CX308756
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBE2S_DANRE (Ubiquitin-conjugating enzyme E2 S OS=Danio rerio GN=ube2s PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.342e-11 Identity = 29/81 (35.80%), Postives = 48/81 (59.26%), Query Frame = -1 Query: 9 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSEN 251 F++ L +D+P PP F++++FHPN+ G IC+++L+ W + +L +I+ LL PNP S N EA +L E+ Sbjct: 60 FRMRLVLGKDFPAVPPRGYFLTKIFHPNVGHKGEICVNVLKRDWKAELGLRHVLLTIKCLLIHPNPESALNEEAGKLLLED 140
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UB2L6_RAT (Ubiquitin/ISG15-conjugating enzyme E2 L6 OS=Rattus norvegicus GN=Ube2l6 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.670e-11 Identity = 29/82 (35.37%), Postives = 47/82 (57.32%), Query Frame = -1 Query: 9 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ-WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSEN 251 F L + F +YP KPPT+RF ++++HPNI DG +CL ++ + W P +L ++ L+ PN P E A L +++ Sbjct: 51 FGLRIDFPREYPLKPPTLRFTTKIYHPNISEDGLVCLPLISTENWKPYTKAYQVLEALNILVSRPNLEEPVRLELADLLTQD 132
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBE2U_HUMAN (Ubiquitin-conjugating enzyme E2 U OS=Homo sapiens GN=UBE2U PE=1 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.406e-11 Identity = 32/85 (37.65%), Postives = 54/85 (63.53%), Query Frame = -1 Query: 6 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQN--QWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENK 251 F+LT+ FT +Y PP V+F++ FHPN+ G C+D L N +W+ Y +++IL ++Q +L +P +P N EAAR+ +++ Sbjct: 53 FQLTIHFTSEYNYAPPVVKFITIPFHPNVDPHTGQPCIDFLDNPEKWNTNYTLSSILLALQVMLSNPVLENPVNLEAARILVKDE 137
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBC1_MIMIV (Probable ubiquitin-conjugating enzyme E2 L460 OS=Acanthamoeba polyphaga mimivirus GN=UBC PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.406e-11 Identity = 32/83 (38.55%), Postives = 50/83 (60.24%), Query Frame = -1 Query: 6 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ-WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENK 251 F+L ++ + DYP P V+F++ + H N+ G ICL+IL+ W+ ++ +I+ SI LL PNP P NSE A L+ +K Sbjct: 56 FELEIELSNDYPYSSPKVKFITPIQHMNVNDKGDICLNILKKDGWNASLNIISIIWSIIVLLDQPNPEDPFNSELASLYRNDK 138
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: COP10_ARATH (Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana GN=COP10 PE=1 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.672e-11 Identity = 30/78 (38.46%), Postives = 47/78 (60.26%), Query Frame = -1 Query: 18 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLF 251 F L + F DYP KPP + F +R++H N+ G + ++IL++ WSP + +L +I+S+ P P SPA ARL+ Sbjct: 85 FFLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIFLKPEPYSPALPVIARLY 162 The following BLAST results are available for this feature:
BLAST of CX308756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 215
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308756 ID=CX308756; Name=CX308756; organism=Citrus clementina; type=EST; length=251bpback to top |