CX308963
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX308963 vs. ExPASy Swiss-Prot
Match: MYB06_ANTMA (Myb-related protein 306 OS=Antirrhinum majus GN=MYB306 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 7.275e-23 Identity = 46/96 (47.92%), Postives = 61/96 (63.54%), Query Frame = 1 Query: 1 ISRHSEGRWNLLAKRSGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARHLKIDAN 288 I H G W + +GL R KSCRLRW NYL+P +KRG+ T E+ I+ L + GNRW+ IA +LP RTDN+IKNYW T ++K+ L+ N Sbjct: 29 IQEHGPGNWRAIPSNTGLLRCSKSCRLRWTNYLRPGIKRGDFTEHEEKMIIHLQALLGNRWAAIASYLPHRTDNDIKNYWNTHLKKKLEKLQSPEN 124
BLAST of CX308963 vs. ExPASy Swiss-Prot
Match: RAX1_ARATH (Transcription factor RAX1 OS=Arabidopsis thaliana GN=RAX1 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.241e-22 Identity = 46/92 (50.00%), Postives = 65/92 (70.65%), Query Frame = 1 Query: 19 GRWNLLAKRSGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARHLKIDANST 294 G W ++GL+R GKSCRLRWLNYL+P++K G+ + +E I L + G+RWS IA HLPGRTDN+IKNYW T+++K+ D++S+ Sbjct: 36 GNWISFPLKAGLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLPGRTDNDIKNYWNTKLRKKLLSSSSDSSSS 127
BLAST of CX308963 vs. ExPASy Swiss-Prot
Match: RAX3_ARATH (Transcription factor RAX3 OS=Arabidopsis thaliana GN=RAX3 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.764e-22 Identity = 46/81 (56.79%), Postives = 60/81 (74.07%), Query Frame = 1 Query: 19 GRWNLLAKRSGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQ 261 G W L ++ GLKR GKSCRLRWLNYL+P++K G + +E+ I L+ G+RWS IA LPGRTDN+IKNYW TR++K+ Sbjct: 36 GNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEENIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKK 116
BLAST of CX308963 vs. ExPASy Swiss-Prot
Match: LAF1_ARATH (Transcription factor LAF1 OS=Arabidopsis thaliana GN=LAF1 PE=1 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 2.764e-22 Identity = 43/79 (54.43%), Postives = 62/79 (78.48%), Query Frame = 1 Query: 25 WNLLAKRSGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQ 261 W + ++GL+R GKSCRLRW+NYL+P +KR ++ +E+ +IL HS GN+WS+IA+ LPGRTDNEIKNYW + ++K+ Sbjct: 35 WTTVPIKAGLQRNGKSCRLRWINYLRPGLKRDMISAEEEETILTFHSSLGNKWSQIAKFLPGRTDNEIKNYWHSHLKKK 113
BLAST of CX308963 vs. ExPASy Swiss-Prot
Match: RAX2_ARATH (Transcription factor RAX2 OS=Arabidopsis thaliana GN=RAX2 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 6.158e-22 Identity = 44/81 (54.32%), Postives = 60/81 (74.07%), Query Frame = 1 Query: 19 GRWNLLAKRSGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQ 261 G W L ++GL+R GKSCRLRWLNYL+P+++ G+ T +E I L + G+RWS IA HL GRTDN+IKNYW T+++K+ Sbjct: 36 GNWIALPHKAGLRRCGKSCRLRWLNYLRPNIRHGDFTEEEDNIIYSLFASIGSRWSVIAAHLQGRTDNDIKNYWNTKLKKK 116
BLAST of CX308963 vs. ExPASy Swiss-Prot
Match: MY104_ARATH (Transcription factor MYB104 OS=Arabidopsis thaliana GN=MYB104 PE=2 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 9.832e-20 Identity = 38/83 (45.78%), Postives = 58/83 (69.88%), Query Frame = 1 Query: 1 ISRHSEGRWNLLAKRSGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTR 249 + ++ + W + KR+GL SCR RW+N+LKP +K+G T +E+ +L+LH+ GN+WS++A+ PGRTDNEIKN+W R Sbjct: 33 VIQYGDRTWTHVPKRTGLPHNPASCRFRWMNHLKPSLKKGPFTDEEEKRVLQLHAVLGNKWSQMAREFPGRTDNEIKNFWNAR 115
