CX308789
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308789 vs. ExPASy Swiss-Prot
Match: ARR19_ARATH (Putative two-component response regulator ARR19 OS=Arabidopsis thaliana GN=ARR19 PE=2 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 6.101e-29 Identity = 79/233 (33.91%), Postives = 122/233 (52.36%), Query Frame = -2 Query: 1 QFPAGLRVLVVDDDITVXRILEQMLRRCLYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKR---------------WNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQL-GIDKA 651 QFP VLVVD + T ++Q++++ Y V+ + A AL L K ++V+ D HMP +DG + L+ I ++DLPV++MS D + +VM+ +GACDY++KP++EE + NIWQH+VRKR W+E + S L TD G D + S G G ++K+ +KPR+ W+ ELHQ+F+ A+ + GI+KA Sbjct: 29 QFPGNTNVLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFHMPGIDGLQALKSITSKLDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQHIVRKRLIFKPDVAPPKPRMTWSEVFQPVQS-HLVPTD----GLDRDHFDSITINGGNGIQNMEKKQ---------------GKKPRKPRMTWTEELHQKFLEAIEIIGGIEKA 241
BLAST of CX308789 vs. ExPASy Swiss-Prot
Match: ARR20_ARATH (Putative two-component response regulator ARR20 OS=Arabidopsis thaliana GN=ARR20 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.092e-25 Identity = 70/214 (32.71%), Postives = 114/214 (53.27%), Query Frame = -2 Query: 1 RVLVVDDDITVXRILEQMLRRCLYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNEN--KEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLG-IDKA 633 RVL+V D L+ ++ + Y VT A+ L + K D+V+ D HMPD++G L IG +MDLPV++MS + + VM I++GACD+L+KP+ +E + +W+HV RKR +++ + SG++E ++ S EG++ T ++ S TKKPR+ W+ ELH +F AV ++G ++KA Sbjct: 42 RVLLVGADSNSS--LKNLMTQYSYQVTKYESGEEAMAFLMKNKHEIDLVIWDFHMPDINGLDALNIIGKQMDLPVVIMSHEYKKETVMESIKYGACDFLVKPVSKEVIAVLWRHVYRKRMSKSGLDKPGESGTVESDPDEYDDLEQDNLYESNEEGSKNTCD----------------HKEEKSPTKKPRMQWTPELHHKFEVAVEKMGSLEKA 237
BLAST of CX308789 vs. ExPASy Swiss-Prot
Match: APRR9_ARATH (Two-component response regulator-like APRR9 OS=Arabidopsis thaliana GN=APRR9 PE=2 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 1.114e-22 Identity = 55/149 (36.91%), Postives = 90/149 (60.40%), Query Frame = -2 Query: 202 LRVLVVDDDITVXRILEQMLRRCLYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGFKLL----EHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDE 636 LRVL+V+ D + +I+ +LR+C Y V S A +L+E+ D++L+++ +P + GF LL EH + ++PVIMMS+ + V++ + GA DYLIKP+R+ ELKN+WQHV R+ + ++ SL + H+ +DE Sbjct: 37 LRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVLKEKSHNIDLILTELDLPSISGFALLALVMEHEACK-NIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHVWRRLTLRDDPTAHAQSLPASQHNLEDTDE 184
BLAST of CX308789 vs. ExPASy Swiss-Prot
Match: PRR73_ORYSJ (Two-component response regulator-like PRR73 OS=Oryza sativa subsp. japonica GN=PRR73 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.682e-21 Identity = 62/192 (32.29%), Postives = 96/192 (50.00%), Query Frame = -2 Query: 70 LRVLVVDDDITVXRILEQMLRRCLYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEM---DLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPR 636 LRVL+V++D + +++ +LR+C Y V A L + + D+VL++V MP + G LL I D+PVIMMS++ + V + + GA D+L+KPIR+ ELKN+WQHV R+ + + SG + + DE E S N E ++DD + + DD S R Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGIRTQKCTKPKVDDEYENNSGSNNDNE-------------DDDDNDEDDDDLSVGHNAR 259
BLAST of CX308789 vs. ExPASy Swiss-Prot
Match: PRR73_ORYSI (Two-component response regulator-like PRR73 OS=Oryza sativa subsp. indica GN=PRR73 PE=2 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 4.682e-21 Identity = 62/192 (32.29%), Postives = 96/192 (50.00%), Query Frame = -2 Query: 70 LRVLVVDDDITVXRILEQMLRRCLYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEM---DLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPR 636 LRVL+V++D + +++ +LR+C Y V A L + + D+VL++V MP + G LL I D+PVIMMS++ + V + + GA D+L+KPIR+ ELKN+WQHV R+ + + SG + + DE E S N E ++DD + + DD S R Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGIRTQKCTKPKVDDEYENNSGSNNDNE-------------DDDDNDEDDDDLSVGHNAR 259
BLAST of CX308789 vs. ExPASy Swiss-Prot
