CX308963
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308963 vs. ExPASy Swiss-Prot
Match: MYB12_ARATH (Transcription factor MYB12 OS=Arabidopsis thaliana GN=MYB12 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.371e-28 Identity = 53/87 (60.92%), Postives = 68/87 (78.16%), Query Frame = 1 Query: 1 ISRHSEGRWNLLAKRSGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQ 261 I + EG W L K +GLKR GKSCRLRW+NYL+ D+KRGN+TP+E+ +++LHS GNRWS IA HLPGRTDNEIKNYW + + ++ Sbjct: 29 IQSNGEGSWRSLPKNAGLKRCGKSCRLRWINYLRSDLKRGNITPEEEELVVKLHSTLGNRWSLIAGHLPGRTDNEIKNYWNSHLSRK 115
BLAST of CX308963 vs. ExPASy Swiss-Prot
Match: GAM1_ORYSJ (Transcription factor GAMYB OS=Oryza sativa subsp. japonica GN=GAM1 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 4.403e-28 Identity = 50/89 (56.18%), Postives = 70/89 (78.65%), Query Frame = 1 Query: 1 ISRHSEGRWNLLAKRSGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQAR 267 + +H EG WN + K +GL R GKSCRLRW N+L+P++K+G T +E+ I++LHSK GN+W+++A HLPGRTDNEIKNYW TR+++ R Sbjct: 57 VKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKKGAFTAEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWNTRIKRCQR 145
BLAST of CX308963 vs. ExPASy Swiss-Prot
Match: GAM1_ORYSI (Transcription factor GAMYB OS=Oryza sativa subsp. indica GN=GAM1 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 4.403e-28 Identity = 50/89 (56.18%), Postives = 70/89 (78.65%), Query Frame = 1 Query: 1 ISRHSEGRWNLLAKRSGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQAR 267 + +H EG WN + K +GL R GKSCRLRW N+L+P++K+G T +E+ I++LHSK GN+W+++A HLPGRTDNEIKNYW TR+++ R Sbjct: 57 VKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKKGAFTAEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWNTRIKRCQR 145
BLAST of CX308963 vs. ExPASy Swiss-Prot
Match: MYBP_MAIZE (Myb-related protein P OS=Zea mays GN=P PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 7.511e-28 Identity = 53/87 (60.92%), Postives = 67/87 (77.01%), Query Frame = 1 Query: 1 ISRHSEGRWNLLAKRSGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQ 261 I+ H EG W L K +GL R GKSCRLRW+NYL+ DVKRGN++ +E+ I++LH+ GNRWS IA HLPGRTDNEIKNYW + + +Q Sbjct: 29 IAEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQ 115
BLAST of CX308963 vs. ExPASy Swiss-Prot
Match: MYB82_ARATH (Transcription factor MYB82 OS=Arabidopsis thaliana GN=MYB82 PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 9.809e-28 Identity = 52/87 (59.77%), Postives = 67/87 (77.01%), Query Frame = 1 Query: 1 ISRHSEGRWNLLAKRSGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQ 261 + H EG W +++RSGLKR GKSCRLRW NYL+P++KRG+++PQEQ I+ +H GNRWS IA LPGRTDNE+KNYW T + K+ Sbjct: 29 VETHGEGNWADISRRSGLKRGGKSCRLRWKNYLRPNIKRGSMSPQEQDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKK 115
BLAST of CX308963 vs. ExPASy Swiss-Prot
Match: MYB4_ARATH (Transcription repressor MYB4 OS=Arabidopsis thaliana GN=MYB4 PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 9.809e-28 Identity = 56/97 (57.73%), Postives = 69/97 (71.13%), Query Frame = 1 Query: 1 ISRHSEGRWNLLAKRSGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARHLKIDANS 291 I H EG W L K +GL R GKSCRLRW+NYL+PD+KRGN T +E I++LHS GN+WS IA LPGRTDNEIKNYW T ++++ + ID S Sbjct: 29 IKAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLINRGIDPTS 125
BLAST of CX308963 vs. ExPASy Swiss-Prot
Match: MYB23_ARATH (Transcription factor MYB23 OS=Arabidopsis thaliana GN=MYB23 PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 9.809e-28 Identity = 51/87 (58.62%), Postives = 66/87 (75.86%), Query Frame = 1 Query: 1 ISRHSEGRWNLLAKRSGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQ 261 + H +G WN +AK++GLKR GKSCRLRW+NYL P+V RGN T QE+ I+ LH GNRWS IA+ +PGRTDN++KNYW T + K+ Sbjct: 29 VRTHGQGHWNRIAKKTGLKRCGKSCRLRWMNYLSPNVNRGNFTDQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKK 115
BLAST of CX308963 vs. ExPASy Swiss-Prot
Match: MYB6_ARATH (Transcription repressor MYB6 OS=Arabidopsis thaliana GN=MYB6 PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.854e-27 Identity = 56/112 (50.00%), Postives = 73/112 (65.18%), Query Frame = 1 Query: 1 ISRHSEGRWNLLAKRSGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQ--------ARHLKIDANSTTFQEII 312 I H EG W L K +GL R GKSCRLRW+NYL+PD+KRGN T E I++LHS GN+WS IA LPGRTDNEIKNYW T ++++ H +I+ + T +++ Sbjct: 29 IRNHGEGCWRSLPKSAGLLRCGKSCRLRWINYLRPDLKRGNFTDDEDQIIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLSHGIDPQTHRQINESKTVSSQVV 140
BLAST of CX308963 vs. ExPASy Swiss-Prot
Match: MYB5_ARATH (Transcription repressor MYB5 OS=Arabidopsis thaliana GN=MYB5 PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.854e-27 Identity = 56/94 (59.57%), Postives = 66/94 (70.21%), Query Frame = 1 Query: 1 ISRHSEGRWNLLAKRSGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARHLKID 282 I + EGRW L KR+GL R GKSCRLRW+NYL+P VKRG +T E+ IL LH GNRWS IA +PGRTDNEIKNYW T ++K+ ID Sbjct: 40 IKKEGEGRWRSLPKRAGLLRCGKSCRLRWMNYLRPSVKRGGITSDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLRKKLLRQGID 133
BLAST of CX308963 vs. ExPASy Swiss-Prot
Match: MYB4_ORYSJ (Myb-related protein Myb4 OS=Oryza sativa subsp. japonica GN=MYB4 PE=2 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 2.854e-27 Identity = 52/87 (59.77%), Postives = 65/87 (74.71%), Query Frame = 1 Query: 1 ISRHSEGRWNLLAKRSGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQ 261 I RH G W L K++GL R GKSCRLRW+NYL+PD+KRGN + +E+ +I+ LH GNRWS IA LPGRTDNEIKN W T ++K+ Sbjct: 29 IQRHGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEDTIIHLHELLGNRWSAIAARLPGRTDNEIKNVWHTHLKKR 115 The following BLAST results are available for this feature:
BLAST of CX308963 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308963 ID=CX308963; Name=CX308963; organism=Citrus clementina; type=EST; length=604bpback to top |