CX308926
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: SEC4_CANAL (Ras-related protein SEC4 OS=Candida albicans GN=SEC4 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.237e-13 Identity = 33/63 (52.38%), Postives = 46/63 (73.02%), Query Frame = 2 Query: 101 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 YD + KL+L+GDSGVGKS LL RF +++FN +TIG++F R++ K +K Q+WDTAGQ Sbjct: 11 YDMIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQVWDTAGQ 73
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RABF1_DICDI (Ras-related protein RabF1 OS=Dictyostelium discoideum GN=rabF1-1 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 8.146e-13 Identity = 34/65 (52.31%), Postives = 49/65 (75.38%), Query Frame = 2 Query: 95 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 +EY++LFK VL GDSGVGK+++L R T + F E+ TIG+EF +++ I+ K +K QIWDTAG+ Sbjct: 3 KEYEHLFKFVLAGDSGVGKTSILFRITDDTFT-ETHITIGIEFKIKTVYIEGKPIKLQIWDTAGE 66
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB9A_RAT (Ras-related protein Rab-9A OS=Rattus norvegicus GN=Rab9a PE=2 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 8.146e-13 Identity = 32/60 (53.33%), Postives = 44/60 (73.33%), Query Frame = 2 Query: 110 LFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 LFK++L+GD GVGKS+L++R+ N+F+ + TIGVEF + L +D V QIWDTAGQ Sbjct: 7 LFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQ 66
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB9A_MOUSE (Ras-related protein Rab-9A OS=Mus musculus GN=Rab9a PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 8.146e-13 Identity = 32/60 (53.33%), Postives = 44/60 (73.33%), Query Frame = 2 Query: 110 LFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 LFK++L+GD GVGKS+L++R+ N+F+ + TIGVEF + L +D V QIWDTAGQ Sbjct: 7 LFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQ 66
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB9A_HUMAN (Ras-related protein Rab-9A OS=Homo sapiens GN=RAB9A PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 8.146e-13 Identity = 32/60 (53.33%), Postives = 44/60 (73.33%), Query Frame = 2 Query: 110 LFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 LFK++L+GD GVGKS+L++R+ N+F+ + TIGVEF + L +D V QIWDTAGQ Sbjct: 7 LFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQ 66
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB9A_CANFA (Ras-related protein Rab-9A OS=Canis familiaris GN=RAB9A PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 8.146e-13 Identity = 32/60 (53.33%), Postives = 44/60 (73.33%), Query Frame = 2 Query: 110 LFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 LFK++L+GD GVGKS+L++R+ N+F+ + TIGVEF + L +D V QIWDTAGQ Sbjct: 7 LFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQ 66
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB10_RAT (Ras-related protein Rab-10 OS=Rattus norvegicus GN=Rab10 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 8.146e-13 Identity = 34/63 (53.97%), Postives = 46/63 (73.02%), Query Frame = 2 Query: 101 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 YD LFKL+LIGDSGVGK+ +L RF+ + FN STI ++F +++ + K +K QIWDTAGQ Sbjct: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIEIDFKIKTVELQGKKIKLQIWDTAGQ 68
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: YPT4_SCHPO (GTP-binding protein ypt4 OS=Schizosaccharomyces pombe GN=ypt4 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.064e-12 Identity = 35/69 (50.72%), Postives = 47/69 (68.12%), Query Frame = 2 Query: 95 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRI----DNKVVKAQIWDTAGQ 289 E YDYL K+VL G SG GKS LL RF KN+++ + T+G++FA+R + + K +K QIWDTAGQ Sbjct: 4 ESYDYLVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTAGQ 72
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: YPTC5_CHLRE (GTP-binding protein YPTC5 OS=Chlamydomonas reinhardtii GN=YPTC5 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.389e-12 Identity = 29/60 (48.33%), Postives = 47/60 (78.33%), Query Frame = 2 Query: 110 LFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 L K++++GDSGVGK++L++++ + +F E K+TIG +F T+ + +D+K V QIWDTAGQ Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVQKKFTKEYKATIGADFLTKEIEVDDKKVTMQIWDTAGQ 67
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB7_SOYBN (Ras-related protein Rab7 OS=Glycine max PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.389e-12 Identity = 29/60 (48.33%), Postives = 49/60 (81.67%), Query Frame = 2 Query: 110 LFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 L K++++GDSGVGK++L++++ +F+ + K+TIG +F T+ L+ID+++V QIWDTAGQ Sbjct: 8 LLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQ 67 The following BLAST results are available for this feature:
BLAST of CX308926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 258
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308926 ID=CX308926; Name=CX308926; organism=Citrus clementina; type=EST; length=291bpback to top |