CX308988
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX308988 vs. ExPASy Swiss-Prot
Match: AROC_RHISN (Chorismate synthase OS=Rhizobium sp. (strain NGR234) GN=aroC PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.716e-18 Identity = 44/82 (53.66%), Postives = 58/82 (70.73%), Query Frame = -1 Query: 10 FGTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGV---SEG---VTTGTPI 237 FG FRVTT+GESHG +GC++DGCPP I + A++Q LD+R+PGQSR T R+E D K+ SGV +G ++TGTPI Sbjct: 6 FGHLFRVTTWGESHGPALGCVVDGCPPGIRFTLAEIQAWLDKRKPGQSRFVTQRREDDLVKVLSGVMLDDDGETMISTGTPI 87
BLAST of CX308988 vs. ExPASy Swiss-Prot
Match: AROC_RHIME (Chorismate synthase OS=Rhizobium meliloti GN=aroC PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.716e-18 Identity = 44/82 (53.66%), Postives = 58/82 (70.73%), Query Frame = -1 Query: 10 FGTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGV---SEG---VTTGTPI 237 FG FRVTT+GESHG +GC++DGCPP I + A++Q LD+R+PGQSR T R+E D K+ SGV +G ++TGTPI Sbjct: 6 FGHLFRVTTWGESHGPALGCVVDGCPPGIRFTLAEVQAWLDKRKPGQSRFVTQRREDDLVKVLSGVMLDDDGETMISTGTPI 87
BLAST of CX308988 vs. ExPASy Swiss-Prot
Match: AROC_BARHE (Chorismate synthase OS=Bartonella henselae GN=aroC PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.716e-18 Identity = 46/82 (56.10%), Postives = 59/82 (71.95%), Query Frame = -1 Query: 10 FGTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGV---SEG---VTTGTPI 237 FG FRVTT+GESHG +GC+IDGCPP I + +D+Q L++R+PGQS+ TT R+E D +I SGV +G VTTGTPI Sbjct: 6 FGHLFRVTTWGESHGEALGCVIDGCPPGITFTLSDIQSYLNKRKPGQSKYTTQRRELDQVEILSGVIVQDDGITFVTTGTPI 87
BLAST of CX308988 vs. ExPASy Swiss-Prot
Match: AROC_AGRVS (Chorismate synthase OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=aroC PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.853e-18 Identity = 43/81 (53.09%), Postives = 55/81 (67.90%), Query Frame = -1 Query: 10 FGTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGV-----SEGVTTGTPI 237 FG FRVTT+GESHG +G ++DGCPP + + D+QV LD+R+PGQSR T R+E D K+ SGV +TTGTPI Sbjct: 6 FGHLFRVTTWGESHGPALGAVVDGCPPGLKFTLEDLQVWLDKRKPGQSRFVTQRREDDLVKVLSGVMPQDDGSMITTGTPI 86
BLAST of CX308988 vs. ExPASy Swiss-Prot
Match: AROC_SULMW (Chorismate synthase OS=Sulcia muelleri (strain GWSS) GN=aroC PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.339e-18 Identity = 43/76 (56.58%), Postives = 54/76 (71.05%), Query Frame = -1 Query: 10 FGTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPI 237 FG FRVTTFGESHG +G IIDGCP + L+ ++ +L+RR+PGQS I T RKE+D SG+ G+TTGTPI Sbjct: 6 FGKLFRVTTFGESHGYALGGIIDGCPSGLKLNFEEINNELNRRKPGQSSIVTQRKESDEVIFLSGIFNGLTTGTPI 81
BLAST of CX308988 vs. ExPASy Swiss-Prot
Match: AROC_PSEMY (Chorismate synthase OS=Pseudomonas mendocina (strain ymp) GN=aroC PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.339e-18 Identity = 45/76 (59.21%), Postives = 52/76 (68.42%), Query Frame = -1 Query: 10 FGTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPI 237 +G F VTT GESHG + I+DGCPP + LS DMQ DLDRR+PG SR TT R+E D +I SGV EG TTG I Sbjct: 6 YGKLFTVTTAGESHGPALVAIVDGCPPGLELSLEDMQRDLDRRKPGTSRHTTQRQEDDVVEILSGVFEGKTTGCAI 81
BLAST of CX308988 vs. ExPASy Swiss-Prot
Match: AROC_HELHP (Chorismate synthase OS=Helicobacter hepaticus GN=aroC PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.339e-18 Identity = 41/76 (53.95%), Postives = 56/76 (73.68%), Query Frame = -1 Query: 10 FGTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPI 237 FG FRV+TFGESHG G+GC+IDG P + + E ++ + RR PG+++ TT RKE+D +I SGV EG++TGTPI Sbjct: 4 FGKSFRVSTFGESHGEGIGCVIDGIPAGLHIDELFIESMMTRRAPGRNQYTTQRKESDKVQILSGVFEGLSTGTPI 79
BLAST of CX308988 vs. ExPASy Swiss-Prot
Match: AROC_SULDN (Chorismate synthase OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=aroC PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.279e-18 Identity = 40/76 (52.63%), Postives = 54/76 (71.05%), Query Frame = -1 Query: 10 FGTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPI 237 FG F+++TFGESHG +GC++DG P + + E +Q +LDRR+PG+S T RKE D +I SGV EG +TGTPI Sbjct: 4 FGIKFKISTFGESHGVAIGCLLDGVPAGLLIDEEFIQAELDRRKPGKSEFETARKEDDKVEILSGVFEGKSTGTPI 79
BLAST of CX308988 vs. ExPASy Swiss-Prot
Match: AROC_PSYWF (Chorismate synthase OS=Psychrobacter sp. (strain PRwf-1) GN=aroC PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.279e-18 Identity = 42/75 (56.00%), Postives = 53/75 (70.67%), Query Frame = -1 Query: 10 GTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPI 234 G F+VTT GESHG G+ I+DG P +PL+ D+Q+DLDRR+PG S+ T R+E D +I SGV EG TTGT I Sbjct: 7 GQAFKVTTCGESHGAGLMAIVDGVPSGLPLTSEDLQLDLDRRKPGTSKFATQRREPDEVEIISGVFEGKTTGTSI 81
BLAST of CX308988 vs. ExPASy Swiss-Prot
Match: AROC_PSEPK (Chorismate synthase OS=Pseudomonas putida (strain KT2440) GN=aroC PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.279e-18 Identity = 44/76 (57.89%), Postives = 53/76 (69.74%), Query Frame = -1 Query: 10 FGTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPI 237 +G F VTT GESHG + I+DGCPP + +S AD+Q DLDRR+PG SR TT R+E D +I SGV EG TTG I Sbjct: 6 YGKLFTVTTAGESHGPALVAIVDGCPPGLEISLADLQHDLDRRKPGTSRHTTQRQEADEVEILSGVFEGRTTGCSI 81 The following BLAST results are available for this feature:
BLAST of CX308988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 499
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308988 ID=CX308988; Name=CX308988; organism=Citrus clementina; type=EST; length=237bpback to top |