Match: PRR95_ORYSJ (Two-component response regulator-like PRR95 OS=Oryza sativa subsp. japonica GN=PRR95 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.115e-21 Identity = 67/194 (34.54%), Postives = 106/194 (54.64%), Query Frame = -2 Query: 85 LRVLVVDDDITVXRILEQMLRRCLYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMD----LPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNEN----KEHENSGSLEETDHHKRGSDEIEYASS--VNEGTEGTFKAQRKRISAKEEDDGELESDDPST 636 +RVL+ + D + I+ +LR+C Y V S A +IL+E+ D+VL++V +P M GF LL I +E D +PVIMMS++ VS V + + GA D+L+KPIR+ EL+N+WQHV RK+ + + + +L E K G + E+ + V++ E + + + S ELE+D T Sbjct: 43 VRVLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTEVELPLMSGFLLLSTI-MEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWRKQLSSGVLDVQHTQQEDNLTERHEQKTGVTKAEHVTENVVHKNMECSEQESDAQSSCTR---SELEADSRQT 232
BLAST of CX308789 vs. ExPASy Swiss-Prot
Match: APRR3_ARATH (Two-component response regulator-like APRR3 OS=Arabidopsis thaliana GN=APRR3 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.115e-21 Identity = 70/219 (31.96%), Postives = 111/219 (50.68%), Query Frame = -2 Query: 13 LRVLVVDDDITVXRILEQMLRRCLYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGF----KLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAK----EEDDGELES---DDPSTTKKPRVVWSVELHQQFVSAVNQLG 636 L+VL+V++D + I+ +L+ C Y VT A IL + K C D+VL++V MP G K++ H L+ ++PVIMMS+ + V + + +GA D+L+KPIR+ ELKN+WQHV R+ H +SGS E+ H + S ++ S+ + + + + S DG ++ S TK+ S QF A N+ G Sbjct: 64 LKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLTEVDMPVHSGTGLLSKIMSHKTLK-NIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHVWRRC------HSSSGSGSESGIHDKKS--VKPESTQGSENDASISDEHRNESGSSGGLSNQDGGSDNGSGTQSSWTKRASDTKSTSPSNQFPDAPNKKG 273
BLAST of CX308789 vs. ExPASy Swiss-Prot
Match: PRR37_ORYSI (Two-component response regulator-like PRR37 OS=Oryza sativa subsp. indica GN=PRR37 PE=2 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 3.964e-20 Identity = 52/157 (33.12%), Postives = 85/157 (54.14%), Query Frame = -2 Query: 175 LRVLVVDDDITVXRILEQMLRRCLYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNE 636 ++VL+VD D + +++ +LR C+Y V A L + + D+VL++V MP + G LL I + ++PVIMMS++ + V + + GA D+L+KPIR+ ELKN+WQHV R+ + + SG + + DE S N+ Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGIQTQKCAKSKSGDESNNNSGSND 218
BLAST of CX308789 vs. ExPASy Swiss-Prot
Match: PRR37_ORYSJ (Two-component response regulator-like PRR37 OS=Oryza sativa subsp. japonica GN=PRR37 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.830e-20 Identity = 51/157 (32.48%), Postives = 85/157 (54.14%), Query Frame = -2 Query: 175 LRVLVVDDDITVXRILEQMLRRCLYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNE 636 ++VL+VD D + +++ +LR C+Y V A L + + D+VL++V MP + G LL I + ++PVIMMS++ + V + + GA D+L+KPIR+ ELKN+WQHV R+ + + SG + + DE + N+ Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGIQTQKCAKSKSGDESNNNNGSND 218
BLAST of CX308789 vs. ExPASy Swiss-Prot
Match: APRR5_ARATH (Two-component response regulator-like APRR5 OS=Arabidopsis thaliana GN=APRR5 PE=1 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 9.762e-19 Identity = 52/159 (32.70%), Postives = 87/159 (54.72%), Query Frame = -2 Query: 199 LRVLVVDDDITVXRILEQMLRRCLYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL----PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKR---------WNENKEHENSGSLEETDHHKRGSDEI 636 LRVL+V+ D + +I+ +LR+C Y V A +L+ + D++L++V +P + G+ LL I +E D+ PVIMMS V+ V + + GA DYL+KP+R EL+N+WQHV R++ WNE+ + + + + + D + Sbjct: 50 LRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPESVDLILTEVDLPSISGYALLTLI-MEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRRNELRNLWQHVWRRQTSLAPDSFPWNESVGQQKAEGASANNSNGKRDDHV 207 The following BLAST results are available for this feature:
BLAST of CX308789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308789 ID=CX308789; Name=CX308789; organism=Citrus clementina; type=EST; length=655bpback to top |