CX308963
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX308963 vs. ExPASy Swiss-Prot
Match: MYB_AVIMB (Transforming protein Myb OS=Avian myeloblastosis virus GN=V-MYB PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 6.595e-16 Identity = 38/88 (43.18%), Postives = 60/88 (68.18%), Query Frame = 1 Query: 1 ISRHSEGRWNLLAKRSGLK-RTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQ 261 + ++ RW+ +AK LK R GK CR RW N+L P+VK+ + T +E I + H + GNRW++IA+ LPGRTDN +KN+W + ++++ Sbjct: 36 VQKYGPKRWSDIAKH--LKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAVKNHWNSTMRRK 121
BLAST of CX308963 vs. ExPASy Swiss-Prot
Match: RS2_ORYSJ (Protein rough sheath 2 homolog OS=Oryza sativa subsp. japonica GN=RS2 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 8.613e-16 Identity = 37/94 (39.36%), Postives = 57/94 (60.64%), Query Frame = 1 Query: 1 ISRHSEGRWNLLAKRSG--LKRTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARHLK 276 + ++ W+L+++R L R KSC RW NYL+P +K+G+LT EQ ++ L +K GN+W KIA +PGRT + +W +KQ R L+ Sbjct: 24 VRQYGPREWSLVSQRMNRPLHRDAKSCLERWKNYLRPGIKKGSLTDDEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQRELR 117
BLAST of CX308963 vs. ExPASy Swiss-Prot
Match: AS1_ARATH (Transcription factor AS1 OS=Arabidopsis thaliana GN=AS1 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.125e-15 Identity = 38/86 (44.19%), Postives = 53/86 (61.63%), Query Frame = 1 Query: 25 WNLLAKRSG--LKRTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARHLK 276 W+L+++R L R KSC RW NYLKP +K+G+LT +EQ ++ L K GN+W KIA +PGRT + +W +KQ R K Sbjct: 27 WHLVSERMNKPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQRLVIRLQEKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREEK 112
BLAST of CX308963 vs. ExPASy Swiss-Prot
Match: MYBAA_DICDI (Myb-like protein AA OS=Dictyostelium discoideum GN=mybAA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 5.583e-15 Identity = 38/97 (39.18%), Postives = 59/97 (60.82%), Query Frame = 1 Query: 1 ISRHSEGRWNLLAKRSGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARHLKIDANS 291 + H RW +A L R G+ CR RW N L P +KR T +E IL+ HSK+GN+W++I++ LPGRT+ IKN+W + ++++ + D +S Sbjct: 772 VDLHGTKRWKYIASLLCL-RNGRQCRERWSNQLDPSIKRDAWTLEEDRIILDAHSKYGNKWAEISKLLPGRTNCAIKNHWNSTMKRKLSKKQYDFSS 867
BLAST of CX308963 vs. ExPASy Swiss-Prot
Match: MYB_DROME (Myb protein OS=Drosophila melanogaster GN=Myb PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.244e-14 Identity = 35/80 (43.75%), Postives = 54/80 (67.50%), Query Frame = 1 Query: 22 RWNLLAKRSGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQ 261 +W L+A+ R GK CR RW N+L P++K+ T +E I + H + GN+W+KIA+ LPGRTDN IKN+W + ++++ Sbjct: 158 KWTLIARYLN-GRIGKQCRERWHNHLNPNIKKTAWTEKEDEIIYQAHLELGNQWAKIAKRLPGRTDNAIKNHWNSTMRRK 236
BLAST of CX308963 vs. ExPASy Swiss-Prot
Match: MYB98_ARATH (Transcription factor MYB98 OS=Arabidopsis thaliana GN=MYB98 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.244e-14 Identity = 31/68 (45.59%), Postives = 48/68 (70.59%), Query Frame = 1 Query: 58 RTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQ 261 R GK CR RW N+L+PD+K+ + +E ++E H + GN+W++IA+ LPGRT+N IKN+W ++Q Sbjct: 250 RIGKQCRERWHNHLRPDIKKETWSEEEDRVLIEFHKEIGNKWAEIAKRLPGRTENSIKNHWNATKRRQ 317
BLAST of CX308963 vs. ExPASy Swiss-Prot
Match: MB3R1_ARATH (Myb-related protein 3R-1 OS=Arabidopsis thaliana GN=MYB3R-1 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 6.173e-14 Identity = 29/87 (33.33%), Postives = 57/87 (65.52%), Query Frame = 1 Query: 1 ISRHSEGRWNLLAKRSGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQ 261 + ++ +W+ +++ R GK CR RW N+L P + + T +E+++++ H +GN+W+++ + LPGR+DN IKN+W + V+K+ Sbjct: 102 VEKYGPKKWSTISQHLP-GRIGKQCRERWHNHLNPGINKNAWTQEEELTLIRAHQIYGNKWAELMKFLPGRSDNSIKNHWNSSVKKK 187
BLAST of CX308963 vs. ExPASy Swiss-Prot
Match: MYB44_ARATH (Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.053e-13 Identity = 33/87 (37.93%), Postives = 57/87 (65.52%), Query Frame = 1 Query: 1 ISRHSEGRWNLLAKRSGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQ 261 + ++ W +++K S R+GKSCRLRW N L P V+ + +E +I H+++GN+W+ IA+ L GRTDN +KN+W + ++++ Sbjct: 21 VVKYGPRNWTVISK-SIPGRSGKSCRLRWCNQLSPQVEHRPFSAEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106
BLAST of CX308963 vs. ExPASy Swiss-Prot
Match: MYBA_DICDI (Myb-like protein A OS=Dictyostelium discoideum GN=mybA PE=4 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 2.346e-13 Identity = 36/79 (45.57%), Postives = 50/79 (63.29%), Query Frame = 1 Query: 58 RTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRT---RVQKQARHLKIDA 285 R GK CR RW N+L P++K+ + +E I + H+ GN+W++IA+ LPGRTDN IKN+W + RV HLK A Sbjct: 234 RMGKQCRERWHNHLNPNIKKEAWSDEEDQIIRDQHAIHGNKWAEIAKFLPGRTDNAIKNHWNSSMKRVSNNNVHLKSHA 312
BLAST of CX308963 vs. ExPASy Swiss-Prot
Match: MYBQ_DICDI (Myb-like protein Q OS=Dictyostelium discoideum GN=mybQ PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.226e-13 Identity = 30/68 (44.12%), Postives = 46/68 (67.65%), Query Frame = 1 Query: 58 RTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQ 261 R GK CR RW N+L P+V++ N TP+E I++ H+ GN+W+ I++ L GR N IKN+W + + K+ Sbjct: 310 RIGKQCRERWFNHLSPEVRKTNWTPEEDKIIIDAHASLGNKWTAISKMLDGRPANAIKNHWNSTLLKK 377 The following BLAST results are available for this feature:
BLAST of CX308963 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308963 ID=CX308963; Name=CX308963; organism=Citrus clementina; type=EST; length=604bpback to top |