CX308926
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB10_CANFA (Ras-related protein Rab-10 OS=Canis familiaris GN=RAB10 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.622e-14 Identity = 35/63 (55.56%), Postives = 47/63 (74.60%), Query Frame = 2 Query: 101 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 YD LFKL+LIGDSGVGK+ +L RF+ + FN STIG++F +++ + K +K QIWDTAGQ Sbjct: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB10_DISOM (Ras-related protein Rab-10 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.257e-13 Identity = 35/63 (55.56%), Postives = 47/63 (74.60%), Query Frame = 2 Query: 101 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 YD LFKL+LIGDSGVGK+ +L RF+ + FN STIG++F +++ + K +K QIWDTAGQ Sbjct: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKLQIWDTAGQ 68
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB8B_DICDI (Ras-related protein Rab-8B OS=Dictyostelium discoideum GN=rab8B PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.641e-13 Identity = 35/63 (55.56%), Postives = 46/63 (73.02%), Query Frame = 2 Query: 101 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 YD+L KL+LIGDSGVGKS LL RF+ F +TIG++F R++ ++ K +K QIWDTAGQ Sbjct: 12 YDFLVKLLLIGDSGVGKSCLLLRFSDGSFTPSFIATIGIDFKIRTIELEGKRIKLQIWDTAGQ 74
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB7_ARATH (Ras-related protein Rab7 OS=Arabidopsis thaliana GN=RAB7 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.641e-13 Identity = 30/60 (50.00%), Postives = 50/60 (83.33%), Query Frame = 2 Query: 110 LFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 L K++++GDSGVGK++L++++ N+F+ + K+TIG +F T+ L+ID+++V QIWDTAGQ Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNNKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQ 67
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB4A_RAT (Ras-related protein Rab-4A OS=Rattus norvegicus GN=Rab4a PE=2 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 1.641e-13 Identity = 34/65 (52.31%), Postives = 47/65 (72.31%), Query Frame = 2 Query: 95 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 E YD+LFK ++IG++G GKS LL +F + +F +S TIGVEF ++ + + K VK QIWDTAGQ Sbjct: 3 ETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQ 67
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB4A_HUMAN (Ras-related protein Rab-4A OS=Homo sapiens GN=RAB4A PE=1 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 1.641e-13 Identity = 34/65 (52.31%), Postives = 47/65 (72.31%), Query Frame = 2 Query: 95 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 E YD+LFK ++IG++G GKS LL +F + +F +S TIGVEF ++ + + K VK QIWDTAGQ Sbjct: 3 ETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQ 67
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB4A_BOVIN (Ras-related protein Rab-4A OS=Bos taurus GN=RAB4A PE=2 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 1.641e-13 Identity = 34/65 (52.31%), Postives = 47/65 (72.31%), Query Frame = 2 Query: 95 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 E YD+LFK ++IG++G GKS LL +F + +F +S TIGVEF ++ + + K VK QIWDTAGQ Sbjct: 3 ETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQ 67
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB30_MOUSE (Ras-related protein Rab-30 OS=Mus musculus GN=Rab30 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.641e-13 Identity = 35/65 (53.85%), Postives = 50/65 (76.92%), Query Frame = 2 Query: 95 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 E+YD+LFK+VLIG++GVGK+ L+ RFT+ F +TIGV+F +++ I+ + VK QIWDTAGQ Sbjct: 4 EDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQ 68
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB30_HUMAN (Ras-related protein Rab-30 OS=Homo sapiens GN=RAB30 PE=1 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 1.641e-13 Identity = 35/65 (53.85%), Postives = 50/65 (76.92%), Query Frame = 2 Query: 95 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 E+YD+LFK+VLIG++GVGK+ L+ RFT+ F +TIGV+F +++ I+ + VK QIWDTAGQ Sbjct: 4 EDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQ 68
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB30_BOVIN (Ras-related protein Rab-30 OS=Bos taurus GN=RAB30 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.641e-13 Identity = 35/65 (53.85%), Postives = 50/65 (76.92%), Query Frame = 2 Query: 95 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 E+YD+LFK+VLIG++GVGK+ L+ RFT+ F +TIGV+F +++ I+ + VK QIWDTAGQ Sbjct: 4 EDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQ 68 The following BLAST results are available for this feature:
BLAST of CX308926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 258
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308926 ID=CX308926; Name=CX308926; organism=Citrus clementina; type=EST; length=291bpback to top |