BLAST of CX308963 vs. ExPASy Swiss-Prot
Match: MYB_HUMAN (Myb proto-oncogene protein OS=Homo sapiens GN=MYB PE=1 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 5.395e-18 Identity = 54/163 (33.13%), Postives = 90/163 (55.21%), Query Frame = 1 Query: 1 ISRHSEGRWNLLAKRSGLK-RTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQK---QARHLKIDANSTTFQEIIRCFWMPRLLQKMDTXXXXXXXXXXQNPTINSQPFDHAFHHQGSASAQIISHQVPY 477 + ++ RW+++AK LK R GK CR RW N+L P+VK+ + T +E I + H + GNRW++IA+ LPGRTDN IKN+W + +++ Q +L+ +++ + + F L PT+N+ D++++H + AQ +S VPY Sbjct: 107 VQKYGPKRWSVIAKH--LKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQ-ESSKASQPAVATSFQKNSHLMGFAQAPPTAQLPATGQPTVNN---DYSYYH--ISEAQNVSSHVPY 261
BLAST of CX308963 vs. ExPASy Swiss-Prot
Match: MYB_XENLA (Myb protein OS=Xenopus laevis GN=myb PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 9.203e-18 Identity = 54/152 (35.53%), Postives = 86/152 (56.58%), Query Frame = 1 Query: 1 ISRHSEGRWNLLAKRSGLK-RTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRT---RVQKQARHLKIDANSTTFQEIIRCFWMPRLLQKMDTXXXXXXXXXXQNPTINSQPFDHAFHHQGSA 444 + ++ RW+++AK LK R GK CR RW N+L P+VK+ + T +E +I E H + GNRW++IA+ LPGRTDN IKN+W + R ++Q +L+ +++ T I+ F P+ M T + +S P+ H HQ ++ Sbjct: 104 VHKYGPKRWSVIAKH--LKGRIGKQCRERWHNHLNPEVKKSSWTEEEDRTIYEAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKEEQEGYLQ-NSSKTNQHTIVTNF--PKSNHLM-TFTHTRASAEHSQASTSSFPYYHIAEHQNAS 249
BLAST of CX308963 vs. ExPASy Swiss-Prot
Match: MYB_BOVIN (Myb proto-oncogene protein OS=Bos taurus GN=MYB PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.202e-17 Identity = 54/163 (33.13%), Postives = 89/163 (54.60%), Query Frame = 1 Query: 1 ISRHSEGRWNLLAKRSGLK-RTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQK---QARHLKIDANSTTFQEIIRCFWMPRLLQKMDTXXXXXXXXXXQNPTINSQPFDHAFHHQGSASAQIISHQVPY 477 + ++ RW+++AK LK R GK CR RW N+L P+VK+ + T +E I + H + GNRW++IA+ LPGRTDN IKN+W + +++ Q +L+ +++ + + F L P++NS D+ ++H + AQ +S VPY Sbjct: 107 VQKYGPKRWSVIAKH--LKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQ-ESSKASQPAVTTSFQKNSHLMGFTHAPPSAQLPPAGQPSVNS---DYPYYH--ISEAQNVSSHVPY 261
BLAST of CX308963 vs. ExPASy Swiss-Prot
Match: MYBA_MOUSE (Myb-related protein A OS=Mus musculus GN=Mybl1 PE=2 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.202e-17 Identity = 41/88 (46.59%), Postives = 61/88 (69.32%), Query Frame = 1 Query: 1 ISRHSEGRWNLLAKRSGLK-RTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQ 261 + ++ RW+L+AK LK R GK CR RW N+L P+VK+ + T +E I E H + GNRW++IA+ LPGRTDN IKN+W + ++++ Sbjct: 102 VQKYGPKRWSLIAKH--LKGRIGKQCRERWHNHLNPEVKKSSWTEEEDRIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRK 187 The following BLAST results are available for this feature:
BLAST of CX308963 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX308963 ID=CX308963; Name=CX308963; organism=Citrus clementina; type=EST; length=604bpback to top |