CX309002
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX309002 vs. ExPASy Swiss-Prot
Match: MUG89_SCHPO (Meiotically up-regulated gene 89 protein OS=Schizosaccharomyces pombe GN=mug89 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 8.688e-18 Identity = 58/144 (40.28%), Postives = 78/144 (54.17%), Query Frame = -3 Query: 72 QLDNFYQNHRRYVKSRNDEQLKKRSKTSET---SQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSR---NKRQLTVNKNGIAWKSDRDHKFGKEVFPSNF---QNGTL-IGGAHLNESIP-LSKQEDLIVWMRTAALPTFRKL 470 +L NF+QNHRRY KS +++QL+ + T++ C P + D KP PCGLIA SLFNDT++ R + T + IAW SD+ P + N L + ++P LS E+L VWMRTA LPTF KL Sbjct: 153 RLTNFFQNHRRYAKSVDEKQLQGVALTADEVKGGNCFPLEVNEDDKPYYPCGLIANSLFNDTFSSLRLLDDNSVYTFSTKNIAWASDKRRFLKTNYSPDDVAPPPNWVLRYPDGYTESNMPDLSTMENLQVWMRTAGLPTFSKL 296
BLAST of CX309002 vs. ExPASy Swiss-Prot
Match: CC50B_HUMAN (Cell cycle control protein 50B OS=Homo sapiens GN=TMEM30B PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.936e-17 Identity = 56/159 (35.22%), Postives = 83/159 (52.20%), Query Frame = -3 Query: 60 QLDNFYQNHRRYVKSRNDEQLK--KRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKR------QLTVNKNGIAWKSDRDHKFGKEVF--------------PSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGKI 470 +L NFYQN+RRY SR+D QL + ++C P + G PI PCG IA SLFND+++ ++ ++ ++++GIAW +D KF P N++ N + ++ +D +VWMRTAALPTFRKLY +I Sbjct: 113 ELTNFYQNNRRYGVSRDDAQLSGLPSALRHPVNECAPYQRSAAGLPIAPCGAIANSLFNDSFSLWHQRQPGGPYVEVPLDRSGIAWWTDYHVKFRNPPLVNGSLALAFQGTAPPPNWRRPVYELSPDPNNTGFIN--QDFVVWMRTAALPTFRKLYARI 269
BLAST of CX309002 vs. ExPASy Swiss-Prot
Match: CC50B_MOUSE (Cell cycle control protein 50B OS=Mus musculus GN=Tmem30b PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 2.528e-17 Identity = 57/166 (34.34%), Postives = 83/166 (50.00%), Query Frame = -3 Query: 60 QLDNFYQNHRRYVKSRNDEQLKKRSKTSE--TSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKR------QLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHL----------NESIPLSK-----------QEDLIVWMRTAALPTFRKLYGKI 470 +L NFYQN+RRY SR+D QL + ++C P DG PI PCG IA SLFND+++ ++ ++ +++ IAW +D + F+N L+ G+ N P+ + +D +VWMRTAALPTFRKLY +I Sbjct: 113 ELSNFYQNNRRYGVSRDDAQLSGLASALRHPANECAPYQFRSDGLPIAPCGAIANSLFNDSFSLWHQRQPSDPFVEVPLDRTAIAWWTD---------YHVKFRNPPLVNGSLALAFRGTAPPPNWHRPVYELSPDPNNTGFINQDFVVWMRTAALPTFRKLYARI 269
BLAST of CX309002 vs. ExPASy Swiss-Prot
Match: CC50C_MOUSE (Cell cycle control protein 50C OS=Mus musculus GN=Tmem30c PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 9.606e-17 Identity = 55/155 (35.48%), Postives = 83/155 (53.55%), Query Frame = -3 Query: 57 QLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLT-----VNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSK------------QEDLIVWMRTAALPTFRKLYGKIE 470 +L FYQN +Y+ SR++ QL + +T+ C+P + + PI+PCG IA S+FNDT T S N T + K+G+ W +D+ KF + SNF + L+ + P+ + ED IVWMRTAA PTF+ LY +++ Sbjct: 109 KLYGFYQNLYQYILSRSNSQLVGKD-IWDTTNCDPFQVSHNDTPIIPCGAIANSIFNDTITLSYNLNSSTQIEVPMLKSGLTWWTDKYVKF-RNPRSSNFTSTFAGSSKPLHWAKPIYELDLDDPENNAFLNEDFIVWMRTAAFPTFKTLYRRLK 261
BLAST of CX309002 vs. ExPASy Swiss-Prot
Match: YNI7_SCHPO (Uncharacterized protein C11B10.07c OS=Schizosaccharomyces pombe GN=SPBC11B10.07c PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 8.132e-16 Identity = 54/153 (35.29%), Postives = 79/153 (51.63%), Query Frame = -3 Query: 72 QLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQ----CEPEDTTPDGKPIVPCGLIAWSLFNDTYT---------FSRNKRQLTVNKNGIAWKSDRD------HKFGKEVFPSNFQNGTLIGGAHLNESIP-LSKQEDLIVWMRTAALPTFRKL 470 +L NFYQNHRRY S + QL ++T + C+P + +GKP PCG+IA SLFND+Y+ S + + NG AW DR+ + + V P N+ + + +++IP +S + +WMR AALPTF KL Sbjct: 130 RLKNFYQNHRRYTVSADMFQLLGEARTVAQLKSYGFCKPLEANEEGKPYYPCGIIANSLFNDSYSSLLRYESFDSSNSLGLYNMTTNGTAWPEDRERYKKTKYNASQIVPPPNW--AKMFPNGYTDDNIPDVSTWDAFQIWMRAAALPTFSKL 280
