CX308839
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308839 vs. ExPASy Swiss-Prot
Match: RL30_MOUSE (60S ribosomal protein L30 OS=Mus musculus GN=Rpl30 PE=2 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 2.714e-13 Identity = 35/49 (71.43%), Postives = 40/49 (81.63%), Query Frame = 2 Query: 71 ESINNRLALVMKSGKYTLGYKTVLRSLRASKGKLIILSNNCPPLRKSEI 217 ESIN+RL LVMKSGKY LGYK L+ +R K KL+IL+NNCP LRKSEI Sbjct: 12 ESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
BLAST of CX308839 vs. ExPASy Swiss-Prot
Match: RL30_MACFA (60S ribosomal protein L30 OS=Macaca fascicularis GN=RPL30 PE=3 SV=3) HSP 1 Score: 73.9442 bits (180), Expect = 2.714e-13 Identity = 35/49 (71.43%), Postives = 40/49 (81.63%), Query Frame = 2 Query: 71 ESINNRLALVMKSGKYTLGYKTVLRSLRASKGKLIILSNNCPPLRKSEI 217 ESIN+RL LVMKSGKY LGYK L+ +R K KL+IL+NNCP LRKSEI Sbjct: 12 ESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
BLAST of CX308839 vs. ExPASy Swiss-Prot
Match: RL30_HUMAN (60S ribosomal protein L30 OS=Homo sapiens GN=RPL30 PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 2.714e-13 Identity = 35/49 (71.43%), Postives = 40/49 (81.63%), Query Frame = 2 Query: 71 ESINNRLALVMKSGKYTLGYKTVLRSLRASKGKLIILSNNCPPLRKSEI 217 ESIN+RL LVMKSGKY LGYK L+ +R K KL+IL+NNCP LRKSEI Sbjct: 12 ESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
BLAST of CX308839 vs. ExPASy Swiss-Prot
Match: RL30_CHICK (60S ribosomal protein L30 OS=Gallus gallus GN=RPL30 PE=3 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 2.714e-13 Identity = 35/49 (71.43%), Postives = 40/49 (81.63%), Query Frame = 2 Query: 71 ESINNRLALVMKSGKYTLGYKTVLRSLRASKGKLIILSNNCPPLRKSEI 217 ESIN+RL LVMKSGKY LGYK L+ +R K KL+IL+NNCP LRKSEI Sbjct: 12 ESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
BLAST of CX308839 vs. ExPASy Swiss-Prot
Match: RL30_BOVIN (60S ribosomal protein L30 OS=Bos taurus GN=RPL30 PE=3 SV=3) HSP 1 Score: 73.9442 bits (180), Expect = 2.714e-13 Identity = 35/49 (71.43%), Postives = 40/49 (81.63%), Query Frame = 2 Query: 71 ESINNRLALVMKSGKYTLGYKTVLRSLRASKGKLIILSNNCPPLRKSEI 217 ESIN+RL LVMKSGKY LGYK L+ +R K KL+IL+NNCP LRKSEI Sbjct: 12 ESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
BLAST of CX308839 vs. ExPASy Swiss-Prot
Match: RL30_SPOFR (60S ribosomal protein L30 OS=Spodoptera frugiperda GN=RpL30 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.544e-13 Identity = 35/49 (71.43%), Postives = 41/49 (83.67%), Query Frame = 2 Query: 71 ESINNRLALVMKSGKYTLGYKTVLRSLRASKGKLIILSNNCPPLRKSEI 217 ESIN+RLALVMKSGKY LGYK L++LR K KL+I++ N PPLRKSEI Sbjct: 12 ESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEI 60
BLAST of CX308839 vs. ExPASy Swiss-Prot
Match: RL30A_SCHPO (60S ribosomal protein L30-1 OS=Schizosaccharomyces pombe GN=rpl30a PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 1.347e-12 Identity = 31/49 (63.27%), Postives = 42/49 (85.71%), Query Frame = 2 Query: 71 ESINNRLALVMKSGKYTLGYKTVLRSLRASKGKLIILSNNCPPLRKSEI 217 ++IN +LAL MKSGKY LGYK+ L++LR+ K KLI+++ NCPPLRKSE+ Sbjct: 14 DTINAKLALTMKSGKYVLGYKSTLKTLRSGKAKLILIAGNCPPLRKSEL 62
BLAST of CX308839 vs. ExPASy Swiss-Prot
Match: RL30_ICTPU (60S ribosomal protein L30 OS=Ictalurus punctatus GN=rpl30 PE=3 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 2.297e-12 Identity = 34/49 (69.39%), Postives = 39/49 (79.59%), Query Frame = 2 Query: 71 ESINNRLALVMKSGKYTLGYKTVLRSLRASKGKLIILSNNCPPLRKSEI 217 ESIN+RL LVMKSGKY LGYK + +R K KL+IL+NNCP LRKSEI Sbjct: 12 ESINSRLQLVMKSGKYVLGYKQSQKMIRQGKAKLVILANNCPALRKSEI 60
BLAST of CX308839 vs. ExPASy Swiss-Prot
Match: RL30_YEAST (60S ribosomal protein L30 OS=Saccharomyces cerevisiae GN=RPL30 PE=1 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 1.140e-11 Identity = 33/49 (67.35%), Postives = 41/49 (83.67%), Query Frame = 2 Query: 71 ESINNRLALVMKSGKYTLGYKTVLRSLRASKGKLIILSNNCPPLRKSEI 217 ESIN +LALV+KSGKYTLGYK+ ++SLR K KLII++ N P LRKSE+ Sbjct: 8 ESINQKLALVIKSGKYTLGYKSTVKSLRQGKSKLIIIAANTPVLRKSEL 56
BLAST of CX308839 vs. ExPASy Swiss-Prot
Match: RL30B_SCHPO (60S ribosomal protein L30-2 OS=Schizosaccharomyces pombe GN=rpl30b PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.140e-11 Identity = 30/49 (61.22%), Postives = 42/49 (85.71%), Query Frame = 2 Query: 71 ESINNRLALVMKSGKYTLGYKTVLRSLRASKGKLIILSNNCPPLRKSEI 217 ++IN++LAL MKSGKY LGYK+ L++LR+ K KLI+++ N PPLRKSE+ Sbjct: 22 DTINSKLALTMKSGKYVLGYKSTLKTLRSGKAKLILIAANAPPLRKSEL 70 The following BLAST results are available for this feature:
BLAST of CX308839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX308839 ID=CX308839; Name=CX308839; organism=Citrus clementina; type=EST; length=218bpback to top |