CX308926
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB2A_RAT (Ras-related protein Rab-2A OS=Rattus norvegicus GN=Rab2a PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.641e-13 Identity = 36/63 (57.14%), Postives = 43/63 (68.25%), Query Frame = 2 Query: 101 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 Y YLFK ++IGD+GVGKS LL +FT F T+GVEF R + ID K +K QIWDTAGQ Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTMGVEFGARMITIDGKQIKLQIWDTAGQ 65
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RYL1_YARLI (Ras-like GTP-binding protein RYL1 OS=Yarrowia lipolytica GN=RYL1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.144e-13 Identity = 36/63 (57.14%), Postives = 47/63 (74.60%), Query Frame = 2 Query: 101 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 YD L KL+LIGDSGVGKS LL RF +++F +TIG++F R++ I N+ VK Q+WDTAGQ Sbjct: 8 YDLLIKLLLIGDSGVGKSCLLLRFCEDQFTPSFITTIGIDFKIRTIDIGNQRVKLQVWDTAGQ 70
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: YPTV3_VOLCA (GTP-binding protein yptV3 OS=Volvox carteri GN=YPTV3 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.800e-13 Identity = 35/65 (53.85%), Postives = 45/65 (69.23%), Query Frame = 2 Query: 95 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 + +DY FK++L+GDSGVGKS +L+RFT F + STIGV+F + L D K K IWDTAGQ Sbjct: 4 DSHDYTFKVLLVGDSGVGKSCILTRFTSGIFEESTTSTIGVDFKVKYLTADGKRCKLTIWDTAGQ 68
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: SEC4_YEAST (Ras-related protein SEC4 OS=Saccharomyces cerevisiae GN=SEC4 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.656e-13 Identity = 34/65 (52.31%), Postives = 49/65 (75.38%), Query Frame = 2 Query: 95 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 + YD + K++LIGDSGVGKS LL RF +++FN +TIG++F +++ I+ K VK Q+WDTAGQ Sbjct: 15 KSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ 79
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: SEC4_CANGA (Ras-related protein SEC4 OS=Candida glabrata GN=SEC4 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.656e-13 Identity = 34/65 (52.31%), Postives = 49/65 (75.38%), Query Frame = 2 Query: 95 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 + YD + K++LIGDSGVGKS LL RF +++FN +TIG++F +++ I+ K VK Q+WDTAGQ Sbjct: 15 KSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ 79
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB4A_MOUSE (Ras-related protein Rab-4A OS=Mus musculus GN=Rab4a PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.656e-13 Identity = 33/65 (50.77%), Postives = 47/65 (72.31%), Query Frame = 2 Query: 95 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 E YD+LFK ++IG++G GKS LL +F + +F +S TIG+EF ++ + + K VK QIWDTAGQ Sbjct: 3 ETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGMEFGSKIINVGGKYVKLQIWDTAGQ 67
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB9B_PONAB (Ras-related protein Rab-9B OS=Pongo abelii GN=RAB9B PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.775e-13 Identity = 32/60 (53.33%), Postives = 45/60 (75.00%), Query Frame = 2 Query: 110 LFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 L K++L+GD GVGKS+L++R+ N+F+ ++ TIGVEF R L +D + V QIWDTAGQ Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB9B_MOUSE (Ras-related protein Rab-9B OS=Mus musculus GN=Rab9b PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.775e-13 Identity = 32/60 (53.33%), Postives = 45/60 (75.00%), Query Frame = 2 Query: 110 LFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 L K++L+GD GVGKS+L++R+ N+F+ ++ TIGVEF R L +D + V QIWDTAGQ Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB9B_HUMAN (Ras-related protein Rab-9B OS=Homo sapiens GN=RAB9B PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.775e-13 Identity = 32/60 (53.33%), Postives = 45/60 (75.00%), Query Frame = 2 Query: 110 LFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 L K++L+GD GVGKS+L++R+ N+F+ ++ TIGVEF R L +D + V QIWDTAGQ Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB10_CHICK (Ras-related protein Rab-10 OS=Gallus gallus GN=RAB10 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.775e-13 Identity = 34/63 (53.97%), Postives = 46/63 (73.02%), Query Frame = 2 Query: 101 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 YD LFKL+LIGDSGVGK+ +L RF+ + FN STIG++ +++ + K +K QIWDTAGQ Sbjct: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDLKIKTVELQGKKIKLQIWDTAGQ 68 The following BLAST results are available for this feature:
BLAST of CX308926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 258
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308926 ID=CX308926; Name=CX308926; organism=Citrus clementina; type=EST; length=291bpback to top |