BLAST of CX309002 vs. ExPASy Swiss-Prot
Match: YN8S_YEAST (Uncharacterized protein YNR048W OS=Saccharomyces cerevisiae GN=YNR048W PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 8.132e-16 Identity = 61/169 (36.09%), Postives = 86/169 (50.89%), Query Frame = -3 Query: 6 QLDNFYQNHRRYVKSRNDEQLKKRSKTSET--SQCEPEDTTPDGKPIVPCGLIAWSLFNDTY----TFSRNKRQLTVNKNGIAWKSDRDHKFGKEVF-------PSNFQNGTLIGGAHLNESIP-LSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILENNY 470 +L NF QN+R YV+S + +QLK ++ C+P T + K I PCGLIA S+FNDT+ T + + GIAW +D H++GK + P N+ L + +++IP L E +WMRTAALP F KL K E + I +E NY Sbjct: 145 RLTNFNQNYREYVQSLDLDQLKGKALIGNDLDPNCDPLRTV-ENKTIFPCGLIANSMFNDTFGTTLTGVNDTADYLLTTKGIAWDTD-SHRYGKTEYNASDIVPPPNW--AKLFPNGYTDDNIPDLQNWEQFKIWMRTAALPNFYKLAMKNETNGLGKGIYIADIELNY 309
BLAST of CX309002 vs. ExPASy Swiss-Prot
Match: CC50C_MACFA (Cell cycle control protein 50C OS=Macaca fascicularis GN=TMEM30C PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.366e-15 Identity = 56/156 (35.90%), Postives = 79/156 (50.64%), Query Frame = -3 Query: 60 QLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRN-----KRQLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIP-----LSKQE---------DLIVWMRTAALPTFRKLYGKI 470 +L FYQN RYV+SR++ QL + C P + + PIVPCG IA S+FNDT S N + ++ + K+G+ W +D+ KF PS+ G + P L K++ D IVWMR AA PTF+KLYG++ Sbjct: 109 KLYGFYQNLYRYVRSRSNRQLVGKD-VKAVEDCAPFKMSDNKTPIVPCGAIANSMFNDTIILSHNINSSVQIKVPMLKSGLTWWTDKYVKFQN---PSSKNLADEFRGTTKPPNWPKPIYDLDKKDPRNNGFLNDDFIVWMRAAAFPTFKKLYGRL 260
BLAST of CX309002 vs. ExPASy Swiss-Prot
Match: CC50C_BOVIN (Cell cycle control protein 50C OS=Bos taurus GN=TMEM30C PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 5.828e-14 Identity = 54/155 (34.84%), Postives = 80/155 (51.61%), Query Frame = -3 Query: 60 QLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDT----YTFSRNKR-QLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGA----------HLNESIPLSK---QEDLIVWMRTAALPTFRKLYGKI 470 +L FYQN RY+ SR++ QL + + C P T+ +G PI PCG IA S+FNDT Y F+ + ++ + + AW +D+ KF F + + G A L+E+ P + +D IVWMRTAA P F+KLY ++ Sbjct: 109 KLYGFYQNLYRYILSRSNIQLVG-ADVKDVRNCAPFRTSDNGLPIAPCGAIANSMFNDTIVLWYNFNSSTHIRVPMVRTETAWWTDKYVKFQNPAFQN--LSSAFAGTAKPPNWPKPVYELDENDPGNNGFINDDFIVWMRTAAFPNFKKLYRRL 260
BLAST of CX309002 vs. ExPASy Swiss-Prot
Match: CDC50_YEAST (Cell division control protein 50 OS=Saccharomyces cerevisiae GN=CDC50 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.448e-12 Identity = 54/152 (35.53%), Postives = 78/152 (51.32%), Query Frame = -3 Query: 57 QLDNFYQNHRRYVKSRNDEQL--KKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTY----TFSRNKRQLTVNKNGIAWKSDRDHKFGKEVF-------PSNFQNGTLIGGAHLNESIP-LSKQEDLIVWMRTAALPTFRKLYGKIE 470 ++ NFYQNHRRYV+S + +Q+ + K + C P + D K I PCGLIA S+FNDT+ + + + I+W DR H+F + P N+ G + +E++P + E+ VWMRTAA P F KL K E Sbjct: 142 KITNFYQNHRRYVQSFDTKQILGEPIKKDDLDTSCSPIRSRED-KIIYPCGLIANSMFNDTFSQVLSGIDDTEDYNLTNKHISWSIDR-HRFKTTKYNASDIVPPPNWMKKYPDG--YTDENLPDIHTWEEFQVWMRTAAFPKFYKLTLKNE 289 The following BLAST results are available for this feature:
BLAST of CX309002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CX309002 ID=CX309002; Name=CX309002; organism=Citrus clementina; type=EST; length=472bpback to top |