CX308789
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308789 vs. ExPASy Swiss-Prot
Match: APRR7_ARATH (Two-component response regulator-like APRR7 OS=Arabidopsis thaliana GN=APRR7 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.845e-18 Identity = 57/174 (32.76%), Postives = 90/174 (51.72%), Query Frame = -2 Query: 160 LRVLVVDDDITVXRILEQMLRRCLYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGF----KLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSG-----------SLEETDHHKRGSDEIEYASSVNEGTEGT 636 +RVL+V++D I+ +LR C Y V S A +L + D+VL++V MP + G K+L H ++PVIMMS+ + V + + GA D+L+KPIR+ ELK +WQHV R+ + + SG S++++D SDE E S ++G+ Sbjct: 78 IRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVLTEVIMPYLSGIGLLCKILNHKS-RRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHVWRRCQSSSGSGSESGTHQTQKSVKSKSIKKSDQDSGSSDENENGSIGLNASDGS 250
BLAST of CX308789 vs. ExPASy Swiss-Prot
Match: PRR1_ORYSJ (Two-component response regulator-like PRR1 OS=Oryza sativa subsp. japonica GN=PRR1 PE=2 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 3.140e-17 Identity = 46/123 (37.40%), Postives = 73/123 (59.35%), Query Frame = -2 Query: 277 LRVLVVDDDITVXRILEQMLRRCLYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKR 636 +R+L+ D D + R + ++L C Y VT +N+L G D++L++V +P FK+L++I +L P+IMMS VS V++ +R GA +YL+KP+R EL N+W HV R+R Sbjct: 28 VRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEVDLPVSKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVWRRR 150
BLAST of CX308789 vs. ExPASy Swiss-Prot
Match: APRR1_ARATH (Two-component response regulator-like APRR1 OS=Arabidopsis thaliana GN=APRR1 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.559e-16 Identity = 58/185 (31.35%), Postives = 90/185 (48.65%), Query Frame = -2 Query: 91 LRVLVVDDDITVXRILEQMLRRCLYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDP 636 +R+L+ D+D T + +L C Y VT A ++ L D++L+++ +P G K+L +I + DL PVIMMS V V++ ++ GA DYL+KP+R EL N+W H+ R+R +N S D GSD+ S N + F + + DD L S +P Sbjct: 19 VRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAEGPDIDIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNMLSY---DFDLVGSDQ----SDPNTNSTNLF--------SDDTDDRSLRSTNP 188
BLAST of CX308789 vs. ExPASy Swiss-Prot
Match: ARR21_ARATH (Putative two-component response regulator ARR21 OS=Arabidopsis thaliana GN=ARR21 PE=2 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.036e-16 Identity = 60/237 (25.32%), Postives = 108/237 (45.57%), Query Frame = -2 Query: 1 LRVLVVDDDITVXRILEQMLRRCLYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEM-DLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETD------------------------HHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKA 636 + V+VVDDD I+ +ML+ Y V AL+ L+ ++ D++++D +MP M+G +L + I E +LPV++MS+D + + GA ++ KPI +L I+Q + + N + ++ D K S + + T+G+ K ++++ + DDGE S KK ++ W+ LH F+ A+ +G+DKA Sbjct: 16 INVMVVDDDHVFLDIMSRMLQHSKYRVIAVDDPKKALSTLKIQRDNIDLIITDYYMPGMNGLQLKKQITQEFGNLPVLVMSSD--TNKEEESLSCGAMGFIPKPIHPTDLTKIYQFALSNKRNGKSTLSTEQNHKDADVSVPQQITLVPEQADVLKTKRKNCSFKSDSRTVNSTNGSCVSTDGSRKNRKRKPNGGPSDDGESMS---QPAKKKKIQWTDSLHDLFLQAIRHIGLDKA 247
BLAST of CX308789 vs. ExPASy Swiss-Prot
Match: PDE2_DICDI (3',5'-cyclic-nucleotide phosphodiesterase regA OS=Dictyostelium discoideum GN=regA PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.117e-14 Identity = 59/187 (31.55%), Postives = 93/187 (49.73%), Query Frame = -2 Query: 100 PAGLRVLVVDDDITVXRILEQMLRRCLYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGFKLLEHIG---LEMDLPVIMMSADG-RVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSL-EETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGELES 645 P+ +R+LV DDD +IL +L++ YNVT +A + + + +D+VL+DV MP + GF LL+ I + +PVI+MS I+ G D+L KPI +E LK V++ W KE E +L +E + + + E+E +E E T K + +KE + L S Sbjct: 157 PSKVRILVADDDDVQRKILNNLLKKFHYNVTLVPNGEIAWEYINKGQQKYDLVLTDVMMPHITGFDLLQRINDHPVHRHIPVILMSGTAVDYKYANDTIKIGGQDFLTKPIAKELLKKKIDTVLQSIWQRRKEEEYKATLAQEREKGNKLAKEMELKE--HEIEELTKKVSKMSSISKEAMESPLVS 341
