CX309020
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_PROM3 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9303) GN=ndk PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.779e-13 Identity = 35/62 (56.45%), Postives = 44/62 (70.97%), Query Frame = 1 Query: 139 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 +E+TF+ IKPDGVQRGLVGEI+ RFE+KGF L GLK + R A +HY +PFF L+ Sbjct: 3 VERTFVAIKPDGVQRGLVGEILGRFERKGFKLVGLKQLAPSRELAGEHYGVHRERPFFAGLV 64
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_METMA (Nucleoside diphosphate kinase OS=Methanosarcina mazei GN=ndk PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.779e-13 Identity = 32/62 (51.61%), Postives = 47/62 (75.81%), Query Frame = 1 Query: 139 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 MEQT++M+KPDGVQRGLVGE+I R EK+G + L++ + A++HY + +++PFF SLI Sbjct: 1 MEQTYVMVKPDGVQRGLVGEVISRIEKRGLKIVALRMNVIAEATAKEHYGEHAARPFFPSLI 62
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_METAC (Nucleoside diphosphate kinase OS=Methanosarcina acetivorans GN=ndk PE=3 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 2.779e-13 Identity = 32/62 (51.61%), Postives = 47/62 (75.81%), Query Frame = 1 Query: 139 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 MEQT++M+KPDGVQRGLVGE+I R EK+G + L++ + A++HY + +++PFF SLI Sbjct: 1 MEQTYVMVKPDGVQRGLVGEVISRIEKRGLKILALRMNVIAEATAKEHYGEHAARPFFPSLI 62
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_HALSA (Nucleoside diphosphate kinase OS=Halobacterium salinarium GN=ndk PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.779e-13 Identity = 31/61 (50.82%), Postives = 42/61 (68.85%), Query Frame = 1 Query: 142 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 E+TF+M+KPDGVQRGL+G+I+ R E KG + G K M +D A +HY + KPFF L+ Sbjct: 6 ERTFVMVKPDGVQRGLIGDIVTRLETKGLKMVGGKFMRIDEELAHEHYAEHEDKPFFDGLV 66
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_HALS3 (Nucleoside diphosphate kinase OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=ndk PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.779e-13 Identity = 31/61 (50.82%), Postives = 42/61 (68.85%), Query Frame = 1 Query: 142 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 E+TF+M+KPDGVQRGL+G+I+ R E KG + G K M +D A +HY + KPFF L+ Sbjct: 6 ERTFVMVKPDGVQRGLIGDIVTRLETKGLKMVGGKFMRIDEELAHEHYAEHEDKPFFDGLV 66
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_GINCI (Nucleoside diphosphate kinase (Fragment) OS=Ginglymostoma cirratum PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.779e-13 Identity = 34/61 (55.74%), Postives = 44/61 (72.13%), Query Frame = 1 Query: 142 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 E+TFI +KPDGVQR +VGE+I RFE+KGF L +K + + EKHY +LS KPF+ LI Sbjct: 4 ERTFIAVKPDGVQRCIVGEVIKRFEQKGFKLVAMKFLQAPKDLLEKHYCELSDKPFYPKLI 64
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_SULAC (Nucleoside diphosphate kinase OS=Sulfolobus acidocaldarius GN=ndk PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.630e-13 Identity = 34/62 (54.84%), Postives = 48/62 (77.42%), Query Frame = 1 Query: 139 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 +++TF+MIKPDGV+R LVGEII RFEK+GF++ LK++ +DR AE+ Y++ K FF LI Sbjct: 3 LQRTFVMIKPDGVRRRLVGEIISRFEKRGFNILALKMVHMDRATAERLYQEHKGKGFFNELI 64
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_PROM9 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9312) GN=ndk PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.630e-13 Identity = 36/61 (59.02%), Postives = 42/61 (68.85%), Query Frame = 1 Query: 142 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 E+TFI IKPDGVQRG V EII RFEKKGF L GLK + + A+ HY +PFFG L+ Sbjct: 4 ERTFIAIKPDGVQRGYVSEIIGRFEKKGFKLVGLKQLIPSKDLAQNHYGVHRERPFFGDLV 64
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_PROM2 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9215) GN=ndk PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.630e-13 Identity = 36/61 (59.02%), Postives = 42/61 (68.85%), Query Frame = 1 Query: 142 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 E+TFI IKPDGVQRG V EII RFEKKGF L GLK + + A+ HY +PFFG L+ Sbjct: 4 ERTFIAIKPDGVQRGYVAEIIGRFEKKGFKLVGLKQLIPSKDLAQNHYGVHRERPFFGDLV 64
BLAST of CX309020 vs. ExPASy Swiss-Prot
Match: NDK_PROM0 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9301) GN=ndk PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.630e-13 Identity = 36/61 (59.02%), Postives = 42/61 (68.85%), Query Frame = 1 Query: 142 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLI 324 E+TFI IKPDGVQRG V EII RFEKKGF L GLK + + A+ HY +PFFG L+ Sbjct: 4 ERTFIAIKPDGVQRGYVSEIIGRFEKKGFKLVGLKQLIPSKELAQNHYGVHRERPFFGDLV 64 The following BLAST results are available for this feature:
BLAST of CX309020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 230
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Sequences
The
following sequences are available for this feature:
EST sequence >CX309020 ID=CX309020; Name=CX309020; organism=Citrus clementina; type=EST; length=325bpback to top |