CX308926
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB2B_DICDI (Ras-related protein Rab-2B OS=Dictyostelium discoideum GN=rab2B PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.137e-14 Identity = 36/63 (57.14%), Postives = 47/63 (74.60%), Query Frame = 2 Query: 101 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 Y++LFK +++GDS VGKSNLL +F F S TIGVEF +RS+ I++K +K QIWDTAGQ Sbjct: 21 YEHLFKYIMVGDSAVGKSNLLLQFVDKRFAPNSDFTIGVEFGSRSININDKQIKLQIWDTAGQ 83
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB2A_MAIZE (Ras-related protein Rab-2-A OS=Zea mays GN=RAB2A PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.137e-14 Identity = 38/63 (60.32%), Postives = 44/63 (69.84%), Query Frame = 2 Query: 101 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + IDNK +K QIWDTAGQ Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNKPIKLQIWDTAGQ 65
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB13_MOUSE (Ras-related protein Rab-13 OS=Mus musculus GN=Rab13 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.137e-14 Identity = 36/63 (57.14%), Postives = 49/63 (77.78%), Query Frame = 2 Query: 101 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 YD+LFKL+LIGDSGVGK+ L+ RF ++ FN STIG++F R++ I+ K +K Q+WDTAGQ Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAGQ 67
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB13_HUMAN (Ras-related protein Rab-13 OS=Homo sapiens GN=RAB13 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.137e-14 Identity = 36/63 (57.14%), Postives = 49/63 (77.78%), Query Frame = 2 Query: 101 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 YD+LFKL+LIGDSGVGK+ L+ RF ++ FN STIG++F R++ I+ K +K Q+WDTAGQ Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB13_BOVIN (Ras-related protein Rab-13 OS=Bos taurus GN=RAB13 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.137e-14 Identity = 36/63 (57.14%), Postives = 49/63 (77.78%), Query Frame = 2 Query: 101 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 YD+LFKL+LIGDSGVGK+ L+ RF ++ FN STIG++F R++ I+ K +K Q+WDTAGQ Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKIKLQVWDTAGQ 67
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB2B_MAIZE (Ras-related protein Rab-2-B OS=Zea mays GN=RAB2B PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.484e-14 Identity = 38/63 (60.32%), Postives = 44/63 (69.84%), Query Frame = 2 Query: 101 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + IDNK +K QIWDTAGQ Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQ 65
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB2A_DICDI (Ras-related protein Rab-2A OS=Dictyostelium discoideum GN=rab2A PE=2 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 1.484e-14 Identity = 37/63 (58.73%), Postives = 44/63 (69.84%), Query Frame = 2 Query: 101 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 Y +LFK ++IGD+GVGKS LL +FT F TIGVEF R + IDNK +K QIWDTAGQ Sbjct: 2 YSFLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKAIKLQIWDTAGQ 64
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB1A_DICDI (Ras-related protein Rab-1A OS=Dictyostelium discoideum GN=rab1A PE=2 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 1.484e-14 Identity = 37/64 (57.81%), Postives = 48/64 (75.00%), Query Frame = 2 Query: 98 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 +Y YLFKL+LIGDSGVGKS LL RF + ++ STIGV+F R++ ++ K +K QIWDTAGQ Sbjct: 4 DYHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWDTAGQ 67
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB19_BOVIN (Ras-related protein Rab-19 OS=Bos taurus GN=RAB19 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.484e-14 Identity = 35/66 (53.03%), Postives = 47/66 (71.21%), Query Frame = 2 Query: 92 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 DE +DYLFK++LIGDS VGK+ ++ F + ++TIGV+F R+L ID K VK Q+WDTAGQ Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYMEAQQNTIGVDFTVRALEIDGKKVKMQVWDTAGQ 76
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RABD1_ARATH (Ras-related protein RABD1 OS=Arabidopsis thaliana GN=RABD1 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.939e-14 Identity = 39/64 (60.94%), Postives = 46/64 (71.88%), Query Frame = 2 Query: 98 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 EYDYLFKL+LIGDS VGKS LL RF + + STIGV+F R++ D K +K QIWDTAGQ Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWDTAGQ 67 The following BLAST results are available for this feature:
BLAST of CX308926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 258
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308926 ID=CX308926; Name=CX308926; organism=Citrus clementina; type=EST; length=291bpback to top |