BLAST of CX308789 vs. ExPASy Swiss-Prot
Match: YCF27_GUITH (Probable transcriptional regulator ycf27 OS=Guillardia theta GN=ycf27 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.459e-14 Identity = 43/118 (36.44%), Postives = 72/118 (61.02%), Query Frame = -2 Query: 280 RVLVVDDDITVXRILEQMLRRCLYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 633 +VL+VDD+ ++ +ILE L Y V T S ALN+ + DVV+ D+ MP +DG+ + + I + D+P+IM++A G V+ + G+ GA DY++KP +EL+ + V+R+ Sbjct: 16 KVLIVDDEASIRKILETRLSMIGYFVVTASDGEEALNLFHQEMP--DVVILDIMMPKLDGYGVCQEIRKDSDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRAVLRR 131
BLAST of CX308789 vs. ExPASy Swiss-Prot
Match: ZRAR_ECO57 (Transcriptional regulatory protein zraR OS=Escherichia coli O157:H7 GN=zraR PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.240e-14 Identity = 46/109 (42.20%), Postives = 65/109 (59.63%), Query Frame = -2 Query: 307 VLVVDDDITVXRILEQMLRRCLYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGFKLLEHI-GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELK 630 +LVVDDDI+ IL+ +LR YNV + AL +RER FD+VL DV M +MDG L+ I L +PV++M+A V + ++ GA DYLIKP+ + L+ Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGIATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQ 114
BLAST of CX308789 vs. ExPASy Swiss-Prot
Match: YCF27_CYAPA (Probable transcriptional regulator ycf27 OS=Cyanophora paradoxa GN=ycf27 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.240e-14 Identity = 43/121 (35.54%), Postives = 73/121 (60.33%), Query Frame = -2 Query: 271 RVLVVDDDITVXRILEQMLRRCLYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWN 633 ++LVVDD+I++ RILE L Y V T + AL I + ++V+ DV MP +DG+ + + + E D+P+IM++A G V+ + G+ GA DY++KP +EL+ + ++R+ N Sbjct: 7 KILVVDDEISIRRILETRLSMIGYEVVTAADGEEALTIFQLEHP--NLVVLDVMMPKLDGYGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSLLRRTEN 125
BLAST of CX308789 vs. ExPASy Swiss-Prot
Match: YCF27_PORPU (Probable transcriptional regulator ycf27 OS=Porphyra purpurea GN=ycf27 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.235e-13 Identity = 44/118 (37.29%), Postives = 70/118 (59.32%), Query Frame = -2 Query: 280 RVLVVDDDITVXRILEQMLRRCLYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 633 ++LVVDD+ ++ RILE L Y V T S AL I R+ +V+ DV MP +DG+ + + + E D+P+IM++A G V + G+ GA DY++KP +EL+ + V+R+ Sbjct: 7 KILVVDDEASIRRILETRLTIIGYEVITASNGEEALIIFRKEYP--SLVVLDVMMPKLDGYGVCQELRKESDVPIIMLTALGEVCDRITGLEIGADDYVVKPFSPKELEARIRSVLRR 122
BLAST of CX308789 vs. ExPASy Swiss-Prot
Match: YCF27_PORYE (Probable transcriptional regulator ycf27 OS=Porphyra yezoensis GN=ycf27 PE=3 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 1.613e-13 Identity = 43/118 (36.44%), Postives = 70/118 (59.32%), Query Frame = -2 Query: 280 RVLVVDDDITVXRILEQMLRRCLYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 633 ++LVVDD+ ++ RILE L Y V T S AL + R+ +V+ DV MP +DG+ + + + E D+P+IM++A G V + G+ GA DY++KP +EL+ + V+R+ Sbjct: 7 KILVVDDEASIRRILETRLTIIGYEVITASNGEEALLVFRKEYP--SLVVLDVMMPKLDGYGVCQELRKESDVPIIMLTALGEVCDRITGLEIGADDYVVKPFSPKELEARIRSVLRR 122 The following BLAST results are available for this feature:
BLAST of CX308789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308789 ID=CX308789; Name=CX308789; organism=Citrus clementina; type=EST; length=655bpback to top |