN P N EAA + +N + Sbjct: 79 FVFSFQVSNMYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNYEDPLNHEAAAVLRDNPK 161 The following BLAST results are available for this feature:
BLAST of CX308756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 215
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308756 ID=CX308756; Name=CX308756; organism=Citrus clementina; type=EST; length=251bpback to top |