CX308926
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB13_RAT (Ras-related protein Rab-13 OS=Rattus norvegicus GN=Rab13 PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 6.664e-15 Identity = 36/63 (57.14%), Postives = 49/63 (77.78%), Query Frame = 2 Query: 101 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 YD+LFKL+LIGDSGVGK+ L+ RF ++ FN STIG++F R++ I+ K +K Q+WDTAGQ Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQ 67
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB1C_DICDI (Ras-related protein Rab-1C OS=Dictyostelium discoideum GN=Rab1C PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.703e-15 Identity = 38/70 (54.29%), Postives = 48/70 (68.57%), Query Frame = 2 Query: 80 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 G + EYD L K+++IGDSGVGKS +L RF N F STIGV+F R++ +D K +K QIWDTAGQ Sbjct: 23 GSESHPEYDMLLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFCIRTIELDGKKIKLQIWDTAGQ 92
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB19_RAT (Ras-related protein Rab-19 OS=Rattus norvegicus GN=Rab19 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.703e-15 Identity = 36/66 (54.55%), Postives = 47/66 (71.21%), Query Frame = 2 Query: 92 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 DE DYLFK++LIGDS VGK+ ++ F ++ ++TIGV+F RSL ID K VK Q+WDTAGQ Sbjct: 11 DENVDYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQVWDTAGQ 76
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB19_MOUSE (Ras-related protein Rab-19 OS=Mus musculus GN=Rab19 PE=2 SV=3) HSP 1 Score: 78.9518 bits (193), Expect = 8.703e-15 Identity = 36/66 (54.55%), Postives = 47/66 (71.21%), Query Frame = 2 Query: 92 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 DE DYLFK++LIGDS VGK+ ++ F ++ ++TIGV+F RSL ID K VK Q+WDTAGQ Sbjct: 11 DENVDYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQVWDTAGQ 76
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB13_MESAU (Ras-related protein Rab-13 OS=Mesocricetus auratus GN=RAB13 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.703e-15 Identity = 36/63 (57.14%), Postives = 49/63 (77.78%), Query Frame = 2 Query: 101 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 YD+LFKL+LIGDSGVGK+ L+ RF ++ FN STIG++F R++ I+ K +K Q+WDTAGQ Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQ 67
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB4B_RAT (Ras-related protein Rab-4B OS=Rattus norvegicus GN=Rab4b PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.137e-14 Identity = 36/65 (55.38%), Postives = 47/65 (72.31%), Query Frame = 2 Query: 95 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 E YD+LFK ++IG +G GKS LL +F +N+F +S TIGVEF +R + + K VK QIWDTAGQ Sbjct: 3 ETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQ 67
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB4B_MOUSE (Ras-related protein Rab-4B OS=Mus musculus GN=Rab4b PE=2 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 1.137e-14 Identity = 36/65 (55.38%), Postives = 47/65 (72.31%), Query Frame = 2 Query: 95 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 E YD+LFK ++IG +G GKS LL +F +N+F +S TIGVEF +R + + K VK QIWDTAGQ Sbjct: 3 ETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQ 67
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB4B_HUMAN (Ras-related protein Rab-4B OS=Homo sapiens GN=RAB4B PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.137e-14 Identity = 36/65 (55.38%), Postives = 47/65 (72.31%), Query Frame = 2 Query: 95 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 E YD+LFK ++IG +G GKS LL +F +N+F +S TIGVEF +R + + K VK QIWDTAGQ Sbjct: 3 ETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQ 67
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB4B_DANRE (Ras-related protein Rab-4B OS=Danio rerio GN=rab4b PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.137e-14 Identity = 36/65 (55.38%), Postives = 47/65 (72.31%), Query Frame = 2 Query: 95 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 E YD+LFK ++IG +G GKS LL +F +N+F +S TIGVEF +R + + K VK QIWDTAGQ Sbjct: 3 ETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQ 67
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB4B_CANFA (Ras-related protein Rab-4B OS=Canis familiaris GN=RAB4B PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.137e-14 Identity = 36/65 (55.38%), Postives = 47/65 (72.31%), Query Frame = 2 Query: 95 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 E YD+LFK ++IG +G GKS LL +F +N+F +S TIGVEF +R + + K VK QIWDTAGQ Sbjct: 3 ETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQ 67 The following BLAST results are available for this feature:
BLAST of CX308926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 258
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308926 ID=CX308926; Name=CX308926; organism=Citrus clementina; type=EST; length=291bpback to top |