CX308988
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX308988 vs. ExPASy Swiss-Prot
Match: AROC_PSEF5 (Chorismate synthase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=aroC PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.109e-17 Identity = 43/76 (56.58%), Postives = 52/76 (68.42%), Query Frame = -1 Query: 10 FGTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPI 237 +G F VTT GESHG + I+DGCPP + L+ D+Q DLDRR+PG SR TT R+E D +I SGV EG TTG I Sbjct: 6 YGKLFTVTTAGESHGPALVAIVDGCPPGLELTLEDLQRDLDRRKPGTSRHTTQRQEPDEVEILSGVFEGKTTGCSI 81
BLAST of CX308988 vs. ExPASy Swiss-Prot
Match: AROC_ARCFU (Chorismate synthase OS=Archaeoglobus fulgidus GN=aroC PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.366e-17 Identity = 42/76 (55.26%), Postives = 55/76 (72.37%), Query Frame = -1 Query: 10 FGTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPI 237 FG + RVTT+GESHG VGC+IDG P + + E +Q +++RRRPG+ + TT RKE D +I SGV EG+TT TPI Sbjct: 4 FGHFLRVTTWGESHGRAVGCVIDGFPAGLEVDEEFIQREMERRRPGK-KYTTQRKEVDRVEILSGVFEGLTTATPI 78
BLAST of CX308988 vs. ExPASy Swiss-Prot
Match: AROC_HALLT (Chorismate synthase OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=aroC PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 7.008e-17 Identity = 41/76 (53.95%), Postives = 50/76 (65.79%), Query Frame = -1 Query: 10 FGTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPI 237 FG F+VTT+GESHG +G + G P + L E +Q LDRR+PGQS ITT R E D + SGV +G TTGTPI Sbjct: 6 FGRLFQVTTYGESHGEAMGVTVSGVPAGVELDEEAIQAQLDRRKPGQSMITTSRGEPDEVVVNSGVQDGYTTGTPI 81
BLAST of CX308988 vs. ExPASy Swiss-Prot
Match: AROC_RUTMC (Chorismate synthase OS=Ruthia magnifica subsp. Calyptogena magnifica GN=aroC PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.153e-17 Identity = 43/75 (57.33%), Postives = 51/75 (68.00%), Query Frame = -1 Query: 10 GTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPI 234 G F +TT GESHG + I+DGCPPR+ L+EAD+Q DLD R+PG S T+ R E D KI SG EG TTGT I Sbjct: 7 GKLFTITTAGESHGEALIGIVDGCPPRLALTEADLQGDLDLRKPGTSCHTSQRHEEDLVKILSGTFEGKTTGTTI 81
BLAST of CX308988 vs. ExPASy Swiss-Prot
Match: AROC_METST (Chorismate synthase OS=Methanosphaera stadtmanae (strain DSM 3091) GN=aroC PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.561e-16 Identity = 40/75 (53.33%), Postives = 51/75 (68.00%), Query Frame = -1 Query: 10 GTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPI 234 G F+VTTFG SHG +G IDGCP + LS D+Q +L++RRPG S +TT R E D +I SG+ G+T GTPI Sbjct: 7 GEIFKVTTFGLSHGKALGATIDGCPAGLNLSNEDIQNELNKRRPGTSNLTTSRDEKDKVEILSGIFNGMTDGTPI 81
BLAST of CX308988 vs. ExPASy Swiss-Prot
Match: AROC_CHLMU (Chorismate synthase OS=Chlamydia muridarum GN=aroC PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.663e-16 Identity = 40/76 (52.63%), Postives = 53/76 (69.74%), Query Frame = -1 Query: 10 FGTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPI 237 +G+ F +TT+GESHG +G +IDGCP +PL+ D + RRRPGQ T+PR+ETD+ I SGV + TTGTPI Sbjct: 5 YGSLFSITTWGESHGPSIGVVIDGCPAGLPLAPEDFLPAMKRRRPGQLH-TSPRQETDSVTILSGVYQQKTTGTPI 79
BLAST of CX308988 vs. ExPASy Swiss-Prot
Match: AROC_CAMJR (Chorismate synthase OS=Campylobacter jejuni (strain RM1221) GN=aroC PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.663e-16 Identity = 41/78 (52.56%), Postives = 53/78 (67.95%), Query Frame = -1 Query: 4 FGTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPIHV 237 FGT + T+FGESHG VGCIIDG P + E +Q +LD+R+ G S+ TPRKE+D ++ SGV EG TTG PI + Sbjct: 4 FGTRLKFTSFGESHGVAVGCIIDGMPAGVKFDEEFLQNELDKRK-GGSKFATPRKESDKAQVLSGVFEGYTTGHPIAI 80
BLAST of CX308988 vs. ExPASy Swiss-Prot
Match: AROC_CAMJJ (Chorismate synthase OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=aroC PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.663e-16 Identity = 41/78 (52.56%), Postives = 53/78 (67.95%), Query Frame = -1 Query: 4 FGTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPIHV 237 FGT + T+FGESHG VGCIIDG P + E +Q +LD+R+ G S+ TPRKE+D ++ SGV EG TTG PI + Sbjct: 4 FGTRLKFTSFGESHGVAVGCIIDGMPAGVKFDEEFLQNELDKRK-GGSKFATPRKESDKAQVLSGVFEGYTTGHPIAI 80
BLAST of CX308988 vs. ExPASy Swiss-Prot
Match: AROC_CAMJE (Chorismate synthase OS=Campylobacter jejuni GN=aroC PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.663e-16 Identity = 41/78 (52.56%), Postives = 53/78 (67.95%), Query Frame = -1 Query: 4 FGTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPIHV 237 FGT + T+FGESHG VGCIIDG P + E +Q +LD+R+ G S+ TPRKE+D ++ SGV EG TTG PI + Sbjct: 4 FGTRLKFTSFGESHGVAVGCIIDGMPAGVKFDEEFLQNELDKRK-GGSKFATPRKESDKAQVLSGVFEGYTTGHPIAI 80
BLAST of CX308988 vs. ExPASy Swiss-Prot
Match: AROC_CAMJD (Chorismate synthase OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=aroC PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.663e-16 Identity = 41/78 (52.56%), Postives = 53/78 (67.95%), Query Frame = -1 Query: 4 FGTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPIHV 237 FGT + T+FGESHG VGCIIDG P + E +Q +LD+R+ G S+ TPRKE+D ++ SGV EG TTG PI + Sbjct: 4 FGTRLKFTSFGESHGVAVGCIIDGMPAGVKFDEEFLQNELDKRK-GGSKFATPRKESDKAQVLSGVFEGYTTGHPIAI 80 The following BLAST results are available for this feature:
BLAST of CX308988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 499
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX308988 ID=CX308988; Name=CX308988; organism=Citrus clementina; type=EST; length=237bpback to top |