CX308988
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308988 vs. ExPASy Swiss-Prot
Match: AROC_HELPH (Chorismate synthase OS=Helicobacter pylori (strain HPAG1) GN=aroC PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.140e-13 Identity = 35/75 (46.67%), Postives = 50/75 (66.67%), Query Frame = -1 Query: 10 GTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPI 234 G + R+TTFGESHG +G ++DG P I + A ++ ++ RR+ G++ TPRKE D +I SGV E +TGTPI Sbjct: 5 GCFLRLTTFGESHGDMIGGVLDGMPSGIKIDYALLENEMKRRQGGRNVFITPRKEDDKVEITSGVFEDFSTGTPI 79
BLAST of CX308988 vs. ExPASy Swiss-Prot
Match: AROC_HELP2 (Chorismate synthase OS=Helicobacter pylori (strain P12) GN=aroC PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.140e-13 Identity = 35/75 (46.67%), Postives = 50/75 (66.67%), Query Frame = -1 Query: 10 GTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPI 234 G + R+TTFGESHG +G ++DG P I + A ++ ++ RR+ G++ TPRKE D +I SGV E +TGTPI Sbjct: 5 GRFLRLTTFGESHGDVIGGVLDGMPSGIKIDYALLENEMKRRQGGRNVFITPRKEDDKVEITSGVFEDFSTGTPI 79
BLAST of CX308988 vs. ExPASy Swiss-Prot
Match: AROC_SULAC (Chorismate synthase OS=Sulfolobus acidocaldarius GN=aroC PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.368e-12 Identity = 35/77 (45.45%), Postives = 51/77 (66.23%), Query Frame = -1 Query: 4 GTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPIHV 234 G FR+TTFGESHG +G I+DG P + +S+ D++ +L RRPG+ + + R+E D +I SGV G TTG P+ + Sbjct: 7 GKMFRITTFGESHGPMIGVIVDGVPAGLYISKEDIEFELSFRRPGK-QFVSGRREKDEPEIVSGVYNGRTTGAPLTI 82
BLAST of CX308988 vs. ExPASy Swiss-Prot
Match: AROC_PYRKO (Chorismate synthase OS=Pyrococcus kodakaraensis GN=aroC PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.786e-12 Identity = 37/77 (48.05%), Postives = 49/77 (63.64%), Query Frame = -1 Query: 4 GTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPIHV 234 G + FGESHG VG +++G PP I +S +++ +L+RR+ G R T RKETD KI SGV G TTGTP+ V Sbjct: 3 GKLLSFSLFGESHGKAVGVLVEGLPPGIEVSVEELKRELERRK-GIERFATKRKETDEPKILSGVFRGRTTGTPVAV 78
BLAST of CX308988 vs. ExPASy Swiss-Prot
Match: AROC_DEHE1 (Chorismate synthase OS=Dehalococcoides ethenogenes (strain 195) GN=aroC PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.047e-12 Identity = 32/75 (42.67%), Postives = 48/75 (64.00%), Query Frame = -1 Query: 10 GTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPI 234 G F++T+FGESHG VG +IDG P + ++ ++QV++D+R+ TPR E D +I+SG+ TTG PI Sbjct: 6 GKLFQITSFGESHGDCVGVVIDGVPAGLAINVDEIQVEVDKRKSRAKAHATPRCEDDRIEIFSGILNNFTTGAPI 80
BLAST of CX308988 vs. ExPASy Swiss-Prot
Match: AROC_THEGJ (Chorismate synthase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=aroC PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.788e-12 Identity = 36/77 (46.75%), Postives = 48/77 (62.34%), Query Frame = -1 Query: 4 GTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPIHV 234 G T FGESHG VG +I+G PP I + +M+ +L+RR+ G R +T R+E+D I SGV G TTGTP+ V Sbjct: 3 GKLLSFTLFGESHGKAVGILIEGLPPGIEVKVEEMKAELERRK-GIRRFSTKRRESDEPVIVSGVFNGFTTGTPVTV 78
BLAST of CX308988 vs. ExPASy Swiss-Prot
Match: AROC_PYRAB (Chorismate synthase OS=Pyrococcus abyssi GN=aroC PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.400e-11 Identity = 36/77 (46.75%), Postives = 46/77 (59.74%), Query Frame = -1 Query: 4 GTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPIHV 234 G T FGESHG GVG +I G PP I +S ++ +L+RR+ G ++T R E D I SG+ G TTGTPI V Sbjct: 3 GRVLSFTLFGESHGKGVGVVITGIPPGIKVSHEELVKELERRK-GIPGLSTARSEPDNPIILSGIFRGYTTGTPIAV 78
BLAST of CX308988 vs. ExPASy Swiss-Prot
Match: AROC_THEAC (Chorismate synthase OS=Thermoplasma acidophilum GN=aroC PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.802e-11 Identity = 33/75 (44.00%), Postives = 46/75 (61.33%), Query Frame = -1 Query: 10 GTYFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPI 234 G+ ++T FG SHG VG IIDG P + +Q ++ RRPG S +T+ RKE D +I SG+ EG T G+P+ Sbjct: 5 GSSMKMTVFGSSHGEAVGSIIDGFPIGFKIPLDYVQKYMEYRRPGSSILTSQRKEDDEVEIISGLHEGYTDGSPL 79
BLAST of CX308988 vs. ExPASy Swiss-Prot
Match: AROC_AQUAE (Chorismate synthase OS=Aquifex aeolicus GN=aroC PE=1 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.802e-11 Identity = 34/76 (44.74%), Postives = 46/76 (60.53%), Query Frame = -1 Query: 1 YFRVTTFGESHGGGVGCIIDGCPPRIPLSEADMQVDLDRRRPGQSRITTPRKETDTCKIYSGVSEGVTTGTPIHVF 228 Y R T GESHG G+ I++G P +PLSE ++ +L RR+ G R + E DT +I SGV G T G+PI +F Sbjct: 5 YLRFLTAGESHGKGLTAILEGIPANLPLSEEEINHELRRRQRGYGRGGRMKIEKDTAEILSGVRFGKTLGSPIALF 80 The following BLAST results are available for this feature:
BLAST of CX308988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 499
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308988 ID=CX308988; Name=CX308988; organism=Citrus clementina; type=EST; length=237bpback to top |