CX308756
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBC36_ARATH (Ubiquitin carrier protein E2 36 OS=Arabidopsis thaliana GN=UBC36 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 9.986e-16 Identity = 37/82 (45.12%), Postives = 54/82 (65.85%), Query Frame = -1 Query: 6 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENK 251 FKL L E+YP P VRF+++++HPNI G ICLDIL+++WSP + +L SIQ+LL PNP+ P + A+ + N+ Sbjct: 54 FKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNE 135
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBC35_ARATH (Ubiquitin carrier protein E2 35 OS=Arabidopsis thaliana GN=UBC35 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 9.986e-16 Identity = 37/82 (45.12%), Postives = 54/82 (65.85%), Query Frame = -1 Query: 6 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENK 251 FKL L E+YP P VRF+++++HPNI G ICLDIL+++WSP + +L SIQ+LL PNP+ P + A+ + N+ Sbjct: 54 FKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNE 135
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBC12_YEAST (NEDD8-conjugating enzyme UBC12 OS=Saccharomyces cerevisiae GN=UBC12 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 9.986e-16 Identity = 35/79 (44.30%), Postives = 52/79 (65.82%), Query Frame = -1 Query: 3 LQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKR 239 L F E YP +PP V + ++FHPNI G++CL+IL+ WSP D+ +I+T + L +PNPN P N +AA+L E ++ Sbjct: 84 LDFNEVYPIEPPKVVCLKKIFHPNIDLKGNVCLNILREDWSPALDLQSIITGLLFLFLEPNPNDPLNKDAAKLLCEGEK 162
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBE2N_RAT (Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus GN=Ube2n PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.304e-15 Identity = 36/82 (43.90%), Postives = 54/82 (65.85%), Query Frame = -1 Query: 6 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENK 251 FKL L E+YP P VRF+++++HPN+ G ICLDIL+++WSP + +L SIQ+LL PNP+ P ++ A + N+ Sbjct: 52 FKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKSNE 133
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBE2N_PONAB (Ubiquitin-conjugating enzyme E2 N OS=Pongo abelii GN=UBE2N PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.703e-15 Identity = 36/82 (43.90%), Postives = 54/82 (65.85%), Query Frame = -1 Query: 6 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENK 251 FKL L E+YP P VRF+++++HPN+ G ICLDIL+++WSP + +L SIQ+LL PNP+ P ++ A + N+ Sbjct: 52 FKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNE 133
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBE2N_MOUSE (Ubiquitin-conjugating enzyme E2 N OS=Mus musculus GN=Ube2n PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.703e-15 Identity = 36/82 (43.90%), Postives = 54/82 (65.85%), Query Frame = -1 Query: 6 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENK 251 FKL L E+YP P VRF+++++HPN+ G ICLDIL+++WSP + +L SIQ+LL PNP+ P ++ A + N+ Sbjct: 52 FKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNE 133
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBE2N_HUMAN (Ubiquitin-conjugating enzyme E2 N OS=Homo sapiens GN=UBE2N PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.703e-15 Identity = 36/82 (43.90%), Postives = 54/82 (65.85%), Query Frame = -1 Query: 6 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENK 251 FKL L E+YP P VRF+++++HPN+ G ICLDIL+++WSP + +L SIQ+LL PNP+ P ++ A + N+ Sbjct: 52 FKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNE 133
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBE2N_BOVIN (Ubiquitin-conjugating enzyme E2 N OS=Bos taurus GN=UBE2N PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.703e-15 Identity = 36/82 (43.90%), Postives = 54/82 (65.85%), Query Frame = -1 Query: 6 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENK 251 FKL L E+YP P VRF+++++HPN+ G ICLDIL+++WSP + +L SIQ+LL PNP+ P ++ A + N+ Sbjct: 52 FKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNE 133
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: UBC3_YEAST (Ubiquitin-conjugating enzyme E2-34 kDa OS=Saccharomyces cerevisiae GN=CDC34 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.703e-15 Identity = 40/93 (43.01%), Postives = 54/93 (58.06%), Query Frame = -1 Query: 9 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ------------WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSEN 251 FK ++F ED+P PP RF ++HPN+Y DG +C+ IL WSP+ V ++L SI SLL DPN NSPAN +AA + +N Sbjct: 60 FKAQMRFPEDFPFSPPQFRFTPAIYHPNVYRDGRLCISILHQSGDPMTDEPDAETWSPVQTVESVLISIVSLLEDPNINSPANVDAAVDYRKN 152
BLAST of CX308756 vs. ExPASy Swiss-Prot
Match: Y1A1_ENCCU (Probable ubiquitin-conjugating enzyme E2 ECU01_1010 OS=Encephalitozoon cuniculi GN=ECU01_1010 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.905e-15 Identity = 36/94 (38.30%), Postives = 59/94 (62.77%), Query Frame = -1 Query: 9 KLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ--------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSEN 248 K ++F YP +PPT++FVS+MFHPNIY DG +C+ IL+ ++W+P+ ++ I+ SI +L PN +SPAN +A+ ++ +N Sbjct: 86 KAVMKFPSSYPLRPPTLKFVSKMFHPNIYEDGKMCISILEEDKQQDSSVFGDPKDKWTPVQNIRTIVMSIVVILNSPNISSPANVDASVMYRDN 179 The following BLAST results are available for this feature:
BLAST of CX308756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 215
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308756 ID=CX308756; Name=CX308756; organism=Citrus clementina; type=EST; length=251bpback to top |